Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021335
(589 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70; Eukaryo... 112 7e-24
UniRef50_Q4U6T4 Cluster: SL3; n=1; Brugia malayi|Rep: SL3 - Brug... 107 2e-22
UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96; Eukaryo... 107 2e-22
UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1; ... 102 5e-21
UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2; Scleroti... 102 5e-21
UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1, pu... 98 2e-19
UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n... 91 2e-17
UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1, pu... 87 3e-16
UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia b... 87 3e-16
UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2; Ol... 87 4e-16
UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1; L... 85 9e-16
UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL... 83 6e-15
UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1; Encephal... 81 1e-14
UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2; Cryptomo... 81 2e-14
UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5; E... 75 9e-13
UniRef50_Q3LWC7 Cluster: Ribosomal protein L4A; n=1; Bigelowiell... 75 1e-12
UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3; Trich... 67 3e-10
UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal ... 48 2e-04
UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lambli... 46 7e-04
UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8; Archaea... 44 0.003
UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13; Euryar... 42 0.014
UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9; Archaea... 40 0.043
UniRef50_A3C3B6 Cluster: Putative uncharacterized protein; n=3; ... 38 0.23
UniRef50_A0RVX5 Cluster: Ribosomal protein L4; n=2; Thermoprotei... 38 0.23
UniRef50_UPI0000EBE356 Cluster: PREDICTED: hypothetical protein;... 37 0.30
UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2; Euryarc... 37 0.30
UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3; Archaea... 36 0.53
UniRef50_Q5NB71 Cluster: Putative uncharacterized protein P0431F... 36 0.70
UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;... 36 0.70
UniRef50_A7SGS6 Cluster: Predicted protein; n=1; Nematostella ve... 36 0.70
UniRef50_A6WDW7 Cluster: Putative uncharacterized protein; n=1; ... 36 0.93
UniRef50_Q6H5Q4 Cluster: Putative uncharacterized protein OJ1031... 35 1.2
UniRef50_A5K2A3 Cluster: Putative uncharacterized protein; n=1; ... 35 1.2
UniRef50_A3TMT4 Cluster: Hypothetical short chain dehydrogenase;... 34 2.8
UniRef50_Q0FF01 Cluster: Probable fatty acid desaturase protein;... 33 3.7
UniRef50_Q4FXU7 Cluster: Putative uncharacterized protein; n=2; ... 33 3.7
UniRef50_Q9DDF7 Cluster: Homeodomain protein DlxC; n=5; Vertebra... 33 4.9
UniRef50_A5EUH4 Cluster: Putative uncharacterized protein; n=2; ... 33 4.9
UniRef50_Q82N62 Cluster: Putative phosphotriesterase-family prot... 33 6.5
UniRef50_Q9NGR9 Cluster: Nuclear protein EAST; n=3; Drosophila m... 33 6.5
UniRef50_Q5TV94 Cluster: ENSANGP00000029021; n=2; cellular organ... 33 6.5
UniRef50_O46048 Cluster: EG:133E12.4 protein; n=1; Drosophila me... 33 6.5
UniRef50_UPI00015B62E9 Cluster: PREDICTED: similar to Single min... 32 8.6
UniRef50_UPI0000DB70FB Cluster: PREDICTED: similar to achintya C... 32 8.6
UniRef50_Q2R8P4 Cluster: Putative uncharacterized protein; n=3; ... 32 8.6
>UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70;
Eukaryota|Rep: 60S ribosomal protein L4 - Homo sapiens
