Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021343
(661 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 195 2e-50
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 128 4e-30
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 124 5e-29
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 99 2e-21
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 97 8e-21
SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049) 58 8e-09
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07) 42 6e-04
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_56988| Best HMM Match : DUF229 (HMM E-Value=2e-06) 31 0.83
SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) 31 0.83
SB_4173| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.83
SB_59802| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_53077| Best HMM Match : SRP54_N (HMM E-Value=1.8) 31 1.1
SB_50928| Best HMM Match : 7tm_2 (HMM E-Value=4.7e-07) 31 1.1
SB_40980| Best HMM Match : ANF_receptor (HMM E-Value=0.00014) 31 1.1
SB_53662| Best HMM Match : Protamine_P2 (HMM E-Value=9.2) 31 1.1
SB_33833| Best HMM Match : DUF947 (HMM E-Value=0.2) 31 1.1
SB_21520| Best HMM Match : Trypsin (HMM E-Value=0) 31 1.1
SB_1210| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_55989| Best HMM Match : zf-C2H2 (HMM E-Value=8e-08) 30 1.9
SB_24762| Best HMM Match : Astacin (HMM E-Value=0) 30 1.9
SB_51671| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_9053| Best HMM Match : TIG (HMM E-Value=0) 29 4.4
SB_53017| Best HMM Match : Kazal_1 (HMM E-Value=0) 29 4.4
SB_7343| Best HMM Match : EGF (HMM E-Value=0) 28 5.9
SB_42630| Best HMM Match : Ets (HMM E-Value=0) 28 7.7
SB_34715| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 195 bits (476), Expect = 2e-50
Identities = 109/197 (55%), Positives = 127/197 (64%), Gaps = 1/197 (0%)
Frame = +1
Query: 73 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 252
MAK PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAF+DTERLIGDAAKNQVA
Sbjct: 1 MAKTPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFSDTERLIGDAAKNQVA 60
Query: 253 ITP-TTQYSMPNVSSDVSSKMLLCKPT*STGLSRLSXXRQT*DQGSI*G*RQNLFPRGSQ 429
+ P T + + ++ + + + Q G +++ FP
Sbjct: 61 MNPENTVFDAKRLIGRKFDDPVVARDMTHWPFHVIREGERPKIQVEFKGEKKSFFPEEIS 120
Query: 430 FHGAYENEGNCRSLSRQNCAECSYHGSAYFNDSQRQATKDAGTISGLNVLRIINEPTAAA 609
+ + + + AYF+DSQRQATKDAGTI+GLNVLRIINEPTAAA
Sbjct: 121 SMVLTKMKETAEAYLGAKVTDAVVTVPAYFHDSQRQATKDAGTIAGLNVLRIINEPTAAA 180
Query: 610 IAYGLDKKGTGERNVLI 660
IAYGLDKK ERNVLI
Sbjct: 181 IAYGLDKKVGVERNVLI 197
Score = 82.2 bits (194), Expect = 3e-16
Identities = 38/56 (67%), Positives = 46/56 (82%)
Frame = +2
Query: 344 FRGCQXGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVP 511
F + G +PKI+V +KGE K+FFPEE+SSMVLTKMKETAEAYLG V +AV+TVP
Sbjct: 92 FHVIREGERPKIQVEFKGEKKSFFPEEISSMVLTKMKETAEAYLGAKVTDAVVTVP 147
Score = 62.9 bits (146), Expect = 2e-10
Identities = 29/65 (44%), Positives = 37/65 (56%)
Frame = +3
