Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021342
         (698 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    29   0.028
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     23   2.4  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    23   2.4  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    23   2.4  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    23   3.2  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    23   3.2  
AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochr...    22   5.5  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    21   9.7  

>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 29.5 bits (63), Expect = 0.028
 Identities = 19/69 (27%), Positives = 25/69 (36%)
 Frame = +3

Query: 447 PLWKCCLPVCDETVGSENFNRTNAAGGLNPNYKIGDLMIVRDHINMMGFAGNNPLHGPND 626
           P W C       T+G   + R  A G   P +   D M +RD            LHGP  
Sbjct: 53  PRWGCARASSATTMGGPRYGRAAAQGMPYPRFPPYDRMDIRD---------RRSLHGPQQ 103

Query: 627 ERFGPRFPP 653
           +  G  + P
Sbjct: 104 QMDGQEYRP 112


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 16/68 (23%), Positives = 28/68 (41%)
 Frame = -1

Query: 317 YSYPVCYTFC**THPRAANDAMFGFSDILDSKKFAVSTNVS*EYPVFSFPLQSDPISGST 138
           + Y V Y F    HP    D  +GF ++ ++       N++ +    S  LQS P+    
Sbjct: 426 FQYYVSYDFYKMNHPVYHKDPHYGFHNVTNT----TLQNLTPQLNYISMKLQSFPLLSQR 481

Query: 137 FCVTKQFF 114
             +  + F
Sbjct: 482 HQIDAKMF 489


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -1

Query: 131 VTKQFFSTISFAFIGAITTLS 69
           + KQF  T  F F+  + TLS
Sbjct: 463 MVKQFLFTQKFTFVAGLATLS 483


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +3

Query: 582 MMGFAGNNPLHGPNDERFGPRFPP 653
           M G++    +  P+ + FGPR PP
Sbjct: 339 MTGYSAMG-MAAPHHQNFGPRHPP 361


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = -2

Query: 190 NIQFFHFHYNQIRFPAAPSA*PNNFSP 110
           N+Q +  H+N   FP      P+ F P
Sbjct: 388 NLQIYDMHHNPNVFPDPEKFDPDRFLP 414


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = -2

Query: 190 NIQFFHFHYNQIRFPAAPSA*PNNFSP 110
           N+Q +  H+N   FP      P+ F P
Sbjct: 388 NLQIYDMHHNPNVFPDPEKFDPDRFLP 414


>AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q3 protein.
          Length = 143

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 10/42 (23%), Positives = 16/42 (38%)
 Frame = -2

Query: 235 FSTARNLRSPLMFHKNIQFFHFHYNQIRFPAAPSA*PNNFSP 110
           F T   L+ P     ++  +  H+N   +P      P  F P
Sbjct: 90  FVTCNGLKLPKSTITHLHIYDLHHNPDIYPDPEKFDPERFRP 131


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +3

Query: 333 PNFPISTVEGHHGQLV 380
           PN P+S   G HG L+
Sbjct: 43  PNSPVSFSMGGHGSLL 58


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,233
Number of Sequences: 336
Number of extensions: 4151
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)