Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021352
         (692 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              25   0.90 
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    25   0.90 
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    23   3.6  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    23   3.6  

>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 24.6 bits (51), Expect = 0.90
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +1

Query: 415 SDTIENVKAKIQDKEGIPPDQQRLIFAGKQ 504
           +DT+   K KI  K  I PD + L+   KQ
Sbjct: 732 TDTVLAYKPKILGKPTISPDSRHLVTLDKQ 761


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 24.6 bits (51), Expect = 0.90
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +1

Query: 298 VRLQHSKRIHTPSGTASSW 354
           + LQ  K+ HTP+G   +W
Sbjct: 785 IELQIQKQSHTPNGIVKTW 803


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -1

Query: 254 LLIRRNSFFVLDLRLYILNC 195
           LLIR  SF +L+  L   NC
Sbjct: 137 LLIRFKSFSLLNFNLLFFNC 156



 Score = 21.8 bits (44), Expect = 6.4
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -3

Query: 480 LLIRRNSFFVLDLRLHILNC 421
           LLIR  SF +L+  L   NC
Sbjct: 137 LLIRFKSFSLLNFNLLFFNC 156


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 13/38 (34%), Positives = 16/38 (42%)
 Frame = +1

Query: 514 DAPCQTTTFKKNPTPSCIAPSWRHADFVKTLTGKTITL 627
           DA  Q      NP  S      R ADF+K   G+ + L
Sbjct: 577 DASVQPQVISGNPVASVNMVGERAADFIKEDWGELLQL 614


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 205,839
Number of Sequences: 438
Number of extensions: 4879
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21195810
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)