(Human)
Length = 427
Score = 112 bits (269), Expect = 7e-24
Identities = 58/101 (57%), Positives = 61/101 (60%), Gaps = 1/101 (0%)
Frame = +1
Query: 256 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPXKPWXXXXXXXXXX 435
GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAP K W
Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTT 118
Query: 436 XXXXXXXXXXXXXXXXXXXSG*RTLIEKFP-IPLVVADKVQ 555
IE+ P +PLVV DKV+
Sbjct: 119 QKRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVE 159
Score = 74.1 bits (174), Expect = 2e-12
Identities = 35/57 (61%), Positives = 44/57 (77%)
Frame = +2
Query: 80 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK 250
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSE 56
>UniRef50_Q4U6T4 Cluster: SL3; n=1; Brugia malayi|Rep: SL3 - Brugia
malayi (Filarial nematode worm)
Length = 306
Score = 107 bits (257), Expect = 2e-22
Identities = 47/48 (97%), Positives = 47/48 (97%)
Frame = +1
Query: 256 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPXK 399
GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAP K
Sbjct: 176 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK 223
Score = 54.0 bits (124), Expect = 2e-06
Identities = 26/49 (53%), Positives = 34/49 (69%)
Frame = +2
Query: 107 VYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKE 253
VY++KSE + LP VF+AP+RPD+V+ VH + KN RQPY VS E
Sbjct: 127 VYNDKSEPTDTQIR-LPGVFRAPLRPDIVSFVHDQIRKNKRQPYAVSVE 174
>UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96;
Eukaryota|Rep: 60S ribosomal protein L4 - Drosophila
melanogaster (Fruit fly)
Length = 401
Score = 107 bits (257), Expect = 2e-22
Identities = 47/48 (97%), Positives = 47/48 (97%)
Frame = +1
Query: 256 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPXK 399
GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAP K
Sbjct: 62 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK 109
Score = 72.1 bits (169), Expect = 9e-12
Identities = 35/59 (59%), Positives = 44/59 (74%)
Frame = +2
Query: 74 MSLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK 250
MSL ARPLVSVY+EK+E + LP VFKAPIRPD+VN+VH + +N+RQ Y VS+
Sbjct: 1 MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSE 59
>UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 349
Score = 102 bits (245), Expect = 5e-21
Identities = 44/50 (88%), Positives = 45/50 (90%)
Frame = +1
Query: 256 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPXKPW 405
GHQTSAESWGTGRAVARIPRV GGGTHR+GQ AFGNMCR GRMFAP K W
Sbjct: 35 GHQTSAESWGTGRAVARIPRVSGGGTHRAGQAAFGNMCRSGRMFAPTKVW 84
>UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2;
Sclerotiniaceae|Rep: 60S ribosomal protein L4 -
Sclerotinia sclerotiorum 1980
Length = 373
Score = 102 bits (245), Expect = 5e-21
Identities = 44/50 (88%), Positives = 45/50 (90%)
Frame = +1
Query: 256 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPXKPW 405
GHQTSAESWGTGRAVARIPRV GGGTHR+GQ AFGNMCR GRMFAP K W
Sbjct: 58 GHQTSAESWGTGRAVARIPRVSGGGTHRAGQAAFGNMCRSGRMFAPTKVW 107
Score = 61.7 bits (143), Expect = 1e-08
Identities = 30/55 (54%), Positives = 36/55 (65%)
Frame = +2
Query: 89 ARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKE 253
+RP VSV S T G PLP VF +PIRPD+V VH M+KN RQPY VS++
Sbjct: 3 SRPTVSVLSADG-TATGTTIPLPKVFTSPIRPDIVQTVHTGMAKNKRQPYAVSEK 56
>UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=5; Plasmodium|Rep: 60S ribosomal subunit
protein L4/L1, putative - Plasmodium chabaudi
Length = 411
Score = 97.9 bits (233), Expect = 2e-19
Identities = 42/52 (80%), Positives = 45/52 (86%)
Frame = +1
