Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021352
(692 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC337.08c |ubi4||ubiquitin|Schizosaccharomyces pombe|chr 2|||M... 145 6e-36
SPAC1805.12c |uep1|ubi2|ribosomal-ubiquitin fusion protein Ubi2|... 102 6e-23
SPAC11G7.04 |ubi1||ribosomal-ubiquitin fusion protein Ubi1|Schiz... 102 6e-23
SPAC6G10.11c |ubi3||ribosomal ubiquitin fusion protein Ubi3|Schi... 102 6e-23
SPAC589.10c |||ribomal-ubiquitin fusion protein Ubi5|Schizosacch... 102 6e-23
SPBC12D12.08c |ned8|nedd8, ubl1, SPBC24C6.01c|ubiquitin-like pro... 69 6e-13
SPAC6G9.08 |ubp6||ubiquitin C-terminal hydrolase Ubp6|Schizosacc... 38 0.001
SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyc... 31 0.21
SPAC31G5.11 |pac2||cAMP-independent regulatory protein Pac2 |Sch... 29 0.48
SPACUNK4.17 |||NAD binding dehydrogenase family protein|Schizosa... 28 1.5
SPAC20G4.08 ||SPAC4F10.01|sequence orphan|Schizosaccharomyces po... 28 1.5
SPBC1E8.02 |||ubiquitin family protein, unknown|Schizosaccharomy... 27 2.6
SPCC330.11 |btb1||BTB/POZ domain protein Btb1|Schizosaccharomyce... 27 2.6
SPBC31E1.01c |atg2|mug36, SPBC660.18c|autophagy associated prote... 27 3.4
SPAC17H9.02 |||ATP-dependent RNA helicase Mtr4-like |Schizosacch... 26 5.9
SPAC1851.04c ||SPAC27D7.01c|guanyl-nucleotide exchange factor |S... 26 5.9
SPCC584.15c |||arrestin/PY protein 2|Schizosaccharomyces pombe|c... 26 5.9
SPAC343.11c |msc1||multi-copy suppressor of Chk1 |Schizosaccharo... 25 7.9
SPBC1347.04 |tim54||TIM22 inner membrane protein import complex ... 25 7.9
>SPBC337.08c |ubi4||ubiquitin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 382
Score = 145 bits (351), Expect = 6e-36
Identities = 76/112 (67%), Positives = 86/112 (76%), Gaps = 1/112 (0%)
Frame = +1
Query: 358 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLETDAPCQTTT 537
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLE
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 538 FKKNPTPSCIAPSWRHAD-FVKTLTGKTITLEVEASDTIENVKARFXDQEGI 690
+K T + FVKTLTGKTITLEVE+SDTI+NVK++ D+EGI
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGI 112
Score = 145 bits (351), Expect = 6e-36
Identities = 76/112 (67%), Positives = 86/112 (76%), Gaps = 1/112 (0%)
Frame = +1
Query: 358 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLETDAPCQTTT 537
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLE
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 538 FKKNPTPSCIAPSWRHAD-FVKTLTGKTITLEVEASDTIENVKARFXDQEGI 690
+K T + FVKTLTGKTITLEVE+SDTI+NVK++ D+EGI
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGI 188
Score = 145 bits (351), Expect = 6e-36
Identities = 76/112 (67%), Positives = 86/112 (76%), Gaps = 1/112 (0%)
Frame = +1
Query: 358 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLETDAPCQTTT 537
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLE
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 538 FKKNPTPSCIAPSWRHAD-FVKTLTGKTITLEVEASDTIENVKARFXDQEGI 690
+K T + FVKTLTGKTITLEVE+SDTI+NVK++ D+EGI
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGI 264
Score = 145 bits (351), Expect = 6e-36
Identities = 76/112 (67%), Positives = 86/112 (76%), Gaps = 1/112 (0%)
Frame = +1
Query: 358 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLETDAPCQTTT 537
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLE
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 538 FKKNPTPSCIAPSWRHAD-FVKTLTGKTITLEVEASDTIENVKARFXDQEGI 690
+K T + FVKTLTGKTITLEVE+SDTI+NVK++ D+EGI
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGI 340
Score = 102 bits (244), Expect = 6e-23
Identities = 50/66 (75%), Positives = 54/66 (81%)
Frame = +1
Query: 358 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLETDAPCQTTT 537
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLE
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 538 FKKNPT 555
