Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021352
(692 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_57838| Best HMM Match : No HMM Matches (HMM E-Value=.) 148 4e-36
SB_46051| Best HMM Match : ubiquitin (HMM E-Value=0) 148 4e-36
SB_25984| Best HMM Match : ubiquitin (HMM E-Value=0) 127 7e-30
SB_33021| Best HMM Match : No HMM Matches (HMM E-Value=.) 103 1e-22
SB_28758| Best HMM Match : ubiquitin (HMM E-Value=1.5e-29) 103 2e-22
SB_20850| Best HMM Match : ubiquitin (HMM E-Value=0.00037) 73 3e-13
SB_41074| Best HMM Match : ubiquitin (HMM E-Value=2.3e-10) 40 0.003
SB_49791| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.010
SB_25220| Best HMM Match : Ank (HMM E-Value=6.2e-11) 35 0.054
SB_56543| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.38
SB_40252| Best HMM Match : LRR_1 (HMM E-Value=8.2e-12) 32 0.51
SB_10325| Best HMM Match : ubiquitin (HMM E-Value=3.4e-05) 31 0.67
SB_1967| Best HMM Match : ubiquitin (HMM E-Value=4.7e-12) 31 0.89
SB_30857| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_23330| Best HMM Match : Ribosomal_L40e (HMM E-Value=1.8e-32) 30 2.0
SB_36390| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_29502| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_21723| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_5145| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_50629| Best HMM Match : Extensin_2 (HMM E-Value=0.94) 29 4.7
SB_22716| Best HMM Match : zf-CCHC (HMM E-Value=0.0097) 29 4.7
SB_19129| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7
SB_3245| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7
SB_59029| Best HMM Match : Pkinase (HMM E-Value=0) 28 6.2
SB_275| Best HMM Match : RibD_C (HMM E-Value=0.00017) 28 6.2
SB_56405| Best HMM Match : Fels1 (HMM E-Value=6.5) 28 6.2
SB_11656| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_52365| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
SB_24946| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
SB_18178| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
SB_14984| Best HMM Match : 7tm_1 (HMM E-Value=2.4e-06) 28 8.3
SB_5719| Best HMM Match : Helicase_C (HMM E-Value=1e-24) 28 8.3
>SB_57838| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 533
Score = 148 bits (359), Expect = 4e-36
Identities = 80/112 (71%), Positives = 84/112 (75%), Gaps = 1/112 (0%)
Frame = +1
Query: 358 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLETDAPCQTTT 537
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 538 FKKNPTPSCIAPSWRHAD-FVKTLTGKTITLEVEASDTIENVKARFXDQEGI 690
+K T + FVKTLTGKTITLEVE SDTIENVKA+ D+EGI
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGI 112
Score = 148 bits (359), Expect = 4e-36
Identities = 80/112 (71%), Positives = 84/112 (75%), Gaps = 1/112 (0%)
Frame = +1
Query: 358 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLETDAPCQTTT 537
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 538 FKKNPTPSCIAPSWRHAD-FVKTLTGKTITLEVEASDTIENVKARFXDQEGI 690
+K T + FVKTLTGKTITLEVE SDTIENVKA+ D+EGI
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGI 188
Score = 148 bits (359), Expect = 4e-36
Identities = 80/112 (71%), Positives = 84/112 (75%), Gaps = 1/112 (0%)
Frame = +1
Query: 358 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLETDAPCQTTT 537
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 538 FKKNPTPSCIAPSWRHAD-FVKTLTGKTITLEVEASDTIENVKARFXDQEGI 690
+K T + FVKTLTGKTITLEVE SDTIENVKA+ D+EGI
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGI 264
Score = 148 bits (359), Expect = 4e-36
Identities = 80/112 (71%), Positives = 84/112 (75%), Gaps = 1/112 (0%)