Query: 250 GGGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPXKPW 405
G G++TSAESWGTGRAVARIPRV GGGTHR+GQ AFGNMCRGG MF P K W
Sbjct: 57 GAGYETSAESWGTGRAVARIPRVPGGGTHRAGQAAFGNMCRGGGMFNPTKIW 108
Score = 48.0 bits (109), Expect = 2e-04
Identities = 23/55 (41%), Positives = 33/55 (60%)
Frame = +2
Query: 80 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCV 244
++ RPL +VY + V G + +P VF+ PIR DL+ + +MSKN R PY V
Sbjct: 1 MATIRPLANVYGINGKKVVGEVE-IPVVFQTPIRHDLIEYIFSNMSKNIRHPYAV 54
>UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n=4;
Cryptosporidium|Rep: 60S ribosomal protein-like,
putative - Cryptosporidium parvum Iowa II
Length = 394
Score = 91.1 bits (216), Expect = 2e-17
Identities = 40/50 (80%), Positives = 42/50 (84%)
Frame = +1
Query: 256 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPXKPW 405
GHQ SAESWGTGRAVARIPRV GT RSGQGAFGNMCRGG MF+P K +
Sbjct: 60 GHQHSAESWGTGRAVARIPRVSASGTSRSGQGAFGNMCRGGHMFSPNKTY 109
Score = 54.8 bits (126), Expect = 1e-06
Identities = 27/56 (48%), Positives = 36/56 (64%)
Frame = +2
Query: 80 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVS 247
++ ARP+VSV+ T ++ PLP VF +P+R DLV V +MSKN RQ Y VS
Sbjct: 1 MTFARPIVSVFPSNDSTKATSSIPLPTVFVSPLRHDLVRYVFTNMSKNKRQAYGVS 56
>UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=2; Theileria|Rep: 60S ribosomal subunit
protein L4/L1, putative - Theileria annulata
Length = 426
Score = 87.0 bits (206), Expect = 3e-16
Identities = 35/50 (70%), Positives = 41/50 (82%)
Frame = +1
Query: 256 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPXKPW 405
G+QTSA SWGTGRA++R PRV+GGGTHRSGQ A+ N CR G MFAP + W
Sbjct: 58 GYQTSARSWGTGRALSRTPRVKGGGTHRSGQAAYANFCRAGGMFAPTRTW 107
Score = 54.8 bits (126), Expect = 1e-06
Identities = 27/55 (49%), Positives = 37/55 (67%)
Frame = +2
Query: 86 VARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK 250
V RP+VSV+S +E G+ +P VF P+R DLV+ VH +MSKN RQ Y +S+
Sbjct: 2 VHRPVVSVFSVSTEKRMGSTI-MPRVFSTPLRSDLVHYVHTNMSKNKRQAYAISR 55
>UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia
bovis|Rep: Ribosomal protein RPL4A - Babesia bovis
Length = 360
Score = 87.0 bits (206), Expect = 3e-16
Identities = 34/50 (68%), Positives = 42/50 (84%)
Frame = +1
Query: 256 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPXKPW 405
G+QTSA SWGTGRA+AR+PRV+GGGTHR+GQ A+ N CR G M+AP + W
Sbjct: 58 GYQTSARSWGTGRAMARVPRVKGGGTHRAGQAAYANFCRAGGMYAPTRVW 107
Score = 50.0 bits (114), Expect = 4e-05
Identities = 28/53 (52%), Positives = 33/53 (62%)
Frame = +2
Query: 92 RPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK 250
RP VSV++ GA +P VF AP+R DLV VH +MSKN RQ Y VSK
Sbjct: 4 RPEVSVHNATDGERVGATL-MPKVFSAPLRLDLVRIVHTNMSKNRRQAYAVSK 55
>UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2;
Oligohymenophorea|Rep: Ribosomal protein L4, putative -
Paramecium tetraurelia
Length = 406
Score = 86.6 bits (205), Expect = 4e-16
Identities = 39/50 (78%), Positives = 39/50 (78%)
Frame = +1
Query: 256 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPXKPW 405
G Q SAESWGTGRAVARIPRV G GTHRSGQ AFGN CR GRM P K W
Sbjct: 60 GMQHSAESWGTGRAVARIPRVSGSGTHRSGQAAFGNQCRKGRMSLPIKVW 109
Score = 52.8 bits (121), Expect = 6e-06
Identities = 26/54 (48%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Frame = +2
Query: 95 PLVSVYSEKSET-VQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKE 253
PLVSV+S T V PLP VF+ PIRPD+V+ VH +++KN RQ + V+ +
Sbjct: 5 PLVSVFSADDSTKVTAKHIPLPAVFQTPIRPDIVSFVHTNIAKNRRQAHAVNPQ 58
>UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1;
Leishmania major strain Friedlin|Rep: Ribosomal protein