Query: 255 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVXXEANLRSR*HIRVKTKPFSPRKSVP 434
NP NT+FDAKRLIGRKF+D V DM HWPF V+ + + + + K F P +
Sbjct: 62 NPENTVFDAKRLIGRKFDDPVVARDMTHWPFHVIREGERPKIQVEFKGEKKSFFPEEISS 121
Query: 435 WCLRK 449
L K
Sbjct: 122 MVLTK 126
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 128 bits (309), Expect = 4e-30
Identities = 58/64 (90%), Positives = 61/64 (95%)
Frame = +1
Query: 73 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 252
M KAPA+GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTD ERL+GDAAKNQVA
Sbjct: 1 MTKAPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDEERLVGDAAKNQVA 60
Query: 253 ITPT 264
+ PT
Sbjct: 61 MNPT 64
Score = 92.7 bits (220), Expect = 2e-19
Identities = 46/50 (92%), Positives = 46/50 (92%)
Frame = +1
Query: 511 AYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLI 660
AYFNDSQRQATKDAG ISGLNVLRIINEPTAAAIAYGLDKK ERNVLI
Sbjct: 241 AYFNDSQRQATKDAGVISGLNVLRIINEPTAAAIAYGLDKKVGQERNVLI 290
Score = 80.6 bits (190), Expect = 1e-15
Identities = 37/49 (75%), Positives = 42/49 (85%)
Frame = +2
Query: 365 GKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVP 511
G+PK+KV YKGE KTFF EE+SSMVL KMKETAEAYLG V +AV+TVP
Sbjct: 124 GRPKVKVEYKGETKTFFAEEISSMVLNKMKETAEAYLGCKVTDAVVTVP 172
Score = 63.7 bits (148), Expect = 1e-10
Identities = 29/53 (54%), Positives = 36/53 (67%)
Frame = +3
Query: 255 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVXXEANLRSR*HIRVKTKPF 413
NP NTIFDAKRLIGR+F+D V+ DMKHW FEVV + + + +TK F
Sbjct: 62 NPTNTIFDAKRLIGRRFDDPGVKDDMKHWSFEVVNEAGRPKVKVEYKGETKTF 114
Score = 47.6 bits (108), Expect = 9e-06
Identities = 22/30 (73%), Positives = 26/30 (86%)
Frame = +2
Query: 422 EVSSMVLTKMKETAEAYLGKTVQNAVITVP 511
++SSMVL KMKETAEAYLG V +AV+TVP
Sbjct: 211 QISSMVLNKMKETAEAYLGCKVTDAVVTVP 240
Score = 35.5 bits (78), Expect = 0.039
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +1
Query: 511 AYFNDSQRQATKDAG 555
AYFNDSQRQATKDAG
Sbjct: 173 AYFNDSQRQATKDAG 187
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 124 bits (300), Expect = 5e-29
Identities = 56/63 (88%), Positives = 60/63 (95%)
Frame = +1
Query: 73 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 252
M KAPA+GIDLGTTYSCVGVFQ+GKVEIIANDQGNRTTPSYV FTDTERL+GDAAKNQVA
Sbjct: 1 MGKAPAIGIDLGTTYSCVGVFQNGKVEIIANDQGNRTTPSYVGFTDTERLVGDAAKNQVA 60
Query: 253 ITP 261
+ P
Sbjct: 61 LNP 63
Score = 93.1 bits (221), Expect = 2e-19
Identities = 43/50 (86%), Positives = 48/50 (96%)
Frame = +1
Query: 511 AYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLI 660
AYFNDSQRQATKDAGTI+GLNVLR+INEPTAAA+AYGLDK +GE+NVLI
Sbjct: 148 AYFNDSQRQATKDAGTIAGLNVLRVINEPTAAALAYGLDKSLSGEKNVLI 197
Score = 76.6 bits (180), Expect = 2e-14
Identities = 38/56 (67%), Positives = 43/56 (76%)
Frame = +2
Query: 344 FRGCQXGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVP 511
F+ KPKI+V YKGE KTF EE+SSMVL KMKETAEAYLG+ V +AVITVP
Sbjct: 92 FKIISDNNKPKIQVEYKGERKTFAAEEISSMVLGKMKETAEAYLGQKVTSAVITVP 147