+K T
Sbjct: 365 IQKEST 370
Score = 81.4 bits (192), Expect = 1e-16
Identities = 38/41 (92%), Positives = 40/41 (97%)
Frame = +3
Query: 132 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQ 254
MQIFVKTLTGKTITLEVE SDTI+NVK+KIQDKEGIPPDQQ
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQ 41
Score = 81.4 bits (192), Expect = 1e-16
Identities = 38/41 (92%), Positives = 40/41 (97%)
Frame = +3
Query: 132 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQ 254
MQIFVKTLTGKTITLEVE SDTI+NVK+KIQDKEGIPPDQQ
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQ 117
Score = 81.4 bits (192), Expect = 1e-16
Identities = 38/41 (92%), Positives = 40/41 (97%)
Frame = +3
Query: 132 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQ 254
MQIFVKTLTGKTITLEVE SDTI+NVK+KIQDKEGIPPDQQ
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQ 193
Score = 81.4 bits (192), Expect = 1e-16
Identities = 38/41 (92%), Positives = 40/41 (97%)
Frame = +3
Query: 132 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQ 254
MQIFVKTLTGKTITLEVE SDTI+NVK+KIQDKEGIPPDQQ
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQ 269
Score = 81.4 bits (192), Expect = 1e-16
Identities = 38/41 (92%), Positives = 40/41 (97%)
Frame = +3
Query: 132 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQ 254
MQIFVKTLTGKTITLEVE SDTI+NVK+KIQDKEGIPPDQQ
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQ 345
Score = 77.4 bits (182), Expect = 2e-15
Identities = 54/115 (46%), Positives = 67/115 (58%), Gaps = 3/115 (2%)
Frame = +2
Query: 257 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGCRSS*KL*PERPSLWK*KLRTQLRM* 436
LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG + K + ++ + +
Sbjct: 43 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL--EVESSDTID 100
Query: 437 RRRSKTK-KEFLLINSVSSLLASSWRRTHLVRLQHS--KRIQLHLVLRLRGGMQI 592
+SK + KE + + + A ++ K LHLVLRLRGGMQI
Sbjct: 101 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQI 155
Score = 77.4 bits (182), Expect = 2e-15
Identities = 54/115 (46%), Positives = 67/115 (58%), Gaps = 3/115 (2%)
Frame = +2
Query: 257 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGCRSS*KL*PERPSLWK*KLRTQLRM* 436
LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG + K + ++ + +
Sbjct: 195 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL--EVESSDTID 252
Query: 437 RRRSKTK-KEFLLINSVSSLLASSWRRTHLVRLQHS--KRIQLHLVLRLRGGMQI 592
+SK + KE + + + A ++ K LHLVLRLRGGMQI
Sbjct: 253 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQI 307
Score = 72.5 bits (170), Expect = 5e-14
Identities = 51/113 (45%), Positives = 65/113 (57%), Gaps = 3/113 (2%)
Frame = +2
Query: 257 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGCRSS*KL*PERPSLWK*KLRTQLRM* 436
LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG + K + + + + +
Sbjct: 271 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE--VESSDTID 328
Query: 437 RRRSKTK-KEFLLINSVSSLLASSWRRTHLVRLQHS--KRIQLHLVLRLRGGM 586
+SK + KE + + + A ++ K LHLVLRLRGG+
Sbjct: 329 NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGL 381
>SPAC1805.12c |uep1|ubi2|ribosomal-ubiquitin fusion protein
Ubi2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 128
Score = 102 bits (244), Expect = 6e-23
Identities = 50/66 (75%), Positives = 54/66 (81%)
Frame = +1
Query: 358 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLETDAPCQTTT 537
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLE
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 538 FKKNPT 555
+K T
Sbjct: 61 IQKEST 66
Score = 81.4 bits (192), Expect = 1e-16
Identities = 38/41 (92%), Positives = 40/41 (97%)
Frame = +3
Query: 132 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQ 254
MQIFVKTLTGKTITLEVE SDTI+NVK+KIQDKEGIPPDQQ
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQ 41
Score = 72.5 bits (170), Expect = 5e-14
