Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021352
(692 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L36067-1|AAA29362.1| 229|Anopheles gambiae polyubiquitin protein. 148 1e-37
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein. 25 2.3
AB090814-1|BAC57903.1| 499|Anopheles gambiae gag-like protein p... 25 3.0
DQ230894-1|ABD94313.1| 315|Anopheles gambiae zinc finger protei... 24 5.2
DQ230893-1|ABD94311.1| 315|Anopheles gambiae zinc finger protei... 24 5.2
DQ004399-1|AAY21238.1| 847|Anopheles gambiae lysozyme c-6 protein. 24 5.2
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein. 24 5.2
AY313948-1|AAP76391.1| 424|Anopheles gambiae cytochrome P450 CY... 23 9.1
>L36067-1|AAA29362.1| 229|Anopheles gambiae polyubiquitin protein.
Length = 229
Score = 148 bits (359), Expect = 1e-37
Identities = 80/112 (71%), Positives = 84/112 (75%), Gaps = 1/112 (0%)
Frame = +1
Query: 358 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLETDAPCQTTT 537
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 538 FKKNPTPSCIAPSWRHAD-FVKTLTGKTITLEVEASDTIENVKARFXDQEGI 690
+K T + FVKTLTGKTITLEVE SDTIENVKA+ D+EGI
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGI 112
Score = 148 bits (359), Expect = 1e-37
Identities = 80/112 (71%), Positives = 84/112 (75%), Gaps = 1/112 (0%)
Frame = +1
Query: 358 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLETDAPCQTTT 537
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 538 FKKNPTPSCIAPSWRHAD-FVKTLTGKTITLEVEASDTIENVKARFXDQEGI 690
+K T + FVKTLTGKTITLEVE SDTIENVKA+ D+EGI
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGI 188
Score = 103 bits (248), Expect = 4e-24
Identities = 52/66 (78%), Positives = 53/66 (80%)
Frame = +1
Query: 358 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLETDAPCQTTT 537
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 538 FKKNPT 555
+K T
Sbjct: 213 IQKEST 218
Score = 87.0 bits (206), Expect = 5e-19
Identities = 41/41 (100%), Positives = 41/41 (100%)
Frame = +3
Query: 132 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQ 254
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQ
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQ 41
Score = 87.0 bits (206), Expect = 5e-19
Identities = 41/41 (100%), Positives = 41/41 (100%)
Frame = +3
Query: 132 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQ 254
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQ
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQ 117
Score = 87.0 bits (206), Expect = 5e-19
Identities = 41/41 (100%), Positives = 41/41 (100%)
Frame = +3
Query: 132 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQ 254
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQ
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQ 193
Score = 77.0 bits (181), Expect = 5e-16
Identities = 52/114 (45%), Positives = 65/114 (57%), Gaps = 2/114 (1%)
Frame = +2
Query: 257 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGCRSS*KL*PERPSLWK*KLRTQLRM* 436
LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG + K + + + +
Sbjct: 43 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 102
Query: 437 RRRSKTKKEFLLINSVSSLLASSWRRTHLVRLQHS--KRIQLHLVLRLRGGMQI 592
+ + + KE + + + A ++ K LHLVLRLRGGMQI
Sbjct: 103 KAKIQ-DKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQI 155
Score = 72.5 bits (170), Expect = 1e-14
Identities = 34/34 (100%), Positives = 34/34 (100%)
Frame = +2
Query: 257 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 358
LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 195 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 228
Score = 71.3 bits (167), Expect = 3e-14
Identities = 49/111 (44%), Positives = 62/111 (55%), Gaps = 2/111 (1%)
Frame = +2
Query: 257 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGCRSS*KL*PERPSLWK*KLRTQLRM* 436
LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG + K + + + +
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 178
Query: 437 RRRSKTKKEFLLINSVSSLLASSWRRTHLVRLQHS--KRIQLHLVLRLRGG 583
+ + + K E + + + A ++ K LHLVLRLRGG
Sbjct: 179 KAKIQDK-EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 228
>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
Length = 3318
Score = 25.0 bits (52), Expect = 2.3
Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = +1
Query: 409 EASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLETDAP--CQTTTF 540
+++ + K I+D +G P + I+ GK+ E +AP +TT F
Sbjct: 2522 DSAGRLSRKKYYIRDVQGKPLIEYEGIYEGKESENNAPSVVRTTVF 2567
>AB090814-1|BAC57903.1| 499|Anopheles gambiae gag-like protein
protein.
Length = 499
Score = 24.6 bits (51), Expect = 3.0
Identities = 12/58 (20%), Positives = 24/58 (41%)
Frame = +1
Query: 427 ENVKAKIQDKEGIPPDQQRLIFAGKQLETDAPCQTTTFKKNPTPSCIAPSWRHADFVK 600
E + +++ + PP+ ++ T + KN PSC P +++ VK
Sbjct: 163 ERAEKALREVQSEPPETPMTGKRSRKARTPEEAEDAKRAKNDAPSCNRPDAEYSEGVK 220
>DQ230894-1|ABD94313.1| 315|Anopheles gambiae zinc finger protein
183 protein.
Length = 315
Score = 23.8 bits (49), Expect = 5.2
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +3
Query: 534 NIQKESNSILYCAFVEACRFRENSDRKDHHFG 629
+I K+ YC F ++C+F DR D+ G
Sbjct: 179 DICKDYKETGYCGFGDSCKFLH--DRSDYKHG 208
>DQ230893-1|ABD94311.1| 315|Anopheles gambiae zinc finger protein
183 protein.
Length = 315
Score = 23.8 bits (49), Expect = 5.2
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +3
Query: 534 NIQKESNSILYCAFVEACRFRENSDRKDHHFG 629
+I K+ YC F ++C+F DR D+ G
Sbjct: 179 DICKDYKETGYCGFGDSCKFLH--DRSDYKHG 208
>DQ004399-1|AAY21238.1| 847|Anopheles gambiae lysozyme c-6 protein.
Length = 847
Score = 23.8 bits (49), Expect = 5.2
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -3
Query: 429 LNCVRSFYFQSDGLSGQSFH 370
+ CVR+ Y + +SG FH
Sbjct: 267 VRCVRTIYDEHQRISGNGFH 286
Score = 23.4 bits (48), Expect = 6.9
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -3
Query: 648 CVRSFYFQSDGLSGQSFH 595
CVR+ Y + +SG FH
Sbjct: 269 CVRTIYDEHQRISGNGFH 286
>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
Length = 3320
Score = 23.8 bits (49), Expect = 5.2
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = +1
Query: 409 EASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLETDAP 522
+++ + K I+D +G P + I+ GK+ E +AP
Sbjct: 2521 DSAGRLSRKKYYIRDVQGKPLIEYEGIYEGKESENNAP 2558
>AY313948-1|AAP76391.1| 424|Anopheles gambiae cytochrome P450
CYP6M4 protein.
Length = 424
Score = 23.0 bits (47), Expect = 9.1
Identities = 10/29 (34%), Positives = 13/29 (44%)
Frame = +3
Query: 567 CAFVEACRFRENSDRKDHHFGSRSFGHNR 653
CAF C N D + G + FG +R
Sbjct: 129 CAFGIECNSMRNPDAEFRVMGKKIFGRSR 157
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 779,420
Number of Sequences: 2352
Number of extensions: 17044
Number of successful extensions: 53
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70250040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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