Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021346
         (696 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    40   7e-05
AY534996-1|AAT07394.1|  471|Anopheles gambiae XK-related b protein.    25   2.3  
AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein pr...    25   2.3  
AJ697720-1|CAG26913.1|  207|Anopheles gambiae putative odorant-b...    24   5.3  

>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 39.9 bits (89), Expect = 7e-05
 Identities = 18/56 (32%), Positives = 31/56 (55%)
 Frame = +2

Query: 347 EVTVXGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA 514
           +V V G    + ++ FE +   + V   V+   Y +PTPIQ    PI ++G++L+A
Sbjct: 161 QVRVSGENPPDHVESFERSGLREEVMTNVRKSSYTKPTPIQRYAIPIILNGRDLMA 216



 Score = 28.3 bits (60), Expect = 0.24
 Identities = 11/18 (61%), Positives = 15/18 (83%)
 Frame = +3

Query: 519 KTGSGKTLAYILPAIVHI 572
           +TGSGKT A++LP I H+
Sbjct: 219 QTGSGKTAAFMLPMIHHL 236



 Score = 24.2 bits (50), Expect = 4.0
 Identities = 11/19 (57%), Positives = 11/19 (57%)
 Frame = +1

Query: 625 APTRELAQQIQQVAADFGH 681
           APTRELA QI      F H
Sbjct: 256 APTRELAIQIHDEGRKFAH 274


>AY534996-1|AAT07394.1|  471|Anopheles gambiae XK-related b protein.
          Length = 471

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 14/47 (29%), Positives = 22/47 (46%)
 Frame = -2

Query: 152 RRIIAEFVASSKFGTTVSTAIIPVTRHDYFSDLVEDVYLNYGFFLTQ 12
           RR+ A+  A ++F          ++   YF D+V DV L Y  +  Q
Sbjct: 59  RRVRAKSKAMTEFLPLCDVLFNVISLAGYFCDVVFDVVLGYALYERQ 105


>AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein
           protein.
          Length = 476

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 6/38 (15%)
 Frame = -1

Query: 225 ALQRILFSHQSLQILQ------IYCHRCQTETNYRRIC 130
           A +R+  SHQS  IL+      I CHRC+   + +R C
Sbjct: 180 AQKRMEKSHQSESILRVGPEKKITCHRCRKPGHMKRDC 217


>AJ697720-1|CAG26913.1|  207|Anopheles gambiae putative
           odorant-binding protein OBPjj10 protein.
          Length = 207

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 11/48 (22%), Positives = 21/48 (43%)
 Frame = +2

Query: 455 PTPIQAQGWPIAMSGKNLLAYQNGFRQNVGLHLASNCAHK*PTAYSER 598
           P P +  GW ++ SG ++  + +  ++       S CA   P+    R
Sbjct: 49  PPPCRVPGWRLSTSGASIRMHASARKRAYCPRTRSACAETFPSTRRRR 96


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 675,641
Number of Sequences: 2352
Number of extensions: 13136
Number of successful extensions: 24
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70668195
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)