Frame = +1
Query: 358 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLETDAPCQTTT 537
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE
Sbjct: 229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 538 FKKNPTPSCIAPSWRHAD-FVKTLTGKTITLEVEASDTIENVKARFXDQEGI 690
+K T + FVKTLTGKTITLEVE SDTIENVKA+ D+EGI
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGI 340
Score = 148 bits (359), Expect = 4e-36
Identities = 80/112 (71%), Positives = 84/112 (75%), Gaps = 1/112 (0%)
Frame = +1
Query: 358 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLETDAPCQTTT 537
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 538 FKKNPTPSCIAPSWRHAD-FVKTLTGKTITLEVEASDTIENVKARFXDQEGI 690
+K T + FVKTLTGKTITLEVE SDTIENVKA+ D+EGI
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGI 416
Score = 148 bits (359), Expect = 4e-36
Identities = 80/112 (71%), Positives = 84/112 (75%), Gaps = 1/112 (0%)
Frame = +1
Query: 358 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLETDAPCQTTT 537
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE
Sbjct: 381 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 538 FKKNPTPSCIAPSWRHAD-FVKTLTGKTITLEVEASDTIENVKARFXDQEGI 690
+K T + FVKTLTGKTITLEVE SDTIENVKA+ D+EGI
Sbjct: 441 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGI 492
Score = 103 bits (248), Expect = 1e-22
Identities = 52/66 (78%), Positives = 53/66 (80%)
Frame = +1
Query: 358 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLETDAPCQTTT 537
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE
Sbjct: 457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 538 FKKNPT 555
+K T
Sbjct: 517 IQKEST 522
Score = 87.0 bits (206), Expect = 1e-17
Identities = 41/41 (100%), Positives = 41/41 (100%)
Frame = +3
Query: 132 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQ 254
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQ
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQ 41
Score = 87.0 bits (206), Expect = 1e-17
Identities = 41/41 (100%), Positives = 41/41 (100%)
Frame = +3
Query: 132 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQ 254
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQ
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQ 117
Score = 87.0 bits (206), Expect = 1e-17
Identities = 41/41 (100%), Positives = 41/41 (100%)
Frame = +3
Query: 132 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQ 254
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQ
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQ 193
Score = 87.0 bits (206), Expect = 1e-17
Identities = 41/41 (100%), Positives = 41/41 (100%)
Frame = +3
Query: 132 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQ 254
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQ
Sbjct: 229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQ 269
Score = 87.0 bits (206), Expect = 1e-17
Identities = 41/41 (100%), Positives = 41/41 (100%)
Frame = +3
Query: 132 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQ 254
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQ
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQ 345
Score = 87.0 bits (206), Expect = 1e-17
Identities = 41/41 (100%), Positives = 41/41 (100%)
Frame = +3
Query: 132 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQ 254
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQ
Sbjct: 381 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQ 421
Score = 87.0 bits (206), Expect = 1e-17
Identities = 41/41 (100%), Positives = 41/41 (100%)
Frame = +3
Query: 132 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQ 254