L1a, putative - Leishmania major strain Friedlin
Length = 432
Score = 85.4 bits (202), Expect = 9e-16
Identities = 38/48 (79%), Positives = 39/48 (81%)
Frame = +1
Query: 256 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPXK 399
G SA SWGTGRAVARIPR+ GGGT SG GAFGNMCRGGRMFAP K
Sbjct: 58 GMNHSAHSWGTGRAVARIPRISGGGTSTSGAGAFGNMCRGGRMFAPTK 105
Score = 64.5 bits (150), Expect = 2e-09
Identities = 32/54 (59%), Positives = 39/54 (72%)
Frame = +2
Query: 89 ARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK 250
ARP VSVYS S++V G PLP VF APIR D+V VH +M+KNSRQ Y V++
Sbjct: 3 ARPSVSVYSASSDSVVGTC-PLPAVFTAPIRSDIVKFVHTNMAKNSRQAYAVNR 55
>UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL4 -
Streblomastix strix
Length = 492
Score = 82.6 bits (195), Expect = 6e-15
Identities = 34/50 (68%), Positives = 39/50 (78%)
Frame = +1
Query: 256 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPXKPW 405
GHQ SAESWGTGRAVAR+PR+ G GT R+GQ AF N RGG M++P K W
Sbjct: 59 GHQHSAESWGTGRAVARVPRISGSGTSRNGQAAFANSARGGHMYSPLKVW 108
Score = 38.7 bits (86), Expect = 0.100
Identities = 18/47 (38%), Positives = 30/47 (63%)
Frame = +2
Query: 98 LVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPY 238
L +VY+ + A P + +PIRPD+V+ VH++++KN RQP+
Sbjct: 7 LTTVYNTDGKARDTTAVPSVIRY-SPIRPDVVHFVHMNLAKNERQPF 52
>UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L4 -
Encephalitozoon cuniculi
Length = 335
Score = 81.4 bits (192), Expect = 1e-14
Identities = 35/51 (68%), Positives = 40/51 (78%)
Frame = +1
Query: 247 QGGGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPXK 399
+ G Q SAESWGTGRA+AR+PRV+GGGT R+GQGAF N CR GRM P K
Sbjct: 53 KNAGMQHSAESWGTGRAIARVPRVKGGGTRRAGQGAFANFCRKGRMAHPTK 103
Score = 35.1 bits (77), Expect = 1.2
Identities = 20/50 (40%), Positives = 25/50 (50%)
Frame = +2
Query: 101 VSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK 250
++ Y TV+ LP VF PIR DLV + +RQPY VSK
Sbjct: 5 INCYEADGVTVKKTLD-LPEVFSVPIRQDLVLKTYSLYRMKTRQPYAVSK 53
>UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2;
Cryptomonadaceae|Rep: 60s ribosomal protein L1 -
Guillardia theta (Cryptomonas phi)
Length = 255
Score = 81.0 bits (191), Expect = 2e-14
Identities = 35/50 (70%), Positives = 38/50 (76%)
Frame = +1
Query: 256 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPXKPW 405
G TSA SWGTGRAV+R+PRV G GTHRSGQGA N CRGGR+F P W
Sbjct: 54 GMGTSAVSWGTGRAVSRVPRVPGSGTHRSGQGAIANFCRGGRIFNPTTIW 103
>UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L4 - Entamoeba histolytica HM-1:IMSS
Length = 431
Score = 75.4 bits (177), Expect = 9e-13
Identities = 34/48 (70%), Positives = 38/48 (79%)
Frame = +1
Query: 256 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPXK 399
G Q SA SWGTGRAVARIPR+ G G+ R+GQGAFGNM R G MF+P K
Sbjct: 59 GKQHSAISWGTGRAVARIPRISGSGSGRNGQGAFGNMTRKGHMFSPLK 106
Score = 44.4 bits (100), Expect = 0.002
Identities = 23/53 (43%), Positives = 33/53 (62%)
Frame = +2
Query: 89 ARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVS 247
+RP V++Y + + LP VF APIR D+V+ V+ + SKN+RQP VS
Sbjct: 3 SRPFVTIYDGITGEAEKTQVRLPAVFLAPIRGDVVHFVYRNQSKNTRQPEGVS 55
>UniRef50_Q3LWC7 Cluster: Ribosomal protein L4A; n=1; Bigelowiella
natans|Rep: Ribosomal protein L4A - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 278
Score = 74.9 bits (176), Expect = 1e-12
Identities = 29/50 (58%), Positives = 39/50 (78%)
Frame = +1
Query: 238 LREQGGGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMF 387
++ G+Q SA+SWG GR +ARIPR++G GT ++GQGA NMCRGGR+F
Sbjct: 54 IKYNNSGNQVSAKSWGPGRGLARIPRIKGSGTRKAGQGALANMCRGGRLF 103
>UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3;
Trichomonas vaginalis G3|Rep: Ribosomal protein,
putative - Trichomonas vaginalis G3
Length = 370
Score = 66.9 bits (156), Expect = 3e-10
Identities = 28/46 (60%), Positives = 34/46 (73%)
Frame = +1
Query: 256 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAP 393
G + SA SWGTGRA A +PRV G G++R+GQGA+ N CRGG F P
Sbjct: 56 GKKVSAISWGTGRAKACVPRVNGSGSNRNGQGAYANFCRGGHRFNP 101
Score = 38.7 bits (86), Expect = 0.100
Identities = 17/51 (33%), Positives = 36/51 (70%)
Frame = +2
Query: 86 VARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPY 238
++R V+V +++ + + + LP VF PIR ++V +V+V+++KN++QP+
Sbjct: 1 MSRQTVNVLTQEGQ--KASTIELPKVFDTPIRAEVVKEVYVNLAKNAQQPH 49
>UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal
protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L4 - Canis familiaris
Length = 248
Score = 48.0 bits (109), Expect = 2e-04
Identities = 20/28 (71%), Positives = 23/28 (82%)
Frame = +1
Query: 247 QGGGHQTSAESWGTGRAVARIPRVRGGG 330
+ G+QTSAESWGTGRA +PRVRGGG
Sbjct: 46 ESAGYQTSAESWGTGRARGPMPRVRGGG 73
>UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_79_45017_44067 - Giardia lamblia
ATCC 50803
Length = 316
Score = 46.0 bits (104), Expect = 7e-04
Identities = 24/46 (52%), Positives = 27/46 (58%)
Frame = +1
Query: 256 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAP 393
G Q +A SWG GRAVAR+PR G G GA+ N RGG M P
Sbjct: 55 GVQCTAHSWGPGRAVARLPRKHG------GIGAYANFARGGHMAHP 94
Score = 44.4 bits (100), Expect = 0.002
Identities = 22/52 (42%), Positives = 28/52 (53%)
Frame = +2
Query: 95 PLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK 250
P V V+ V A P P VF P+RPD++N VH + K R PY VS+
Sbjct: 3 PTVKVFGPTGTQV--AELPRPKVFNVPLRPDIINFVHTQLRKCLRTPYAVSR 52
>UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8;
Archaea|Rep: 50S ribosomal protein L4P - Aeropyrum
pernix
Length = 272
Score = 43.6 bits (98), Expect = 0.003
Identities = 28/68 (41%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Frame = +1
Query: 205 RFYVQELEAALL---REQGGGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRG 375
R ++ E A L R+ G +TSA S G GR VAR+PR++G S + A NM RG
Sbjct: 46 RAFLSEFTARLQPKGRDPMAGKRTSAVSLGVGRGVARVPRIKG-----SLRAALVNMARG 100
Query: 376 GRMFAPXK 399
GR P +
Sbjct: 101 GRAAHPPR 108
>UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanopyrus kandleri
Length = 260
Score = 41.5 bits (93), Expect = 0.014
Identities = 22/53 (41%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Frame = +1
Query: 256 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMF---APXKPW 405
G +TSAESWG G VA +PRV+G +G+ A GG+ P K W
Sbjct: 53 GFRTSAESWGAGHGVAMVPRVKGRRHPAAGRAARVAQAVGGQKAHAPTPEKDW 105
Score = 32.3 bits (70), Expect = 8.6
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +2
Query: 95 PLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPY 238
P+ ++ E+ +TV+ LP F+ P+R DL+ ++ N RQPY
Sbjct: 4 PVFNLEGEEVDTVE-----LPSFFEEPVRKDLIRRAVLAAQANRRQPY 46
>UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9;
Archaea|Rep: 50S ribosomal protein L4P - Pyrobaculum
aerophilum
Length = 283
Score = 39.9 bits (89), Expect = 0.043
Identities = 22/51 (43%), Positives = 27/51 (52%)
Frame = +1
Query: 247 QGGGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPXK 399
+G G + S ES+G G +ARIPR +G R G F RGGR P K
Sbjct: 76 EGAGKEHSCESFGVGLGIARIPRYKGSLWPR---GCFAPNTRGGRRAHPPK 123
>UniRef50_A3C3B6 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 150
Score = 37.5 bits (83), Expect = 0.23
Identities = 22/47 (46%), Positives = 24/47 (51%)
