Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021348
         (694 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    23   2.4  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           21   7.2  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    21   7.2  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    21   7.2  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    21   7.2  

>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +1

Query: 442 N*HCLISRKNSSICSGC 492
           N  C+I++KN + C  C
Sbjct: 45  NGECVINKKNRTACKAC 61


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +3

Query: 615 YWAIVRQRDIK 647
           YW+  RQRDI+
Sbjct: 217 YWSAKRQRDIR 227


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = -3

Query: 164 TQAVFLLVLLFNIF 123
           TQA+FL+ + +NI+
Sbjct: 185 TQAIFLMFVSYNIY 198


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = -3

Query: 164 TQAVFLLVLLFNIF 123
           TQA+FL+ + +NI+
Sbjct: 111 TQAIFLMFVSYNIY 124


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = -3

Query: 251 PSSLRSFSLKAFFSNRISATPLLSLNFPTT 162
           P+S+ SF+L+   S   S+ P+LS    TT
Sbjct: 221 PASIDSFTLEQHRSWCSSSQPVLSTTNSTT 250


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,698
Number of Sequences: 336
Number of extensions: 3205
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18218375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)