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQ
Sbjct: 457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQ 497
Score = 77.0 bits (181), Expect = 1e-14
Identities = 52/114 (45%), Positives = 65/114 (57%), Gaps = 2/114 (1%)
Frame = +2
Query: 257 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGCRSS*KL*PERPSLWK*KLRTQLRM* 436
LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG + K + + + +
Sbjct: 43 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 102
Query: 437 RRRSKTKKEFLLINSVSSLLASSWRRTHLVRLQHS--KRIQLHLVLRLRGGMQI 592
+ + + KE + + + A ++ K LHLVLRLRGGMQI
Sbjct: 103 KAKIQ-DKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQI 155
Score = 77.0 bits (181), Expect = 1e-14
Identities = 52/114 (45%), Positives = 65/114 (57%), Gaps = 2/114 (1%)
Frame = +2
Query: 257 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGCRSS*KL*PERPSLWK*KLRTQLRM* 436
LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG + K + + + +
Sbjct: 195 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 254
Query: 437 RRRSKTKKEFLLINSVSSLLASSWRRTHLVRLQHS--KRIQLHLVLRLRGGMQI 592
+ + + KE + + + A ++ K LHLVLRLRGGMQI
Sbjct: 255 KAKIQ-DKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQI 307
Score = 77.0 bits (181), Expect = 1e-14
Identities = 52/114 (45%), Positives = 65/114 (57%), Gaps = 2/114 (1%)
Frame = +2
Query: 257 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGCRSS*KL*PERPSLWK*KLRTQLRM* 436
LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG + K + + + +
Sbjct: 347 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 406
Query: 437 RRRSKTKKEFLLINSVSSLLASSWRRTHLVRLQHS--KRIQLHLVLRLRGGMQI 592
+ + + KE + + + A ++ K LHLVLRLRGGMQI
Sbjct: 407 KAKIQ-DKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQI 459
Score = 72.5 bits (170), Expect = 3e-13
Identities = 34/34 (100%), Positives = 34/34 (100%)
Frame = +2
Query: 257 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 358
LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 499 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 532
>SB_46051| Best HMM Match : ubiquitin (HMM E-Value=0)
Length = 381
Score = 148 bits (359), Expect = 4e-36
Identities = 80/112 (71%), Positives = 84/112 (75%), Gaps = 1/112 (0%)
Frame = +1
Query: 358 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLETDAPCQTTT 537
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 538 FKKNPTPSCIAPSWRHAD-FVKTLTGKTITLEVEASDTIENVKARFXDQEGI 690
+K T + FVKTLTGKTITLEVE SDTIENVKA+ D+EGI
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGI 112
Score = 148 bits (359), Expect = 4e-36
Identities = 80/112 (71%), Positives = 84/112 (75%), Gaps = 1/112 (0%)
Frame = +1
Query: 358 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLETDAPCQTTT 537
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 538 FKKNPTPSCIAPSWRHAD-FVKTLTGKTITLEVEASDTIENVKARFXDQEGI 690
+K T + FVKTLTGKTITLEVE SDTIENVKA+ D+EGI
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGI 188
Score = 148 bits (359), Expect = 4e-36
Identities = 80/112 (71%), Positives = 84/112 (75%), Gaps = 1/112 (0%)
Frame = +1
Query: 358 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLETDAPCQTTT 537
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 538 FKKNPTPSCIAPSWRHAD-FVKTLTGKTITLEVEASDTIENVKARFXDQEGI 690
+K T + FVKTLTGKTITLEVE SDTIENVKA+ D+EGI
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGI 264
Score = 148 bits (359), Expect = 4e-36
Identities = 80/112 (71%), Positives = 84/112 (75%), Gaps = 1/112 (0%)
Frame = +1
Query: 358 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLETDAPCQTTT 537