Frame = +1
Query: 241 REQGGGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGR 381
RE GGG A+SW TGRA A + R R GG R A N G R
Sbjct: 30 REGGGG----AQSWATGRAAAELGRGRKGGRRRGLAQAAANSGEGNR 72
>UniRef50_A0RVX5 Cluster: Ribosomal protein L4; n=2;
Thermoprotei|Rep: Ribosomal protein L4 - Cenarchaeum
symbiosum
Length = 271
Score = 37.5 bits (83), Expect = 0.23
Identities = 26/105 (24%), Positives = 41/105 (39%), Gaps = 2/105 (1%)
Frame = +1
Query: 256 GHQTSAESWG--TGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPXKPWXXXXXXXX 429
G SA+S TG ARI R++GGG R G+ RGGR P K
Sbjct: 53 GMDVSADSLNPPTGHGQARIARMKGGGGRRRGEAGEVASIRGGRQAHPPKVQKVIHKKIN 112
Query: 430 XXXXXXXXXXXXXXXXXXXXXSG*RTLIEKFPIPLVVADKVQEIN 564
+G +I+ +P+V++D ++ ++
Sbjct: 113 KKEKKLALCSAIAATASKSTVAGRGHIIDGIELPIVISDDIESVS 157
>UniRef50_UPI0000EBE356 Cluster: PREDICTED: hypothetical protein;
n=1; Bos taurus|Rep: PREDICTED: hypothetical protein -
Bos taurus
Length = 220
Score = 37.1 bits (82), Expect = 0.30
Identities = 18/41 (43%), Positives = 23/41 (56%)
Frame = +1
Query: 223 LEAALLREQGGGHQTSAESWGTGRAVARIPRVRGGGTHRSG 345
L A+ R GGG +T+ + G G AR+P RGG RSG
Sbjct: 100 LSASSGRAAGGGRETATRAGGGGPRSARVPGCRGGARSRSG 140
>UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 259
Score = 37.1 bits (82), Expect = 0.30
Identities = 20/48 (41%), Positives = 28/48 (58%)
Frame = +1
Query: 256 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPXK 399
G +T+AES+G+GR A +PRV+G S + AF GGR P +
Sbjct: 54 GKRTTAESFGSGRGAAMVPRVKG-----SSKAAFVPQAIGGRKAHPPR 96
>UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3;
Archaea|Rep: 50S ribosomal protein L4P - Sulfolobus
solfataricus
Length = 267
Score = 36.3 bits (80), Expect = 0.53
Identities = 20/51 (39%), Positives = 28/51 (54%)
Frame = +1
Query: 241 REQGGGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAP 393
R+ G +TSAES+G +AR+PRV+ SG+ A GGR+ P
Sbjct: 55 RDPNAGKRTSAESFGINLGMARVPRVK-----NSGEAALAPNTVGGRLAFP 100
>UniRef50_Q5NB71 Cluster: Putative uncharacterized protein
P0431F01.18; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
P0431F01.18 - Oryza sativa subsp. japonica (Rice)
Length = 320
Score = 35.9 bits (79), Expect = 0.70
Identities = 19/42 (45%), Positives = 21/42 (50%)
Frame = +1
Query: 253 GGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGG 378
G AE + T AR PR GGG HR GA G + RGG
Sbjct: 186 GAPHAEAEPF-TAPLRARRPRAAGGGKHRGAHGANGGVARGG 226
>UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;
Ostreococcus tauri|Rep: Ribosomal protein
RPL1/RPL2/RL4L4 - Ostreococcus tauri
Length = 404
Score = 35.9 bits (79), Expect = 0.70
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +2
Query: 137 GAAKPLPFVFKAPIRPDLVNDVHVSMSKN 223
GA+ +P VF +PIR D+VN VH ++KN
Sbjct: 15 GASCAMPEVFLSPIRADIVNAVHTGLAKN 43
>UniRef50_A7SGS6 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 263
Score = 35.9 bits (79), Expect = 0.70
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = -1
Query: 385 TYVHHDTCYRRHPDRTYEYHHHXHAEFGRQHVQYPMIQHWFGDH 254
TY+ H Y +HP T+ YHH H + ++ Q+P + H + H
Sbjct: 114 TYLTHR--YHQHPQVTHRYHHQ-HPQVTHRYHQHPQVTHRYHQH 154
Score = 34.7 bits (76), Expect = 1.6
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = -1
Query: 361 YRRHPDRTYEYHHHXHAEFGRQHVQYPMIQHWFGDH 254
Y +HP T+ YHH R H Q P I H + H
Sbjct: 75 YHQHPQVTHRYHHQHPQVTYRYHHQQPQITHRYHQH 110
>UniRef50_A6WDW7 Cluster: Putative uncharacterized protein; n=1;
Kineococcus radiotolerans SRS30216|Rep: Putative
uncharacterized protein - Kineococcus radiotolerans
SRS30216
Length = 366
Score = 35.5 bits (78), Expect = 0.93
