Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021353
(698 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_52117| Best HMM Match : No HMM Matches (HMM E-Value=.) 112 2e-25
SB_17507| Best HMM Match : SIR2 (HMM E-Value=0.00019) 95 4e-20
SB_43176| Best HMM Match : No HMM Matches (HMM E-Value=.) 83 3e-16
SB_11507| Best HMM Match : SIR2 (HMM E-Value=3.4e-11) 39 0.003
SB_39846| Best HMM Match : SIR2 (HMM E-Value=1.4013e-45) 37 0.018
SB_52409| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.024
SB_42699| Best HMM Match : SIR2 (HMM E-Value=1.6e-12) 31 0.90
SB_57034| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_57837| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_17981| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_54070| Best HMM Match : Phage_integr_N (HMM E-Value=0.041) 28 6.3
SB_49780| Best HMM Match : 7tm_1 (HMM E-Value=0.12) 28 6.3
SB_11499| Best HMM Match : C1_1 (HMM E-Value=1.5) 28 6.3
SB_9746| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_11292| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
>SB_52117| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 545
Score = 112 bits (270), Expect = 2e-25
Identities = 46/83 (55%), Positives = 65/83 (78%)
Frame = +2
Query: 260 IVRWIKSDRCKKIITLSGAGISTSAGIPDFRSPETGLYHNLQKYELPQPQAIFEINFFRQ 439
+V I+ ++CK II ++GAGIST +GIPDFR+P TGLY NLQ+Y +P+P AIF+I +F
Sbjct: 101 VVYLIREEKCKNIIVMAGAGISTPSGIPDFRTPGTGLYDNLQEYNIPEPTAIFDIEYFWY 160
Query: 440 NPKPFFTLAKELFPGSFKPTISH 508
+P+PFF LAK L+PG+++P H
Sbjct: 161 DPRPFFCLAKTLYPGNYQPNYVH 183
Score = 68.1 bits (159), Expect = 6e-12
Identities = 33/54 (61%), Positives = 41/54 (75%)
Frame = +1
Query: 508 YFIRLLHEKGLLLRHYTQNIDTLERGAGIPEEKLVEAHGILHITLSGIAARNTH 669
YF++LLH+KG LLR YTQNID LER AG+P EKLVEAHG T S I+ +++
Sbjct: 184 YFVKLLHDKGFLLRMYTQNIDGLERLAGLPAEKLVEAHGTFS-TASCISCHHSY 236
>SB_17507| Best HMM Match : SIR2 (HMM E-Value=0.00019)
Length = 202
Score = 95.5 bits (227), Expect = 4e-20
Identities = 41/60 (68%), Positives = 50/60 (83%)
Frame = +2
Query: 257 GIVRWIKSDRCKKIITLSGAGISTSAGIPDFRSPETGLYHNLQKYELPQPQAIFEINFFR 436
G+ +IKS +CK II ++GAGIST+AGIPDFRSP TGLY NLQKY LP P++IFEI +FR
Sbjct: 110 GVANYIKSGKCKHIIVMTGAGISTAAGIPDFRSPGTGLYDNLQKYNLPYPESIFEIGYFR 169
>SB_43176| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 639
Score = 82.6 bits (195), Expect = 3e-16
Identities = 42/74 (56%), Positives = 54/74 (72%), Gaps = 2/74 (2%)
Frame = +2
Query: 260 IVRWIKSDRCKKIITLSGAGISTSAGIPDFRSPETGLYHNLQ-KY-ELPQPQAIFEINFF 433
+VR IK +CK II L+GAG+S S GIPDFRS + G+Y L +Y +LP PQA+F+I +F
Sbjct: 111 VVRLIK--KCKNIIVLTGAGVSVSCGIPDFRSRD-GIYAKLSVEYPDLPDPQAMFDITYF 167
Query: 434 RQNPKPFFTLAKEL 475
QNPKPFF AK +
Sbjct: 168 NQNPKPFFKFAKNI 181
>SB_11507| Best HMM Match : SIR2 (HMM E-Value=3.4e-11)
Length = 813
Score = 39.1 bits (87), Expect = 0.003
Identities = 18/44 (40%), Positives = 30/44 (68%)
Frame = +2
Query: 290 KKIITLSGAGISTSAGIPDFRSPETGLYHNLQKYELPQPQAIFE 421
K+++ +GAG+ST+AGIPDFR P+ G++ +K P+ F+
Sbjct: 185 KRVVVHTGAGVSTAAGIPDFRGPK-GVWTLEEKGITPKIDVSFD 227
Score = 32.3 bits (70), Expect = 0.39
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +1
Query: 523 LHEKGLLLRHYTQNIDTLERGAGIPEEKLVEAHGILHI 636
L E+GL+ +QN+D L +G P KL E HG + +
Sbjct: 241 LQEEGLVHYVISQNVDGLHLKSGYPRSKLSELHGNMFV 278
>SB_39846| Best HMM Match : SIR2 (HMM E-Value=1.4013e-45)
Length = 427
Score = 36.7 bits (81), Expect = 0.018
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = +2
Query: 293 KIITLSGAGISTSAGIPDFRSPETGLY 373
KI ++GAGIST +GI D+RS GLY
Sbjct: 166 KIFVITGAGISTESGIRDYRSEGKGLY 192
