Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021348
         (694 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.    27   0.74 
DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.            25   3.0  
AY345586-1|AAR09143.1|  427|Anopheles gambiae myosuppressin rece...    25   3.0  
AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ chann...    23   9.1  
AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium ch...    23   9.1  

>DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.
          Length = 847

 Score = 26.6 bits (56), Expect = 0.74
 Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
 Frame = +3

Query: 324 PSTINGVKTTIIYPATDKHIAKFSQQEVHIVLETPELYKELTLP-HLEKEQFNLQWV 491
           P+T N  +  I+ P T   + K S  EV  V +  EL  +L    HL KEQ    WV
Sbjct: 313 PTTQNKPRPGIVAPTTIPTVPKKSLAEVGKVYDRCELANDLLHKFHLPKEQV-ATWV 368


>DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.
          Length = 847

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +2

Query: 482 AVGVQHSRRKSEQDRIVHDNKSEKEG 559
           A G+Q S +K E+DR   D   + EG
Sbjct: 76  AGGIQQSGKKPEKDRKPSDEDDDDEG 101


>AY345586-1|AAR09143.1|  427|Anopheles gambiae myosuppressin
           receptor protein.
          Length = 427

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 8/30 (26%), Positives = 17/30 (56%)
 Frame = -3

Query: 377 LISGWVDYCSFHTVYSRRRETLEVSVNIVL 288
           L  GW  Y  FH+++++   T+ + + + L
Sbjct: 123 LTYGWAWYIMFHSIFAQICHTISIWLTVTL 152


>AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ channel
           protein.
          Length = 574

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -3

Query: 350 SFHTVYSRRRETLEVSVNIVLE 285
           S+++VYSR    LE    ++LE
Sbjct: 356 SYYSVYSRNNCELECEAKLILE 377


>AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium
           channel protein.
          Length = 572

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -3

Query: 350 SFHTVYSRRRETLEVSVNIVLE 285
           S+++VYSR    LE    ++LE
Sbjct: 356 SYYSVYSRNNCELECEAKLILE 377


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 668,334
Number of Sequences: 2352
Number of extensions: 12541
Number of successful extensions: 28
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70250040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)