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE
Sbjct: 229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 538 FKKNPTPSCIAPSWRHAD-FVKTLTGKTITLEVEASDTIENVKARFXDQEGI 690
+K T + FVKTLTGKTITLEVE SDTIENVKA+ D+EGI
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGI 340
Score = 103 bits (248), Expect = 1e-22
Identities = 52/66 (78%), Positives = 53/66 (80%)
Frame = +1
Query: 358 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLETDAPCQTTT 537
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 538 FKKNPT 555
+K T
Sbjct: 365 IQKEST 370
Score = 87.0 bits (206), Expect = 1e-17
Identities = 41/41 (100%), Positives = 41/41 (100%)
Frame = +3
Query: 132 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQ 254
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQ
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQ 41
Score = 87.0 bits (206), Expect = 1e-17
Identities = 41/41 (100%), Positives = 41/41 (100%)
Frame = +3
Query: 132 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQ 254
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQ
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQ 117
Score = 87.0 bits (206), Expect = 1e-17
Identities = 41/41 (100%), Positives = 41/41 (100%)
Frame = +3
Query: 132 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQ 254
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQ
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQ 193
Score = 87.0 bits (206), Expect = 1e-17
Identities = 41/41 (100%), Positives = 41/41 (100%)
Frame = +3
Query: 132 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQ 254
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQ
Sbjct: 229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQ 269
Score = 87.0 bits (206), Expect = 1e-17
Identities = 41/41 (100%), Positives = 41/41 (100%)
Frame = +3
Query: 132 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQ 254
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQ
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQ 345
Score = 77.0 bits (181), Expect = 1e-14
Identities = 52/114 (45%), Positives = 65/114 (57%), Gaps = 2/114 (1%)
Frame = +2
Query: 257 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGCRSS*KL*PERPSLWK*KLRTQLRM* 436
LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG + K + + + +
Sbjct: 43 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 102
Query: 437 RRRSKTKKEFLLINSVSSLLASSWRRTHLVRLQHS--KRIQLHLVLRLRGGMQI 592
+ + + KE + + + A ++ K LHLVLRLRGGMQI
Sbjct: 103 KAKIQ-DKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQI 155
Score = 77.0 bits (181), Expect = 1e-14
Identities = 52/114 (45%), Positives = 65/114 (57%), Gaps = 2/114 (1%)
Frame = +2
Query: 257 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGCRSS*KL*PERPSLWK*KLRTQLRM* 436
LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG + K + + + +
Sbjct: 195 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 254
Query: 437 RRRSKTKKEFLLINSVSSLLASSWRRTHLVRLQHS--KRIQLHLVLRLRGGMQI 592
+ + + KE + + + A ++ K LHLVLRLRGGMQI
Sbjct: 255 KAKIQ-DKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQI 307
Score = 72.5 bits (170), Expect = 3e-13
Identities = 34/34 (100%), Positives = 34/34 (100%)
Frame = +2
Query: 257 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 358
LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 347 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 380
>SB_25984| Best HMM Match : ubiquitin (HMM E-Value=0)
Length = 147
Score = 127 bits (307), Expect = 7e-30
Identities = 68/111 (61%), Positives = 76/111 (68%)
Frame = +1