>SB_52409| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 473
Score = 36.3 bits (80), Expect = 0.024
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = +1
Query: 559 QNIDTLERGAGIPEEKLVEAHGILH 633
+NIDTLER AGI + L+EAHG H
Sbjct: 299 ENIDTLERVAGITGDHLMEAHGSFH 323
Score = 33.1 bits (72), Expect = 0.22
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +2
Query: 440 NPKPFFTLAKELFPGSFK 493
NPKPFF AK ++PG FK
Sbjct: 253 NPKPFFVAAKAVYPGQFK 270
>SB_42699| Best HMM Match : SIR2 (HMM E-Value=1.6e-12)
Length = 501
Score = 31.1 bits (67), Expect = 0.90
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +1
Query: 514 IRLLHEKGLLLRHYTQNIDTLERGAGIPEEKLVEAHG 624
I L+++GL+ +QN D L +G+P + L E HG
Sbjct: 154 ITKLYQEGLVRHVVSQNCDGLHIRSGLPSQALSEVHG 190
>SB_57034| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 424
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Frame = +1
Query: 142 ISTWMTFECT---WP*NSDSSALRILNRQNHPKKFWMKSALWYCQV 270
+ W+ F+C+ WP N+D+ R+ +HPK F + + Y V
Sbjct: 353 LPNWIVFDCSVTQWPSNTDT---RMFPSSSHPKPFIFRPSFQYMYV 395
>SB_57837| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 551
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/43 (32%), Positives = 27/43 (62%)
Frame = -2
Query: 688 LSLTNSSGYSLRQSQTM*CVEFRVLRLIFLRECRLLALMCQCF 560
L+ NS+ ++R++ T VEFR+LR ++ E R+ ++ C+
Sbjct: 156 LNRLNSAKLAVRKTDTRDVVEFRILR-FYITEIRISTVIKTCY 197
>SB_17981| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1303
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +3
Query: 27 KMSANSPPGKSGGHETVDESPQNVPPTTSMES 122
K + SP G GH +V ++ +NVPP S S
Sbjct: 749 KGTVTSPSGSFAGHTSVYDNLENVPPPESCPS 780
>SB_54070| Best HMM Match : Phage_integr_N (HMM E-Value=0.041)
Length = 988
Score = 28.3 bits (60), Expect = 6.3
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +1
Query: 565 IDTLERGAGIPEEKLVEAHGIL 630
IDT+ R A +PEEKL + G+L
Sbjct: 556 IDTVNRIAKLPEEKLADIRGLL 577
>SB_49780| Best HMM Match : 7tm_1 (HMM E-Value=0.12)
Length = 345
Score = 28.3 bits (60), Expect = 6.3
Identities = 9/31 (29%), Positives = 19/31 (61%)
Frame = -2
Query: 619 VLRLIFLRECRLLALMCQCFVYNDVIRALSH 527
++ + + C +++ +C CF+Y V R +SH
Sbjct: 92 IVSALSITVCFMVSAVCYCFIYRVVRRQISH 122
>SB_11499| Best HMM Match : C1_1 (HMM E-Value=1.5)
Length = 572
Score = 28.3 bits (60), Expect = 6.3
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 8/82 (9%)
Frame = +1
Query: 394 TTSTTGDIRNKFLQAKSQTFLHISKGIISRKL*AYNFTYF------IRLLHEK--GLLLR 549
+T TGD+ L K+ T + + + + YF ++L + K G L
Sbjct: 239 STLDTGDLETWLLGTKNITRVRNHDELCAARAIVIGMAYFTMDPDYVKLYNPKDGGTRLS 298
Query: 550 HYTQNIDTLERGAGIPEEKLVE 615
T+ L R AG+PE++L E
Sbjct: 299 LQTERARALHRDAGVPEDRLYE 320
>SB_9746| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 70
Score = 28.3 bits (60), Expect = 6.3
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +1
Query: 565 IDTLERGAGIPEEKLVEAHGIL 630
IDT+ R A +PEEKL + G+L
Sbjct: 47 IDTVNRIAKLPEEKLADIRGLL 68
>SB_11292| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1529
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = -2
Query: 697 ANILSLTNSSGYSLRQSQT 641
ANIL N GYSLRQS+T
Sbjct: 765 ANILPPKNQCGYSLRQSRT 783
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,304,198
Number of Sequences: 59808
Number of extensions: 501833
Number of successful extensions: 1203
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1145
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1202
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1829596184
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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