Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021340
         (706 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   1.4  
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       23   3.2  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   9.8  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    21   9.8  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    21   9.8  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 8/29 (27%), Positives = 14/29 (48%)
 Frame = -3

Query: 356  EACKVFHICIRVHVLHCKTWPQCRQTPSE 270
            E+C  F++C+  H++     P     P E
Sbjct: 1216 ESCSSFYVCVNGHLVPQNCAPGLHYNPEE 1244


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +3

Query: 294 RPSFTVKYMHSNAN 335
           +P FT KY H N N
Sbjct: 57  QPGFTGKYCHENIN 70


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +3

Query: 276 RXLSTLRPSFTVKYMH 323
           R + +LRP  T KY H
Sbjct: 281 RCIFSLRPGLTHKYTH 296


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = +1

Query: 526 WIPM*RVSQTFGTTYSGM 579
           W+ +  + Q  G  YSGM
Sbjct: 263 WVDLSHMMQQLGKAYSGM 280


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = +1

Query: 526 WIPM*RVSQTFGTTYSGM 579
           W+ +  + Q  G  YSGM
Sbjct: 263 WVDLSHMMQQLGKAYSGM 280


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,358
Number of Sequences: 336
Number of extensions: 3200
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18634795
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)