Identities = 34/34 (100%), Positives = 34/34 (100%)
Frame = +2
Query: 257 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 358
LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 43 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
Score = 57.6 bits (133), Expect = 2e-09
Identities = 26/33 (78%), Positives = 31/33 (93%)
Frame = +1
Query: 592 FVKTLTGKTITLEVEASDTIENVKARFXDQEGI 690
FVKTLTGKTITLEVE+SDTI+NVK++ D+EGI
Sbjct: 4 FVKTLTGKTITLEVESSDTIDNVKSKIQDKEGI 36
Score = 25.4 bits (53), Expect = 7.9
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = +2
Query: 542 KRIQLHLVLRLRGGM 586
K LHLVLRLRGG+
Sbjct: 63 KESTLHLVLRLRGGI 77
>SPAC11G7.04 |ubi1||ribosomal-ubiquitin fusion protein
Ubi1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 128
Score = 102 bits (244), Expect = 6e-23
Identities = 50/66 (75%), Positives = 54/66 (81%)
Frame = +1
Query: 358 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLETDAPCQTTT 537
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLE
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 538 FKKNPT 555
+K T
Sbjct: 61 IQKEST 66
Score = 81.4 bits (192), Expect = 1e-16
Identities = 38/41 (92%), Positives = 40/41 (97%)
Frame = +3
Query: 132 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQ 254
MQIFVKTLTGKTITLEVE SDTI+NVK+KIQDKEGIPPDQQ
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQ 41
Score = 72.5 bits (170), Expect = 5e-14
Identities = 34/34 (100%), Positives = 34/34 (100%)
Frame = +2
Query: 257 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 358
LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 43 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
Score = 57.6 bits (133), Expect = 2e-09
Identities = 26/33 (78%), Positives = 31/33 (93%)
Frame = +1
Query: 592 FVKTLTGKTITLEVEASDTIENVKARFXDQEGI 690
FVKTLTGKTITLEVE+SDTI+NVK++ D+EGI
Sbjct: 4 FVKTLTGKTITLEVESSDTIDNVKSKIQDKEGI 36
Score = 25.4 bits (53), Expect = 7.9
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = +2
Query: 542 KRIQLHLVLRLRGGM 586
K LHLVLRLRGG+
Sbjct: 63 KESTLHLVLRLRGGI 77
>SPAC6G10.11c |ubi3||ribosomal ubiquitin fusion protein
Ubi3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 150
Score = 102 bits (244), Expect = 6e-23
Identities = 50/66 (75%), Positives = 54/66 (81%)
Frame = +1
Query: 358 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLETDAPCQTTT 537
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLE
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 538 FKKNPT 555
+K T
Sbjct: 61 IQKEST 66
Score = 81.4 bits (192), Expect = 1e-16
Identities = 38/41 (92%), Positives = 40/41 (97%)
Frame = +3
Query: 132 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQ 254
MQIFVKTLTGKTITLEVE SDTI+NVK+KIQDKEGIPPDQQ
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQ 41
Score = 72.5 bits (170), Expect = 5e-14
Identities = 34/34 (100%), Positives = 34/34 (100%)
Frame = +2
Query: 257 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 358
LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 43 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
Score = 57.6 bits (133), Expect = 2e-09
Identities = 26/33 (78%), Positives = 31/33 (93%)
Frame = +1
Query: 592 FVKTLTGKTITLEVEASDTIENVKARFXDQEGI 690
FVKTLTGKTITLEVE+SDTI+NVK++ D+EGI
Sbjct: 4 FVKTLTGKTITLEVESSDTIDNVKSKIQDKEGI 36
>SPAC589.10c |||ribomal-ubiquitin fusion protein
Ubi5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 150
Score = 102 bits (244), Expect = 6e-23
Identities = 50/66 (75%), Positives = 54/66 (81%)
Frame = +1
Query: 358 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLETDAPCQTTT 537
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLE
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 538 FKKNPT 555
+K T
Sbjct: 61 IQKEST 66
Score = 81.4 bits (192), Expect = 1e-16
Identities = 38/41 (92%), Positives = 40/41 (97%)
