Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021340
         (706 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U39553-1|AAB07898.1|  370|Drosophila melanogaster nucleosome ass...    48   9e-06
BT001479-1|AAN71234.1|  370|Drosophila melanogaster LD21576p pro...    48   9e-06
AY058402-1|AAL13631.1|  375|Drosophila melanogaster GH17085p pro...    48   9e-06
AL109630-5|CAB65874.1|  375|Drosophila melanogaster EG:BACR7A4.1...    48   9e-06
AE014298-125|AAF45565.2|  375|Drosophila melanogaster CG3708-PA ...    48   9e-06
AE013599-3725|AAF47097.1|  370|Drosophila melanogaster CG5330-PA...    48   9e-06
AF172941-1|AAD56359.1| 1084|Drosophila melanogaster anon-15Ab pr...    29   8.1  
AE014298-2443|AAF48640.1| 1084|Drosophila melanogaster CG15865-P...    29   8.1  
AE014134-551|AAF51149.1| 2409|Drosophila melanogaster CG3524-PA ...    29   8.1  

>U39553-1|AAB07898.1|  370|Drosophila melanogaster nucleosome
           assembly protein NAP-1 protein.
          Length = 370

 Score = 48.4 bits (110), Expect = 9e-06
 Identities = 18/33 (54%), Positives = 25/33 (75%)
 Frame = +3

Query: 522 SMDPNVKGIPDFWYNIFRNVSMLSEMMQEHDEP 620
           S+  + KGIP FW  +FRN +++SEM+Q HDEP
Sbjct: 138 SIPKDAKGIPGFWLTVFRNTAIMSEMVQPHDEP 170


>BT001479-1|AAN71234.1|  370|Drosophila melanogaster LD21576p
           protein.
          Length = 370

 Score = 48.4 bits (110), Expect = 9e-06
 Identities = 18/33 (54%), Positives = 25/33 (75%)
 Frame = +3

Query: 522 SMDPNVKGIPDFWYNIFRNVSMLSEMMQEHDEP 620
           S+  + KGIP FW  +FRN +++SEM+Q HDEP
Sbjct: 138 SIPKDAKGIPGFWLTVFRNTAIMSEMVQPHDEP 170


>AY058402-1|AAL13631.1|  375|Drosophila melanogaster GH17085p
           protein.
          Length = 375

 Score = 48.4 bits (110), Expect = 9e-06
 Identities = 18/41 (43%), Positives = 28/41 (68%)
 Frame = +3

Query: 498 RRMTGYRASMDPNVKGIPDFWYNIFRNVSMLSEMMQEHDEP 620
           R++    A + P   G+P FW  +F+NV +LSE++Q+HDEP
Sbjct: 162 RQLRQKLAPVSPTTLGVPRFWLTVFQNVPLLSELVQDHDEP 202


>AL109630-5|CAB65874.1|  375|Drosophila melanogaster EG:BACR7A4.18
           protein.
          Length = 375

 Score = 48.4 bits (110), Expect = 9e-06
 Identities = 18/41 (43%), Positives = 28/41 (68%)
 Frame = +3

Query: 498 RRMTGYRASMDPNVKGIPDFWYNIFRNVSMLSEMMQEHDEP 620
           R++    A + P   G+P FW  +F+NV +LSE++Q+HDEP
Sbjct: 162 RQLRQKLAPVSPTTLGVPRFWLTVFQNVPLLSELVQDHDEP 202


>AE014298-125|AAF45565.2|  375|Drosophila melanogaster CG3708-PA
           protein.
          Length = 375

 Score = 48.4 bits (110), Expect = 9e-06
 Identities = 18/41 (43%), Positives = 28/41 (68%)
 Frame = +3

Query: 498 RRMTGYRASMDPNVKGIPDFWYNIFRNVSMLSEMMQEHDEP 620
           R++    A + P   G+P FW  +F+NV +LSE++Q+HDEP
Sbjct: 162 RQLRQKLAPVSPTTLGVPRFWLTVFQNVPLLSELVQDHDEP 202


>AE013599-3725|AAF47097.1|  370|Drosophila melanogaster CG5330-PA
           protein.
          Length = 370

 Score = 48.4 bits (110), Expect = 9e-06
 Identities = 18/33 (54%), Positives = 25/33 (75%)
 Frame = +3

Query: 522 SMDPNVKGIPDFWYNIFRNVSMLSEMMQEHDEP 620
           S+  + KGIP FW  +FRN +++SEM+Q HDEP
Sbjct: 138 SIPKDAKGIPGFWLTVFRNTAIMSEMVQPHDEP 170


>AF172941-1|AAD56359.1| 1084|Drosophila melanogaster anon-15Ab
           protein.
          Length = 1084

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +2

Query: 413 CLNPWRDDTEEEELARAVQNAAITEGEEKKDD 508
           CL PW + T++EE + A  ++   E +E   D
Sbjct: 369 CLPPWLEQTDDEESSSAASSSDEDEKDEANSD 400


>AE014298-2443|AAF48640.1| 1084|Drosophila melanogaster CG15865-PA
           protein.
          Length = 1084

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +2

Query: 413 CLNPWRDDTEEEELARAVQNAAITEGEEKKDD 508
           CL PW + T++EE + A  ++   E +E   D
Sbjct: 369 CLPPWLEQTDDEESSSAASSSDEDEKDEANSD 400


>AE014134-551|AAF51149.1| 2409|Drosophila melanogaster CG3524-PA
           protein.
          Length = 2409

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
 Frame = +3

Query: 147 HLLKSGVTRNEMIAAITNRLHAEAMASLPPNVRR-RIAP*ELFRRXLSTLRPSFTVKYMH 323
           HL  +G   N +I+ +   L  +A+  +P N     IAP  LFR  L +L P  +   + 
Sbjct: 754 HLASAGYFINNLISPV---LFHQAVKRIPQNALIVEIAPHGLFRAILRSLSPQISYVSLM 810

Query: 324 SNANMKNFTSL 356
              +  NF  L
Sbjct: 811 QRGHANNFEFL 821


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,540,204
Number of Sequences: 53049
Number of extensions: 603070
Number of successful extensions: 1592
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1553
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1592
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3108380451
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)