Identities = 25/71 (35%), Positives = 33/71 (46%), Gaps = 5/71 (7%)
Frame = +1
Query: 148 APPVRVQGAH-PSGPGQ*CSRFYVQELEAALLREQ----GGGHQTSAESWGTGRAVARIP 312
APP V H GPG+ + V ++ R + GGGHQ S + T A AR+
Sbjct: 68 APPASVWAVHVDGGPGERAALVLVDRVDDGGRRTELLAGGGGHQASLAAT-TPAAAARLG 126
Query: 313 RVRGGGTHRSG 345
+V G HR G
Sbjct: 127 QVLGEAAHRRG 137
>UniRef50_Q6H5Q4 Cluster: Putative uncharacterized protein
OJ1031_C12.31; n=2; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
OJ1031_C12.31 - Oryza sativa subsp. japonica (Rice)
Length = 214
Score = 35.1 bits (77), Expect = 1.2
Identities = 37/107 (34%), Positives = 47/107 (43%), Gaps = 1/107 (0%)
Frame = +1
Query: 70 RNESIGSPTFSVGVFREE*DGAGCSQAPPVRVQGAHPSGPGQ*CSRFYVQELEAALLREQ 249
R ++G P VG R GA + P +G GP R + ELEA + +
Sbjct: 32 RRGAVGRPG-GVGARRR--GGAAAASGPAACGRGGVVEGPS---GRRH-GELEAVAAKWR 84
Query: 250 GGGHQTSAESWGTGRAVARIPRVRGGGTH-RSGQGAFGNMCRGGRMF 387
GG TS +G A A PR GGG+ RSG A+ RGG F
Sbjct: 85 SGGVATSRRWRPSGIAAAWRPRGGGGGSEWRSGAAAW--RARGGAAF 129
>UniRef50_A5K2A3 Cluster: Putative uncharacterized protein; n=1;
Plasmodium vivax|Rep: Putative uncharacterized protein -
Plasmodium vivax
Length = 1847
Score = 35.1 bits (77), Expect = 1.2
Identities = 16/66 (24%), Positives = 26/66 (39%), Gaps = 1/66 (1%)
Frame = -1
Query: 382 YVHHDTCYRRHPDRTYEYHHHXHAEFG-RQHVQYPMIQHWFGDHLLAHAVGLPRVLGHRN 206
+ HHD + H + +H H H + H + H+ H AH P + H
Sbjct: 743 HAHHDHAHHDHAHHDHAHHDHAHHDHAHHDHAHHDHAHHYHPHHEHAHHYH-PHIRAHEK 801
Query: 205 VNIIDQ 188
+I D+
Sbjct: 802 KDIFDE 807
>UniRef50_A3TMT4 Cluster: Hypothetical short chain dehydrogenase;
n=1; Janibacter sp. HTCC2649|Rep: Hypothetical short
chain dehydrogenase - Janibacter sp. HTCC2649
Length = 217
Score = 33.9 bits (74), Expect = 2.8
Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = +1
Query: 238 LREQGGGHQTSAESWGTGRAVARI-PRVRGGGTHRSGQGAFGNMCRGG 378
+R+QG GH + SWG + + PRV G H ++CR G
Sbjct: 123 MRDQGFGHVVNVTSWGVQKKQPKFSPRVEVGARHMGPHRRARDLCRRG 170
>UniRef50_Q0FF01 Cluster: Probable fatty acid desaturase protein;
n=1; alpha proteobacterium HTCC2255|Rep: Probable fatty
acid desaturase protein - alpha proteobacterium HTCC2255
Length = 347
Score = 33.5 bits (73), Expect = 3.7
Identities = 18/49 (36%), Positives = 22/49 (44%)
Frame = -1
Query: 382 YVHHDTCYRRHPDRTYEYHHHXHAEFGRQHVQYPMIQHWFGDHLLAHAV 236
YV H H DR E+ H A G H P+I HWF ++ H V
Sbjct: 238 YVQHQF-EDTHWDREEEWDMHKAALEGSSHYDLPLILHWFSANIGIHHV 285
>UniRef50_Q4FXU7 Cluster: Putative uncharacterized protein; n=2;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major strain Friedlin
Length = 534
Score = 33.5 bits (73), Expect = 3.7
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = +3
Query: 327 WYS*VRSGCLR*HVSWWTYVRPXXXXXXXXPSRQP 431
W VR C+R HV WW +VR P QP
Sbjct: 134 WNEHVRRRCVRQHVPWWPHVRADEDLPPLAPQDQP 168
>UniRef50_Q9DDF7 Cluster: Homeodomain protein DlxC; n=5;
Vertebrata|Rep: Homeodomain protein DlxC - Petromyzon
marinus (Sea lamprey)
Length = 342
Score = 33.1 bits (72), Expect = 4.9
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -1
Query: 325 HHXHAEFGRQHVQYPMIQHWFGDH 254
HH H + + H QYP + WFG H
Sbjct: 287 HHQHQQQQQLHAQYPPVGPWFGGH 310
>UniRef50_A5EUH4 Cluster: Putative uncharacterized protein; n=2;
Bradyrhizobiaceae|Rep: Putative uncharacterized protein
- Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182)
Length = 163
Score = 33.1 bits (72), Expect = 4.9
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = +1
Query: 232 ALLREQGGGHQTSAESWGTGRAVARIPRVRGGGTHRSG 345
AL+ E GG + + W GR V R PR RG R+G