Frame = +3
Query: 132 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQ 254
MQIFVKTLTGKTITLEVE SDTI+NVK+KIQDKEGIPPDQQ
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQ 41
Score = 72.5 bits (170), Expect = 5e-14
Identities = 34/34 (100%), Positives = 34/34 (100%)
Frame = +2
Query: 257 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 358
LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 43 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
Score = 57.6 bits (133), Expect = 2e-09
Identities = 26/33 (78%), Positives = 31/33 (93%)
Frame = +1
Query: 592 FVKTLTGKTITLEVEASDTIENVKARFXDQEGI 690
FVKTLTGKTITLEVE+SDTI+NVK++ D+EGI
Sbjct: 4 FVKTLTGKTITLEVESSDTIDNVKSKIQDKEGI 36
>SPBC12D12.08c |ned8|nedd8, ubl1, SPBC24C6.01c|ubiquitin-like
protein modifier Ned8|Schizosaccharomyces pombe|chr
2|||Manual
Length = 78
Score = 68.9 bits (161), Expect = 6e-13
Identities = 29/53 (54%), Positives = 41/53 (77%)
Frame = +1
Query: 358 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLETD 516
M I VKTLTGK I L+++ +D + +K ++++KEGIPP QQRLI+AGKQ+ D
Sbjct: 1 MLIKVKTLTGKEIELDIDPNDKVSRIKERVEEKEGIPPSQQRLIYAGKQMADD 53
Score = 55.2 bits (127), Expect = 8e-09
Identities = 22/41 (53%), Positives = 32/41 (78%)
Frame = +3
Query: 132 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQ 254
M I VKTLTGK I L+++P+D + +K ++++KEGIPP QQ
Sbjct: 1 MLIKVKTLTGKEIELDIDPNDKVSRIKERVEEKEGIPPSQQ 41
Score = 41.9 bits (94), Expect = 8e-05
Identities = 18/34 (52%), Positives = 24/34 (70%)
Frame = +2
Query: 257 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 358
LI+AGKQ+ D + Y+++ S LHLVL LRGG
Sbjct: 43 LIYAGKQMADDKNAESYHLEGGSVLHLVLALRGG 76
Score = 37.5 bits (83), Expect = 0.002
Identities = 15/32 (46%), Positives = 23/32 (71%)
Frame = +1
Query: 595 VKTLTGKTITLEVEASDTIENVKARFXDQEGI 690
VKTLTGK I L+++ +D + +K R ++EGI
Sbjct: 5 VKTLTGKEIELDIDPNDKVSRIKERVEEKEGI 36
>SPAC6G9.08 |ubp6||ubiquitin C-terminal hydrolase
Ubp6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 467
Score = 38.3 bits (85), Expect = 0.001
Identities = 18/57 (31%), Positives = 31/57 (54%)
Frame = +1
Query: 385 GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLETDAPCQTTTFKKNPT 555
GK LE+E ++T +K ++ +PP++Q++I G QL+ D + K N T
Sbjct: 10 GKKYDLEIEPNETGSTLKHQLYSLTQVPPERQKVIVKGGQLKDDVLLGSVGIKPNAT 66
Score = 30.7 bits (66), Expect = 0.21
Identities = 15/55 (27%), Positives = 26/55 (47%)
Frame = +3
Query: 159 GKTITLEVEPSDTIENVKAKIQDKEGIPPDQQVSSLLASSWKTDAPCQTTTFKKN 323
GK LE+EP++T +K ++ +PP++Q + K D + K N
Sbjct: 10 GKKYDLEIEPNETGSTLKHQLYSLTQVPPERQKVIVKGGQLKDDVLLGSVGIKPN 64
>SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 354
Score = 30.7 bits (66), Expect = 0.21
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +2
Query: 257 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 349
LI+AG+ L+D +L Y IQ ++HLV L
Sbjct: 46 LIYAGRVLKDEESLKTYKIQDGHSIHLVKTL 76
Score = 27.9 bits (59), Expect = 1.5
Identities = 13/58 (22%), Positives = 30/58 (51%)
Frame = +1
Query: 358 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLETDAPCQT 531
+ + +K + + V++ ++ +K I I ++QRLI+AG+ L+ + +T
Sbjct: 4 ISLTIKAANDQKYAVTVDSESSVLALKEAIAPVADIEKERQRLIYAGRVLKDEESLKT 61
>SPAC31G5.11 |pac2||cAMP-independent regulatory protein Pac2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 235
Score = 29.5 bits (63), Expect = 0.48
Identities = 17/37 (45%), Positives = 19/37 (51%)
Frame = -3
Query: 549 ILFECCSLTRCVRLQLLASKDETLLIRRNSFFVLDLR 439
ILFE C + R+Q S E LIR S FV D R
Sbjct: 16 ILFEACRIGLLPRVQRRLSDHERSLIRAGSVFVWDER 52
>SPACUNK4.17 |||NAD binding dehydrogenase family
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 405
Score = 27.9 bits (59), Expect = 1.5
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +3
Query: 180 VEPSDTIENVKAKIQDKEGIPPDQQVSSLLASSWK 284
VE D + A D++ IPP++++ A+SWK
Sbjct: 265 VEWDDPSGKLNAMPVDEKTIPPEERIPRFTAASWK 299