Score = 64.1 bits (149), Expect = 1e-10
Identities = 25/34 (73%), Positives = 32/34 (94%)
Frame = +3
Query: 255 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVV 356
NP NTIFDAKRLIGR+++DATVQ+DMK WPF+++
Sbjct: 62 NPENTIFDAKRLIGRRYDDATVQSDMKLWPFKII 95
>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
Length = 437
Score = 99 bits (238), Expect = 2e-21
Identities = 72/205 (35%), Positives = 108/205 (52%), Gaps = 11/205 (5%)
Frame = +1
Query: 79 KAPAVGIDLGTTYSCVGVFQ--HGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 252
K +GIDLGTTYSCVG +Q G+++I +++ ++ PS VAFTD L+G+ A +Q
Sbjct: 30 KPKIIGIDLGTTYSCVGAYQAISGRIDIFSDENDDKVVPSLVAFTDKGVLVGEKALSQAE 89
Query: 253 ITP-TTQYSMPNVSSDVSSKMLLCKPT*STGLSRLSXXRQT*DQ----GSI*G*RQNLFP 417
I P T Y +K L + + +L R T D+ G + G + N
Sbjct: 90 INPKNTIYDAKRFIGKTFTKQELLE------IGKLYQFRVTTDKRGNAGFLVGKKGNFTV 143
Query: 418 RGSQFHGAYENEGNCRSLSRQN----CAECSYHGSAYFNDSQRQATKDAGTISGLNVLRI 585
+ G Y + R+++ +N + A F+ QR AT A +++G+ VLR+
Sbjct: 144 ITPEEIGGYVIK-KLRTMAERNLTTTVTKAVMSVPAEFDIKQRNATVKAASLAGITVLRV 202
Query: 586 INEPTAAAIAYGLDKKGTGERNVLI 660
INEPTAAA+AYGL KK G NV++
Sbjct: 203 INEPTAAALAYGLHKK-EGVANVMV 226
Score = 34.3 bits (75), Expect = 0.089
Identities = 18/49 (36%), Positives = 24/49 (48%)
Frame = +2
Query: 365 GKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVP 511
G V KG PEE+ V+ K++ AE L TV AV++VP
Sbjct: 129 GNAGFLVGKKGNFTVITPEEIGGYVIKKLRTMAERNLTTTVTKAVMSVP 177
Score = 31.9 bits (69), Expect = 0.48
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = +3
Query: 255 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEV 353
NP NTI+DAKR IG+ F + K + F V
Sbjct: 91 NPKNTIYDAKRFIGKTFTKQELLEIGKLYQFRV 123
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 97.5 bits (232), Expect = 8e-21
Identities = 45/58 (77%), Positives = 51/58 (87%), Gaps = 1/58 (1%)
Frame = +1
Query: 91 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAITP 261
+GIDLGTTYSCVGVF++G+VEIIANDQGNR TPSYVAFT+ ERLIGD AKNQ+ P
Sbjct: 704 IGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTEEGERLIGDGAKNQLTTNP 761
Score = 84.6 bits (200), Expect = 6e-17
Identities = 39/50 (78%), Positives = 46/50 (92%)
Frame = +1
Query: 511 AYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLI 660
AYFND+QRQATKDAG I+GL V+RIINEPTAAAIAYG+DKK GE+N+L+
Sbjct: 846 AYFNDAQRQATKDAGAIAGLTVMRIINEPTAAAIAYGMDKK-EGEKNILV 894
Score = 69.7 bits (163), Expect = 2e-12
Identities = 34/56 (60%), Positives = 41/56 (73%)
Frame = +2
Query: 344 FRGCQXGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVP 511
F+ KP ++V K E KTF EE+S+MVLTKMKETAEAYLGK V +AV+TVP
Sbjct: 790 FKVVDKNKKPHVQVKVKDEIKTFAAEEISAMVLTKMKETAEAYLGKKVTHAVVTVP 845
Score = 56.4 bits (130), Expect = 2e-08
Identities = 26/51 (50%), Positives = 37/51 (72%)
Frame = +3
Query: 255 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVXXEANLRSR*HIRVKTK 407
NP NT+FDAKRLIGR ++D +VQ D+K +PF+VV + + H++VK K
Sbjct: 760 NPENTVFDAKRLIGRSWDDTSVQNDLKFFPFKVV----DKNKKPHVQVKVK 806
>SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049)
Length = 179
Score = 57.6 bits (133), Expect = 8e-09
Identities = 40/73 (54%), Positives = 44/73 (60%), Gaps = 26/73 (35%)
Frame = +1
Query: 511 AYFNDSQRQATKDAGTISGLN------------------------VLRIINEPTAAAIAY 618
A+FND+QRQATKDAGTI+GL+ VLRIINEPTAAAIAY
Sbjct: 47 AHFNDAQRQATKDAGTIAGLDVLSRTASERPPSRFRRRRPHGRSRVLRIINEPTAAAIAY 106
Query: 619 GLDKK--GTGERN 651
GLDK G ERN
Sbjct: 107 GLDKARGGKAERN 119
Score = 50.4 bits (115), Expect = 1e-06
Identities = 23/45 (51%), Positives = 34/45 (75%)
Frame = +2
Query: 377 IKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVP 511
I V GE ++F PE++S++VL ++K AEA+LG+ V+ AVITVP
Sbjct: 2 IAVEVCGEKRSFAPEQISAVVLEQLKADAEAFLGQAVKRAVITVP 46
>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 49.6 bits (113), Expect = 2e-06
Identities = 22/52 (42%), Positives = 33/52 (63%)
Frame = +1
Query: 91 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQ 246
VG D+G + V + G +E +AN+ +R TPS+V+ D +RLIG + KNQ
Sbjct: 4 VGFDVGNQSCYIAVARGGGIETVANEFSDRCTPSFVSLGDKQRLIGTSGKNQ 55
Score = 46.4 bits (105), Expect = 2e-05
Identities = 19/48 (39%), Positives = 31/48 (64%)
Frame = +1
Query: 490 ECSYHGSAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKK 633
+C +Y+ D QR+ DA +GLN LR++N+ TA ++AYG+ K+
Sbjct: 198 DCVISVPSYYTDRQRRCMLDASATAGLNCLRLMNDTTAVSLAYGIYKQ 245
Score = 43.2 bits (97), Expect = 2e-04
Identities = 20/45 (44%), Positives = 30/45 (66%)
Frame = +2
Query: 377 IKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVP 511
I+V Y G+ + F PE+V +M+ T++K TAE L V + VI+VP
Sbjct: 160 IQVQYLGKQEVFSPEQVMAMLFTRLKTTAEIALKTKVTDCVISVP 204
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/34 (52%), Positives = 22/34 (64%)
Frame = +3
Query: 255 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVV 356
N NTI KR IGRKF D VQ ++ H P++VV
Sbjct: 118 NLKNTISQFKRFIGRKFSDPAVQKEIPHLPYKVV 151
>SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07)
Length = 592
Score = 41.5 bits (93), Expect = 6e-04
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = +1
Query: 142 GKVEIIANDQGNRTTPSYVAFTDTERLI 225
G IIAND G+R TP+ VAF+DTE+LI
Sbjct: 83 GNTTIIANDAGDRVTPAMVAFSDTEKLI 110
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/37 (48%), Positives = 26/37 (70%)
Frame = +1
Query: 514 YFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGL 624
+FN ++R+A A + GLNVL+I+N TA A+ YGL
Sbjct: 115 FFNQAERRALLRAAELVGLNVLQIMNSNTAVALNYGL 151
Score = 34.3 bits (75), Expect = 0.089
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = +2
Query: 371 PKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVP 511
P +K Y+ D TF PEE+ M+L + E + +++ V+TVP
Sbjct: 68 PHVK-NYQQSDVTFTPEELMGMILNHSRFIGEQFADHPIKDVVLTVP 113
>SB_56988| Best HMM Match : DUF229 (HMM E-Value=2e-06)
Length = 286
Score = 31.1 bits (67), Expect = 0.83
Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = +3
Query: 471 ISAKLCRM-QLSRF-RVLQ*LSKTSHKRCRYHLRLERSPNH 587
