Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021343
         (661 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY137766-1|AAM94344.1|   78|Anopheles gambiae heat shock protein...    91   3e-20
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            24   3.7  
AB090814-1|BAC57903.1|  499|Anopheles gambiae gag-like protein p...    23   6.5  

>AY137766-1|AAM94344.1|   78|Anopheles gambiae heat shock protein 70
           protein.
          Length = 78

 Score = 91.1 bits (216), Expect = 3e-20
 Identities = 43/50 (86%), Positives = 46/50 (92%)
 Frame = +1

Query: 511 AYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLI 660
           AYFNDSQRQATKDAG I+GLNV+RIINEPTAAA+AYGLDK   GERNVLI
Sbjct: 8   AYFNDSQRQATKDAGAIAGLNVMRIINEPTAAALAYGLDKNLKGERNVLI 57


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
 Frame = +3

Query: 72   NGKSTRSRNRSGYHVLLRWCLPAREGGDHR--QRPG 173
            +GK  RS +   +++LL    P REG  H+  Q PG
Sbjct: 1802 DGKYKRSYSYEPHNLLLSNLFPPREGFHHKAVQLPG 1837


>AB090814-1|BAC57903.1|  499|Anopheles gambiae gag-like protein
           protein.
          Length = 499

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 10/29 (34%), Positives = 13/29 (44%)
 Frame = +3

Query: 186 SVLCCVHRHRASHRRCRQEPGGDNPNNTI 272
           SVL C +  R     C   P G N N ++
Sbjct: 10  SVLGCAYTQRTKCAACLDSPDGMNGNESL 38


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 750,358
Number of Sequences: 2352
Number of extensions: 16671
Number of successful extensions: 22
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 65650335
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)