Query: 358 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLETDAPCQTTT 537
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 538 FKKNPTPSCIAPSWRHADFVKTLTGKTITLEVEASDTIENVKARFXDQEGI 690
+K T + KT TL+VEASDT+E+VK + ++EGI
Sbjct: 61 IQKESTLHLVLRLRGGMQISVKAHWKTFTLDVEASDTVESVKEKIQNREGI 111
Score = 87.0 bits (206), Expect = 1e-17
Identities = 41/41 (100%), Positives = 41/41 (100%)
Frame = +3
Query: 132 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQ 254
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQ
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQ 41
Score = 73.7 bits (173), Expect = 1e-13
Identities = 36/40 (90%), Positives = 37/40 (92%)
Frame = +2
Query: 257 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGCRSS*K 376
LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG + S K
Sbjct: 43 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQISVK 82
Score = 59.7 bits (138), Expect = 2e-09
Identities = 30/50 (60%), Positives = 39/50 (78%)
Frame = +1
Query: 358 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL 507
MQI VK KT TL+VEASDT+E+VK KIQ++EGIPP QRL++ ++L
Sbjct: 77 MQISVKA-HWKTFTLDVEASDTVESVKEKIQNREGIPPKVQRLLYEEEEL 125
Score = 50.4 bits (115), Expect = 1e-06
Identities = 26/41 (63%), Positives = 31/41 (75%)
Frame = +3
Query: 132 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQ 254
MQI VK KT TL+VE SDT+E+VK KIQ++EGIPP Q
Sbjct: 77 MQISVKA-HWKTFTLDVEASDTVESVKEKIQNREGIPPKVQ 116
Score = 33.5 bits (73), Expect = 0.17
Identities = 14/29 (48%), Positives = 22/29 (75%)
Frame = +2
Query: 257 LIFAGKQLEDGRTLSDYNIQKESTLHLVL 343
L++ ++L D R+L+DYNI++ S LHL L
Sbjct: 118 LLYEEEELVDNRSLADYNIKQGSILHLFL 146
>SB_33021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 157
Score = 103 bits (248), Expect = 1e-22
Identities = 52/66 (78%), Positives = 53/66 (80%)
Frame = +1
Query: 358 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLETDAPCQTTT 537
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 538 FKKNPT 555
+K T
Sbjct: 61 IQKEST 66
Score = 87.0 bits (206), Expect = 1e-17
Identities = 41/41 (100%), Positives = 41/41 (100%)
Frame = +3
Query: 132 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQ 254
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQ
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQ 41
Score = 73.3 bits (172), Expect = 2e-13
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +2
Query: 257 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGCR 364
LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG +
Sbjct: 43 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGAK 78
Score = 59.3 bits (137), Expect = 3e-09
Identities = 28/33 (84%), Positives = 30/33 (90%)
Frame = +1
Query: 592 FVKTLTGKTITLEVEASDTIENVKARFXDQEGI 690
FVKTLTGKTITLEVE SDTIENVKA+ D+EGI
Sbjct: 4 FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGI 36
>SB_28758| Best HMM Match : ubiquitin (HMM E-Value=1.5e-29)
Length = 142
Score = 103 bits (246), Expect = 2e-22
Identities = 50/51 (98%), Positives = 50/51 (98%)
Frame = +1
Query: 358 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE 510
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE
Sbjct: 79 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE 129
Score = 87.0 bits (206), Expect = 1e-17
Identities = 41/41 (100%), Positives = 41/41 (100%)
Frame = +3
Query: 132 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQ 254
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQ
Sbjct: 79 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQ 119
Score = 59.3 bits (137), Expect = 3e-09
Identities = 28/33 (84%), Positives = 30/33 (90%)