Sbjct: 121 ALVIEVFGGRSSGSYRWNGGRFVPRSPRTRGERNRRAG 158
>UniRef50_Q82N62 Cluster: Putative phosphotriesterase-family
protein; n=2; Streptomyces|Rep: Putative
phosphotriesterase-family protein - Streptomyces
avermitilis
Length = 303
Score = 32.7 bits (71), Expect = 6.5
Identities = 20/54 (37%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Frame = +1
Query: 178 PSGPGQ*CSRFYVQELEAALLREQGGGHQTSAESWGTGRAVARIPRV-RGGGTH 336
P PGQ E A REQGGG +G GR A +P + R G H
Sbjct: 31 PQLPGQELRDASAARAELAAFREQGGGSVVQWTPYGLGRRAADLPLLSRDTGVH 84
>UniRef50_Q9NGR9 Cluster: Nuclear protein EAST; n=3; Drosophila
melanogaster|Rep: Nuclear protein EAST - Drosophila
melanogaster (Fruit fly)
Length = 2362
Score = 32.7 bits (71), Expect = 6.5
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = +1
Query: 247 QGGGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGG 378
+GGG T ES GT + V ++ R GG SG G + GG
Sbjct: 1095 RGGGSATHVESSGTLKTVIKLNRSSNGGVSGSGGLPTGTVIHGG 1138
>UniRef50_Q5TV94 Cluster: ENSANGP00000029021; n=2; cellular
organisms|Rep: ENSANGP00000029021 - Anopheles gambiae
str. PEST
Length = 1711
Score = 32.7 bits (71), Expect = 6.5
Identities = 26/83 (31%), Positives = 36/83 (43%), Gaps = 1/83 (1%)
Frame = +1
Query: 79 SIGSPTFSVGVFREE*DGAGCSQAPPVRVQGAHPSGPGQ*CSRFYVQELEAALLREQGGG 258
S GS SVG E AG S ++ QG+ S G + + +++L G G
Sbjct: 1489 SYGSQNISVGADDESQSTAGGSPNSTLKQQGSVESTSGLASGYVHKANVPSSMLSGGGSG 1548
Query: 259 HQTSAESWGTGRAV-ARIPRVRG 324
+ S G G A +RIP V G
Sbjct: 1549 FSAALASGGNGVAAGSRIPGVPG 1571
>UniRef50_O46048 Cluster: EG:133E12.4 protein; n=1; Drosophila
melanogaster|Rep: EG:133E12.4 protein - Drosophila
melanogaster (Fruit fly)
Length = 2342
Score = 32.7 bits (71), Expect = 6.5
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = +1
Query: 247 QGGGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGG 378
+GGG T ES GT + V ++ R GG SG G + GG
Sbjct: 1042 RGGGSATHVESSGTLKTVIKLNRSSNGGVSGSGGLPTGTVIHGG 1085
>UniRef50_UPI00015B62E9 Cluster: PREDICTED: similar to Single
minded; n=1; Nasonia vitripennis|Rep: PREDICTED: similar
to Single minded - Nasonia vitripennis
Length = 674
Score = 32.3 bits (70), Expect = 8.6
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = -1
Query: 376 HHDTCYRRHPDRTYEYHHHXHAEFGRQHVQYPM 278
HH+ Y + +HHH H + G +H+ P+
Sbjct: 622 HHEQAYPGMHENARHHHHHLHVDGGVEHLDIPL 654
>UniRef50_UPI0000DB70FB Cluster: PREDICTED: similar to achintya
CG8819-PA, isoform A; n=2; Endopterygota|Rep: PREDICTED:
similar to achintya CG8819-PA, isoform A - Apis
mellifera
Length = 447
Score = 32.3 bits (70), Expect = 8.6
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -1
Query: 361 YRRHPDRTYEYHHHXHAEFGRQHVQY 284
YRRH + YHHH H R H +Y
Sbjct: 53 YRRHYRNDHHYHHHHHHYHHRHHHRY 78
>UniRef50_Q2R8P4 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 162
Score = 32.3 bits (70), Expect = 8.6
Identities = 22/54 (40%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = +1
Query: 223 LEAALL--REQGGGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGG 378
LEA L+ R GGG + E+ G GRAVA + R H +G GA GG
Sbjct: 90 LEAVLVDRRMAGGGDDGAVETGGGGRAVAALARCWRRRWHGAGGGAGAVEAGGG 143
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 540,998,752
Number of Sequences: 1657284
Number of extensions: 10624965
Number of successful extensions: 32874
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 30033
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32301
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 40658285374
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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