Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021347
         (635 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    23   1.9  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    23   1.9  
AM158085-1|CAJ43389.1|  171|Apis mellifera globin 1 protein.           23   3.3  
AM158084-1|CAJ43388.1|  171|Apis mellifera globin 1 protein.           23   3.3  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       22   5.7  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    22   5.7  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          21   7.6  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      21   7.6  

>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -2

Query: 484 RTIHMTLSIKFKMNKSFILGRRYRECCIY 398
           RT+   LS   +  KS I+ +R R  C Y
Sbjct: 136 RTVRKDLSYACREEKSCIIDKRQRNRCQY 164


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -2

Query: 484 RTIHMTLSIKFKMNKSFILGRRYRECCIY 398
           RT+   LS   +  KS I+ +R R  C Y
Sbjct: 136 RTVRKDLSYACREEKSCIIDKRQRNRCQY 164


>AM158085-1|CAJ43389.1|  171|Apis mellifera globin 1 protein.
          Length = 171

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 11/39 (28%), Positives = 21/39 (53%)
 Frame = -1

Query: 332 VLHLCFYRCSKIYLHLTSLMEHLPLNYLPFNVHYKYYCS 216
           V+   F +  +   + T+ M+  PLN LP N  ++ +C+
Sbjct: 50  VMTAFFKKYPEYQRYFTAFMD-TPLNELPANKRFQAHCA 87


>AM158084-1|CAJ43388.1|  171|Apis mellifera globin 1 protein.
          Length = 171

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 11/39 (28%), Positives = 21/39 (53%)
 Frame = -1

Query: 332 VLHLCFYRCSKIYLHLTSLMEHLPLNYLPFNVHYKYYCS 216
           V+   F +  +   + T+ M+  PLN LP N  ++ +C+
Sbjct: 50  VMTAFFKKYPEYQRYFTAFMD-TPLNELPANKRFQAHCA 87


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = -1

Query: 353 LGNLESLVLHLCFYRCSKIYLHLTSLMEHLPL 258
           +GN   L+L  C  R SK  +H+  ++ HL +
Sbjct: 53  IGNTTVLILITCRKRVSKSRIHI--MLMHLAI 82


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +2

Query: 245 KEDNLGEGVPLNSSGANIFLNTGKSKD 325
           +++ L +  P N  G + FLN  K KD
Sbjct: 649 QKEFLPKEFPANIEGTSYFLNDYKHKD 675


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -1

Query: 425 KTLSRMLYLYVHQGLMVSLFLD 360
           K +   LY ++H+ LM   FL+
Sbjct: 254 KEIRGQLYYFLHKQLMTRYFLE 275


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -1

Query: 425 KTLSRMLYLYVHQGLMVSLFLD 360
           K +   LY ++H+ LM   FL+
Sbjct: 254 KEIRGQLYYFLHKQLMTRYFLE 275


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,803
Number of Sequences: 438
Number of extensions: 3647
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19071468
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)