Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021339
         (672 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    24   1.5  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   3.5  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          22   4.6  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      22   4.6  
EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate isome...    21   8.1  

>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = -2

Query: 482 IRNRIYRTEVFDHDPAG 432
           +RN IY+TE FD   AG
Sbjct: 17  LRNLIYKTEAFDSLHAG 33


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -2

Query: 614  QDQMEASEANNQQRQVKSMSR 552
            +DQ   +EA NQQ+Q  S  +
Sbjct: 1298 RDQRAMTEARNQQQQASSQQQ 1318


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = +1

Query: 448 SKTSVR*ILFLILKNYNGWNVSKPY 522
           +KTS +   ++I  NY+GW ++  Y
Sbjct: 190 TKTSGKYKEYIIPANYSGWYLNHDY 214


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = +1

Query: 448 SKTSVR*ILFLILKNYNGWNVSKPY 522
           +KTS +   ++I  NY+GW ++  Y
Sbjct: 190 TKTSGKYKEYIIPANYSGWYLNHDY 214


>EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate
           isomerase protein.
          Length = 247

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 7/24 (29%), Positives = 14/24 (58%)
 Frame = -1

Query: 588 KQSTATGQKHVSWNILLILYH*IW 517
           +Q+ A   K  SW+ +++ Y  +W
Sbjct: 144 RQTKAIANKINSWDNVVVAYEPVW 167


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,077
Number of Sequences: 438
Number of extensions: 4054
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20343105
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)