Frame = +1
Query: 592 FVKTLTGKTITLEVEASDTIENVKARFXDQEGI 690
FVKTLTGKTITLEVE SDTIENVKA+ D+EGI
Sbjct: 82 FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGI 114
Score = 46.8 bits (106), Expect = 2e-05
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +2
Query: 257 LIFAGKQLEDGRTLSDYNIQK 319
LIFAGKQLEDGRTLSDYNIQK
Sbjct: 121 LIFAGKQLEDGRTLSDYNIQK 141
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +3
Query: 510 DGRTLSDYNIQK 545
DGRTLSDYNIQK
Sbjct: 130 DGRTLSDYNIQK 141
>SB_20850| Best HMM Match : ubiquitin (HMM E-Value=0.00037)
Length = 150
Score = 72.5 bits (170), Expect = 3e-13
Identities = 34/34 (100%), Positives = 34/34 (100%)
Frame = +2
Query: 257 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 358
LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 9 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 42
Score = 37.9 bits (84), Expect = 0.008
Identities = 18/31 (58%), Positives = 19/31 (61%)
Frame = +1
Query: 463 IPPDQQRLIFAGKQLETDAPCQTTTFKKNPT 555
IPPDQQRLIFAGKQLE +K T
Sbjct: 2 IPPDQQRLIFAGKQLEDGRTLSDYNIQKEST 32
>SB_41074| Best HMM Match : ubiquitin (HMM E-Value=2.3e-10)
Length = 333
Score = 39.5 bits (88), Expect = 0.003
Identities = 23/52 (44%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Frame = +1
Query: 364 IFVKTLTGKTITLEVEA-SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLETD 516
I V TLTG+ I + ++ TI VK I+ K G P DQQRL+F G+ L +
Sbjct: 73 IAVLTLTGERILIPFKSPKHTIIEVKYLIEAKGGYPKDQQRLVFNGQVLSDE 124
Score = 31.9 bits (69), Expect = 0.51
Identities = 19/52 (36%), Positives = 27/52 (51%)
Frame = +2
Query: 203 ECKGEDPRQRRNSS*STGLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 358
E KG P+ ++ L+F G+ L D T I +TLHL++RL GG
Sbjct: 102 EAKGGYPKDQQR------LVFNGQVLSDEDTFEKVGIFAGATLHLIVRLLGG 147
Score = 31.5 bits (68), Expect = 0.67
Identities = 19/40 (47%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +3
Query: 138 IFVKTLTGKTITLEVE-PSDTIENVKAKIQDKEGIPPDQQ 254
I V TLTG+ I + + P TI VK I+ K G P DQQ
Sbjct: 73 IAVLTLTGERILIPFKSPKHTIIEVKYLIEAKGGYPKDQQ 112
>SB_49791| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 35
Score = 37.5 bits (83), Expect = 0.010
Identities = 17/34 (50%), Positives = 23/34 (67%)
Frame = +3
Query: 132 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKE 233
M ++++TLTG L V P +TI +VKAKIQ E
Sbjct: 1 MDLYIQTLTGTAFELRVSPFETIMSVKAKIQRLE 34
Score = 34.3 bits (75), Expect = 0.095
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = +1
Query: 358 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 459
M ++++TLTG L V +TI +VKAKIQ E
Sbjct: 1 MDLYIQTLTGTAFELRVSPFETIMSVKAKIQRLE 34
>SB_25220| Best HMM Match : Ank (HMM E-Value=6.2e-11)
Length = 744
Score = 35.1 bits (77), Expect = 0.054
Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +1
Query: 361 QIFVKTLTGKTITLEVEASDT-IENVKAKIQDKEGIPPDQQRLIFAGKQLETDAPCQTTT 537
Q+F T TL +D + +K++I+ K GIP D QRL F K+L DA
Sbjct: 7 QVFAALPTEDVCTLRDLTTDMHVFQLKSRIELKTGIPGDIQRLHFMNKELYDDATLAKVN 66
Query: 538 FKK 546
K+
Sbjct: 67 LKQ 69
>SB_56543| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1076
Score = 32.3 bits (70), Expect = 0.38
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +1
Query: 382 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGK 501
+G L++ + TIE ++ ++ DK G PP QR I K
Sbjct: 44 SGGAFNLQIPLNTTIEKLQNEVADKYGFPPKVQRWIIGKK 83
>SB_40252| Best HMM Match : LRR_1 (HMM E-Value=8.2e-12)
Length = 481
Score = 31.9 bits (69), Expect = 0.51
Identities = 26/83 (31%), Positives = 44/83 (53%)
Frame = +1
Query: 277 AGRRTHLVRLQHSKRIHTPSGTASSWRMQIFVKTLTGKTITLEVEASDTIENVKAKIQDK 456
AG THL LQ++K I G R+ L G +IT+ +E D +EN++ +K