+SAKLC + LS+ R LQ S ++C Y +++E SP H
Sbjct: 198 LSAKLCHVVTLSKIVRALQTHSHLHKRQCSYQIQIETSPAH 238
>SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16)
Length = 212
Score = 31.1 bits (67), Expect = 0.83
Identities = 15/25 (60%), Positives = 20/25 (80%), Gaps = 1/25 (4%)
Frame = +1
Query: 151 EIIANDQGNRTTPSYVAFT-DTERL 222
++I N +G+RTTPS VAFT + ERL
Sbjct: 7 KVIENAEGSRTTPSVVAFTPEGERL 31
>SB_4173| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 743
Score = 31.1 bits (67), Expect = 0.83
Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = +3
Query: 471 ISAKLCRM-QLSRF-RVLQ*LSKTSHKRCRYHLRLERSPNH 587
+SAKLC + LS+ R LQ S ++C Y +++E SP H
Sbjct: 655 LSAKLCHVITLSKIVRALQTHSHLHKRQCSYQIQIETSPAH 695
>SB_59802| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3213
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +2
Query: 266 HNIRCQTSHRT*VRRCYCASRHEALAFRGCQXG 364
H++RC+ HR VRR Y RH R C G
Sbjct: 452 HHMRCEIPHRC-VRRKYRIRRHSPFRLRNCWEG 483
>SB_53077| Best HMM Match : SRP54_N (HMM E-Value=1.8)
Length = 533
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +2
Query: 266 HNIRCQTSHRT*VRRCYCASRHEALAFRGCQXG 364
H++RC+ HR VRR Y RH R C G
Sbjct: 45 HHMRCEIPHRC-VRRKYRIRRHSPFRLRNCWEG 76
>SB_50928| Best HMM Match : 7tm_2 (HMM E-Value=4.7e-07)
Length = 1127
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +2
Query: 266 HNIRCQTSHRT*VRRCYCASRHEALAFRGCQXG 364
H++RC+ HR VRR Y RH R C G
Sbjct: 626 HHMRCEIPHRC-VRRKYRIRRHSPFRLRNCWEG 657
>SB_40980| Best HMM Match : ANF_receptor (HMM E-Value=0.00014)
Length = 735
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +2
Query: 266 HNIRCQTSHRT*VRRCYCASRHEALAFRGCQXG 364
H++RC+ HR VRR Y RH R C G
Sbjct: 535 HHMRCEIPHRC-VRRKYRIRRHSPFRLRNCWEG 566
>SB_53662| Best HMM Match : Protamine_P2 (HMM E-Value=9.2)
Length = 253
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +2
Query: 266 HNIRCQTSHRT*VRRCYCASRHEALAFRGCQXG 364
H++RC+ HR VRR Y RH R C G
Sbjct: 168 HHMRCEIPHRC-VRRKYRIRRHSPFRLRNCWEG 199
>SB_33833| Best HMM Match : DUF947 (HMM E-Value=0.2)
Length = 1106
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +2
Query: 266 HNIRCQTSHRT*VRRCYCASRHEALAFRGCQXG 364
H++RC+ HR VRR Y RH R C G
Sbjct: 894 HHMRCEIPHRC-VRRKYRIRRHSPFRLRNCWEG 925
>SB_21520| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 800
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +2
Query: 266 HNIRCQTSHRT*VRRCYCASRHEALAFRGCQXG 364
H++RC+ HR VRR Y RH R C G
Sbjct: 242 HHMRCEIPHRC-VRRKYRIRRHSPFRLRNCWEG 273
>SB_1210| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 194
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +2
Query: 266 HNIRCQTSHRT*VRRCYCASRHEALAFRGCQXG 364
H++RC+ HR VRR Y RH R C G
Sbjct: 48 HHMRCEIPHRC-VRRKYRIRRHSPFRLRNCWEG 79
>SB_55989| Best HMM Match : zf-C2H2 (HMM E-Value=8e-08)
Length = 1011
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/62 (27%), Positives = 28/62 (45%)
Frame = +2
Query: 368 KPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPRTSMTLKDKPQK 547
+PK K + E+ EE +M ++K LGK V+ + T ++TL + Q
Sbjct: 654 QPKFKKTKEEEEFDKLLEEADAMTQQEVKNVKNIKLGKNVKTQLYTCEPCNITLNSQKQM 713
Query: 548 MQ 553
Q
Sbjct: 714 SQ 715
>SB_24762| Best HMM Match : Astacin (HMM E-Value=0)
Length = 733
Score = 29.9 bits (64), Expect = 1.9
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = -1
Query: 553 LHLLWLVFESH*STRNRDNCILHSFAEIS 467
++ LWL F + S+ + D C+LHS A ++
Sbjct: 415 IYTLWLDFSRYYSSASSDICVLHSIAHLA 443
>SB_51671| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 665
Score = 29.5 bits (63), Expect = 2.5
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +3
Query: 60 LKIQNGKSTRSRN-RSGYHVLLRWCLPAREGGDHRQRPGQQDHSVLCCVHRHRASHRRCR 236
L++ N + ++ + R GY L R C R + +R + H++L R +RC
Sbjct: 225 LRLVNTRDDKTHDKRPGYRKLSRVC-GGRRPNEPYERTARV-HTILSTETETRFCAKRCA 282
Query: 237 QEPGGDNPNNTIFDA 281
G +P NT F+A
Sbjct: 283 GTASGMDPKNTPFNA 297
>SB_9053| Best HMM Match : TIG (HMM E-Value=0)
Length = 2990
Score = 28.7 bits (61), Expect = 4.4
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +1
Query: 19 HVC*VVLRTSNKTD*KYKMAKAPAVGIDL 105
HVC +V T K K ++K PA GI+L
Sbjct: 1200 HVCNIVSNTETKITCKLDVSKTPAPGIEL 1228
>SB_53017| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 1488
Score = 28.7 bits (61), Expect = 4.4
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +1
Query: 415 PRGSQFHGAYENEGNCRSLSRQNCAECSYHGSAYFN 522
PRG Q Y G+C S+S++NC + S+ + +N
Sbjct: 1142 PRGKQI--PYGTAGDCYSVSQENCRKGSFKVTYQYN 1175
>SB_7343| Best HMM Match : EGF (HMM E-Value=0)
Length = 1233
Score = 28.3 bits (60), Expect = 5.9
Identities = 17/72 (23%), Positives = 30/72 (41%)
Frame = +1
Query: 112 TYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAITPTTQYSMPNVS 291
T++ + H I+ N G +TP + T A + + +TPT V+
Sbjct: 559 THTTTSITLHPSSAILDNSLGPASTPRTTISSTTHVSSTPIASSSMVMTPTAINPSATVT 618
Query: 292 SDVSSKMLLCKP 327
+ V S ++ KP
Sbjct: 619 TTVPSTSVVVKP 630
>SB_42630| Best HMM Match : Ets (HMM E-Value=0)
Length = 631
Score = 27.9 bits (59), Expect = 7.7
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = +2
Query: 101 IWVPRTLALVSSSTGRWRSSPTTRATGPLRLMLRSQTPSVSSEMPPRT 244
IW P+ L++S R+S + PLR L P VSS +P T
Sbjct: 42 IWPPKKQHLMASYPSTSRASASRSHLFPLRTGLPPVPPLVSSPLPSPT 89
>SB_34715| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 977
Score = 27.9 bits (59), Expect = 7.7
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = +2
Query: 101 IWVPRTLALVSSSTGRWRSSPTTRATGPLRLMLRSQTPSVSSEMPPRT 244
IW P+ L++S R+S + PLR L P VSS +P T
Sbjct: 388 IWPPKKQHLMASYPSTSRASASRSHLFPLRTGLPPVPPLVSSPLPSPT 435
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,680,371
Number of Sequences: 59808
Number of extensions: 521994
Number of successful extensions: 1691
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1468
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1686
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1693527500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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