Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021339
         (672 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            25   2.9  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            25   2.9  
X95912-1|CAA65156.1|  696|Anopheles gambiae immune factor protein.     24   3.8  
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    23   8.8  

>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = -3

Query: 451 SIMTLQAHGHPRFIRIIRLVEFSSDHNDAQFTFGN 347
           S+  L  + HP+ +     V FSS H D +  FGN
Sbjct: 209 SVYMLDNNYHPKLVGRAENVPFSSAH-DERILFGN 242


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = -3

Query: 451 SIMTLQAHGHPRFIRIIRLVEFSSDHNDAQFTFGN 347
           S+  L  + HP+ +     V FSS H D +  FGN
Sbjct: 209 SVYMLDNNYHPKLVGRAENVPFSSAH-DERILFGN 242


>X95912-1|CAA65156.1|  696|Anopheles gambiae immune factor protein.
          Length = 696

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = -3

Query: 310 RPIVLLCNHTVI*ESIKVVFLYSKAIFNVW 221
           + I+LLC   V+ E IKV F   K    VW
Sbjct: 243 KEIILLCEK-VVKEDIKVRFFEKKGNATVW 271


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
 Frame = -3

Query: 583 INSDRSKACLVE--HLAYPIPLNMASKHSNHYNFLIL 479
           I+ + S +C ++  +L     LN    HSNHY  L+L
Sbjct: 184 ISLNSSSSCFLDVLNLHELYQLNGVHNHSNHYLDLVL 220


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 690,934
Number of Sequences: 2352
Number of extensions: 13140
Number of successful extensions: 42
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 67322955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)