Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021347
         (635 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    22   3.7  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    22   3.7  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   6.5  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    21   6.5  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   6.5  

>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -2

Query: 592 TSVSCPMFET*NGLYHIQLPPH 527
           T VS P F     LY+ ++P H
Sbjct: 258 TEVSAPFFRQPLDLYNFRVPQH 279


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -2

Query: 484 RTIHMTLSIKFKMNKSFILGRRYRECCIY 398
           RT+   LS   +  K+ I+ +R R  C Y
Sbjct: 112 RTVRKDLSYACREEKNCIIDKRQRNRCQY 140


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 12/40 (30%), Positives = 20/40 (50%)
 Frame = -1

Query: 269 HLPLNYLPFNVHYKYYCSIYERCSVVLLFTRALALASNLN 150
           ++ +NY    VH K       R  V+++    LA+ +NLN
Sbjct: 396 NIKVNY--HRVHRKIMVQSLGRVGVLVVIIGTLAIIANLN 433


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 12/40 (30%), Positives = 20/40 (50%)
 Frame = -1

Query: 269 HLPLNYLPFNVHYKYYCSIYERCSVVLLFTRALALASNLN 150
           ++ +NY    VH K       R  V+++    LA+ +NLN
Sbjct: 121 NIKVNY--HRVHRKIMVQSLGRVGVLVVIIGTLAIIANLN 158


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = -3

Query: 123 FCTSFIHLNKHLFTL 79
           FC +FI  N HL  L
Sbjct: 182 FCCAFIFFNMHLLFL 196


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,855
Number of Sequences: 336
Number of extensions: 3144
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16397237
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)