Sbjct: 72 AGNLTHLY-LQNNK-ISRIEGLDHCRRLSKLY--LGGNSITV-IEGLDKLENLRELHMEK 126
Query: 457 EGIPPDQQRLIFAGKQLETDAPC 525
+ +PP ++L+F + L+ + C
Sbjct: 127 QHLPPG-EKLLFDPRTLQALSKC 148
>SB_10325| Best HMM Match : ubiquitin (HMM E-Value=3.4e-05)
Length = 198
Score = 31.5 bits (68), Expect = 0.67
Identities = 27/102 (26%), Positives = 42/102 (41%), Gaps = 1/102 (0%)
Frame = +1
Query: 358 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLETDAPCQTTT 537
MQ+ VKTL +T T V +EGIP ++QRLIF GK L+ + +
Sbjct: 1 MQVTVKTLDSETRTFTVS--------------EEGIPAERQRLIFKGKVLQDEKKLKEFD 46
Query: 538 FKKN-PTPSCIAPSWRHADFVKTLTGKTITLEVEASDTIENV 660
N P + P + A + + V+ +N+
Sbjct: 47 GASNSPDGPSVHPGSQAASSAANIVMGAFNMPVDVMGISQNI 88
>SB_1967| Best HMM Match : ubiquitin (HMM E-Value=4.7e-12)
Length = 348
Score = 31.1 bits (67), Expect = 0.89
Identities = 21/78 (26%), Positives = 34/78 (43%), Gaps = 1/78 (1%)
Frame = +1
Query: 358 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLETDAPCQTT- 534
M++ V G TL+V +EN +A ++ + G+P + L G QL T
Sbjct: 1 MKVTVTGEDGSIFTLDVSVDLEVENFRALLEFESGVPASEISLYHDGVQLSDLKKTLTAY 60
Query: 535 TFKKNPTPSCIAPSWRHA 588
+ K+N + RHA
Sbjct: 61 SVKENDVILMVRRQARHA 78
>SB_30857| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 48
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +2
Query: 320 ESTLHLVLRLRGG 358
ESTLHLVLRLRGG
Sbjct: 14 ESTLHLVLRLRGG 26
>SB_23330| Best HMM Match : Ribosomal_L40e (HMM E-Value=1.8e-32)
Length = 78
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +2
Query: 320 ESTLHLVLRLRGG 358
ESTLHLVLRLRGG
Sbjct: 14 ESTLHLVLRLRGG 26
>SB_36390| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 391
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = +1
Query: 421 TIENVKAKIQDKEGIPPDQQRLIFAGKQLETDAPCQTTTFKKNPTPSCIAPSWRH 585
T++ +I K+ +PP + FAG+ ++ A T K TP+ P+ R+
Sbjct: 104 TLDGESIRITAKQNVPPSRSAQ-FAGQSIQITAIATKTKSKTTTTPTSRTPTSRN 157
>SB_29502| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 697
Score = 29.1 bits (62), Expect = 3.6
Identities = 20/68 (29%), Positives = 27/68 (39%)
Frame = +1
Query: 409 EASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLETDAPCQTTTFKKNPTPSCIAPSWRHA 588
EA D+ EG P+ Q FA + TD Q + PT P+W+
Sbjct: 282 EAQDSQPESTPAAAKPEGQDPNSQGPHFARTPIRTDPISQGPQLARTPTRK--DPNWQGP 339
Query: 589 DFVKTLTG 612
F +T TG
Sbjct: 340 QFPRTPTG 347
>SB_21723| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1512
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Frame = -3
Query: 582 PPRRRNTRWSWILFECCSLTRCVRL--QLLASKDE 484
P R++T SW+LF CC L L LL +D+
Sbjct: 840 PKSRKHTMGSWVLFVCCFLLIVASLGTYLLTQQDD 874
>SB_5145| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 556
Score = 29.1 bits (62), Expect = 3.6
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = -1
Query: 143 KDLHDDLEDTIISLLSVVCRTIMSFVFYIKQNGVEKHLILTISLSS 6
K++ DDL ++ +LS C++ I N V+K LT+ LS+
Sbjct: 173 KEMRDDLFLLVLKVLSRACKSAARSSLLILLNLVQKSRFLTVHLSA 218
>SB_50629| Best HMM Match : Extensin_2 (HMM E-Value=0.94)
Length = 450
Score = 28.7 bits (61), Expect = 4.7
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -3
Query: 555 SWILFECCSLTRCVRLQLLASKDETLLIRRNSFFVL 448
+W+ +CC LT + + A DE IR++ F V+
Sbjct: 67 AWVNIDCCPLTFLLYYGISAILDECFAIRKDIFVVV 102
>SB_22716| Best HMM Match : zf-CCHC (HMM E-Value=0.0097)
Length = 396
Score = 28.7 bits (61), Expect = 4.7
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = +1
Query: 466 PPDQQRLIFAGKQLETDAPCQTTTFKKNPTPSC 564
PP Q+ + G++ E P T K NP P C
Sbjct: 18 PPAQKNRVKGGRRQEPRKPPHTDISKSNPHPKC 50
>SB_19129| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 918