>SPAC20G4.08 ||SPAC4F10.01|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1076
Score = 27.9 bits (59), Expect = 1.5
Identities = 15/59 (25%), Positives = 26/59 (44%)
Frame = +3
Query: 189 SDTIENVKAKIQDKEGIPPDQQVSSLLASSWKTDAPCQTTTFKKNPHSIWYCVFVEDAD 365
+ T E + A + E +P D + S ++A ++ A T K YC+ V + D
Sbjct: 567 NSTYELILASLNTSEPVPADAKFSVIVAKKFEKAACISFTACKILESEDKYCIVVSNTD 625
>SPBC1E8.02 |||ubiquitin family protein, unknown|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 603
Score = 27.1 bits (57), Expect = 2.6
Identities = 16/56 (28%), Positives = 27/56 (48%)
Frame = +1
Query: 361 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLETDAPCQ 528
+I V T+ K +V + T+ +K I P D+ +LI AG+ L + P +
Sbjct: 5 RIRVTTVDQKVGIFQVPRTKTVLELKELIAVTFEAPADRLKLIHAGRVLRNETPLE 60
>SPCC330.11 |btb1||BTB/POZ domain protein Btb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1347
Score = 27.1 bits (57), Expect = 2.6
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = +3
Query: 138 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQVSSLLASS 278
I+V L ++ L +PS +I+DKEG+ P Q +S +L+S+
Sbjct: 95 IYVGNLEAASLLLSKDPSFR----SLRIKDKEGLSPFQFLSRVLSST 137
>SPBC31E1.01c |atg2|mug36, SPBC660.18c|autophagy associated protein
Mug36|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1646
Score = 26.6 bits (56), Expect = 3.4
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = -3
Query: 606 QSFHEICMPPRRRNTRWSWILFECCSLTRCV 514
+SF+ + ++ TR SW++F+C R V
Sbjct: 293 ESFYSVHDSVTQKKTRTSWLIFQCSGEFRLV 323
>SPAC17H9.02 |||ATP-dependent RNA helicase Mtr4-like
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1030
Score = 25.8 bits (54), Expect = 5.9
Identities = 17/69 (24%), Positives = 28/69 (40%), Gaps = 4/69 (5%)
Frame = +1
Query: 463 IPPDQQRLIFAGKQLETDAPCQTTTFKKNPTPS----CIAPSWRHADFVKTLTGKTITLE 630
+ PD I K + +D P +T F+ +P S C+ T GKT+ E
Sbjct: 99 VVPDDYDYIPLNKHIPSDPPAKTYPFELDPFQSTAIKCVERMESVLVSAHTSAGKTVIAE 158
Query: 631 VEASDTIEN 657
+ ++N
Sbjct: 159 YAIAQALKN 167
>SPAC1851.04c ||SPAC27D7.01c|guanyl-nucleotide exchange factor
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1052
Score = 25.8 bits (54), Expect = 5.9
Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = +3
Query: 519 TLSDY-NIQKESNSILYCAFVEACRFRENSDRKDHHFGSRSFGHNRECEG 665
TLS Y N+ S+ Y F +C F + + GS++F E EG
Sbjct: 330 TLSPYLNLCCASSETEYFNFGLSCGFWDRDSSSFYGLGSKNFSSTGEAEG 379
>SPCC584.15c |||arrestin/PY protein 2|Schizosaccharomyces pombe|chr
3|||Manual
Length = 594
Score = 25.8 bits (54), Expect = 5.9
Identities = 11/40 (27%), Positives = 20/40 (50%)
Frame = +1
Query: 457 EGIPPDQQRLIFAGKQLETDAPCQTTTFKKNPTPSCIAPS 576
+G+P ++ + + P TTT +P P+ IAP+
Sbjct: 524 DGLPRYEEATRPSSPTESVEIPSNTTTIAPSPVPTIIAPA 563
>SPAC343.11c |msc1||multi-copy suppressor of Chk1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1588
Score = 25.4 bits (53), Expect = 7.9
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -1
Query: 242 RNSFFVLDLRLYILNCVRRFHF*CDGLAS 156
R F + D + NC+ FH+ C GL+S
Sbjct: 1460 RQPFAISDGTVQCHNCLEWFHYECVGLSS 1488
>SPBC1347.04 |tim54||TIM22 inner membrane protein import complex
subunit Tim54|Schizosaccharomyces pombe|chr 2|||Manual
Length = 347
Score = 25.4 bits (53), Expect = 7.9
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +3
Query: 249 QQVSSLLASSWKTDAPCQTTTFKKNPHSIWYCVFVEDAD 365
+Q +LL + +TD P Q T + IW F++D+D
Sbjct: 287 KQDGTLLLAEEETDWPKQFFTRSDLENRIWTAPFLQDSD 325
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,130,067
Number of Sequences: 5004
Number of extensions: 69444
Number of successful extensions: 307
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 228
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 289
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 321951680
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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