Score = 28.7 bits (61), Expect = 4.7
Identities = 17/59 (28%), Positives = 24/59 (40%)
Frame = +3
Query: 162 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQVSSLLASSWKTDAPCQTTTFKKNPHSIW 338
KT + S + + ++K+G P QQ S +S T A TTF K W
Sbjct: 252 KTAPIRRSSSAKLTTLARPQENKKGFPSPQQQESTDMTSNNTKATSNRTTFVKKYEGAW 310
>SB_3245| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 307
Score = 28.7 bits (61), Expect = 4.7
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -3
Query: 555 SWILFECCSLTRCVRLQLLASKDETLLIRRNSFFVL 448
+W+ +CC LT + + A DE IR++ F V+
Sbjct: 11 AWVNIDCCPLTFLLYYGISAILDECFAIRKDIFVVV 46
>SB_59029| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 1023
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +2
Query: 257 LIFAGKQLEDGRTLSDYNIQKES 325
LI+AGK L D L +YNI ++S
Sbjct: 112 LIYAGKILNDDNPLKEYNIDEKS 134
>SB_275| Best HMM Match : RibD_C (HMM E-Value=0.00017)
Length = 156
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +1
Query: 469 PDQQRLIFAGKQLETDAPCQTTTFKKNPT 555
PD+ I + K+++ PC T T KK+PT
Sbjct: 70 PDKHSYILSSKKIDVPLPCITVT-KKSPT 97
>SB_56405| Best HMM Match : Fels1 (HMM E-Value=6.5)
Length = 119
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = -3
Query: 429 LNCVRSFYFQSDGLSGQSFHEDLHPPRRRSTRWSV 325
+NCVRS QS LS Q +E RR W++
Sbjct: 6 INCVRSLPLQSGNLSCQLHNESATRGERRFAYWAL 40
>SB_11656| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 66
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +1
Query: 385 GKTITLEVE-ASDTIENVKAKIQDKEGIPPDQQRLIFAG 498
G T E+E A +++E + I GIP D+Q L+ G
Sbjct: 10 GAMYTFEMEMAMESVETLMGSIASSTGIPVDKQVLLICG 48
>SB_52365| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 27.9 bits (59), Expect = 8.3
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = +3
Query: 573 FVEACRFRENSDRKDHHFGSRSFGHNRECEGEIPXP 680
F +AC++ E D K + + FGH + + + P P
Sbjct: 53 FTDACKYGEEKDPKTLNPNCKKFGHVLDKDSQGPRP 88
>SB_24946| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 822
Score = 27.9 bits (59), Expect = 8.3
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -1
Query: 356 LHEDAVPDGVWILFEC 309
L ED +PDG W+ EC
Sbjct: 80 LEEDDIPDGEWLCIEC 95
>SB_18178| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 489
Score = 27.9 bits (59), Expect = 8.3
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +1
Query: 502 QLETDAPCQTTTFKKNPTPSCIAPSW 579
Q E DAPC+ +++ K + CI P W
Sbjct: 351 QEERDAPCKISSWFKCRSGVCIPPQW 376
>SB_14984| Best HMM Match : 7tm_1 (HMM E-Value=2.4e-06)
Length = 269
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/41 (29%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = -1
Query: 455 LSWIFAFTFSIVSEASTSKVMVFPVRV--FTKICILHEDAV 339
++W T S+V TS + +P+ +T++CIL D +
Sbjct: 148 VAWFVGATLSVVHPGCTSILKTYPIDTGQYTRLCILGVDTL 188
>SB_5719| Best HMM Match : Helicase_C (HMM E-Value=1e-24)
Length = 1366
Score = 27.9 bits (59), Expect = 8.3
Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 5/65 (7%)
Frame = +3
Query: 363 DLRENSDRKDHHFGS--RSFGHN*ECEGEDPRQRRNSS*STASHLCWQAAGDGRTL---S 527
DLR + GS R GH E EGE RRN + + S C ++ D L S
Sbjct: 951 DLRRENTYSGSDGGSVARDEGHLAEKEGEGEADRRNGNQTVESQACAPSSVDPSALGVAS 1010
Query: 528 DYNIQ 542
DY+ +
Sbjct: 1011 DYHTE 1015
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,427,925
Number of Sequences: 59808
Number of extensions: 528681
Number of successful extensions: 1608
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1294
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1568
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1805522550
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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