Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021334
         (463 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000D56AA0 Cluster: PREDICTED: similar to CG7523-PA;...    37   0.19 
UniRef50_A1AK54 Cluster: YD repeat protein precursor; n=1; Pelob...    34   1.7  
UniRef50_A0C8R4 Cluster: Chromosome undetermined scaffold_159, w...    33   4.0  
UniRef50_UPI0000DB6E62 Cluster: PREDICTED: similar to dumpy CG33...    32   5.3  
UniRef50_Q4N3J4 Cluster: Putative uncharacterized protein; n=1; ...    32   5.3  
UniRef50_Q9VGH9 Cluster: CG6939-PA, isoform A; n=2; Drosophila m...    32   7.0  
UniRef50_Q7KSP6 Cluster: CG6939-PB, isoform B; n=5; Diptera|Rep:...    32   7.0  
UniRef50_A7SFQ2 Cluster: Predicted protein; n=1; Nematostella ve...    32   7.0  

>UniRef50_UPI0000D56AA0 Cluster: PREDICTED: similar to CG7523-PA;
           n=1; Tribolium castaneum|Rep: PREDICTED: similar to
           CG7523-PA - Tribolium castaneum
          Length = 474

 Score = 37.1 bits (82), Expect = 0.19
 Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = +1

Query: 259 FPLPCRKHSECRVM-SKQHVCCNGFCTKGIKATAP 360
           F +PC+   EC  + +K  +CCN  C KG+ A +P
Sbjct: 288 FSIPCKTAKECTQLGNKNMLCCNNRCLKGVPAPSP 322


>UniRef50_A1AK54 Cluster: YD repeat protein precursor; n=1; Pelobacter
            propionicus DSM 2379|Rep: YD repeat protein precursor -
            Pelobacter propionicus (strain DSM 2379)
          Length = 1352

 Score = 33.9 bits (74), Expect = 1.7
 Identities = 19/58 (32%), Positives = 25/58 (43%)
 Frame = +1

Query: 205  GTICGVPCSAYQQWMAGLFPLPCRKHSECRVMSKQHVCCNGFCTKGIKATAPLQSTTP 378
            G ICG   +    W+  + P  CRKH EC    K    C G+  K I  +   +S  P
Sbjct: 1271 GKICGAEGTVEATWIPDITPEACRKHDEC--YDKCAKKCAGYDCKKICDSKLFRSNPP 1326


>UniRef50_A0C8R4 Cluster: Chromosome undetermined scaffold_159,
           whole genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_159,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 659

 Score = 32.7 bits (71), Expect = 4.0
 Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
 Frame = -3

Query: 359 GAVAFIPLVQKPLQQTCCLLITRHSECFLQGSGNRP-AIHCW 237
           G +    ++QK +    CLL + +S  F+ G GN   +I CW
Sbjct: 383 GRLTLGSILQKHIDDVSCLLFSNYSNSFISGCGNEDGSIVCW 424


>UniRef50_UPI0000DB6E62 Cluster: PREDICTED: similar to dumpy
           CG33196-PB; n=1; Apis mellifera|Rep: PREDICTED: similar
           to dumpy CG33196-PB - Apis mellifera
          Length = 3332

 Score = 32.3 bits (70), Expect = 5.3
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +1

Query: 262 PLPCRKHSECRVMSKQHVCCNGFCTKGIKATAP 360
           P PC  +SECR+++ Q VC    C KG   + P
Sbjct: 20  PTPCGPNSECRIVNGQAVCS---CIKGFLGSPP 49


>UniRef50_Q4N3J4 Cluster: Putative uncharacterized protein; n=1;
            Theileria parva|Rep: Putative uncharacterized protein -
            Theileria parva
          Length = 3588

 Score = 32.3 bits (70), Expect = 5.3
 Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
 Frame = -1

Query: 391  SGSERGLCFVMVPWLLY--PWYKNRCSKHVACSSRDILSAFY 272
            + + R  C+ MVP LL+   W  + C++ ++C  RDI  A Y
Sbjct: 1183 TSAHRSCCYPMVPNLLFIESWKCDYCTQCISCGYRDITCADY 1224


>UniRef50_Q9VGH9 Cluster: CG6939-PA, isoform A; n=2; Drosophila
            melanogaster|Rep: CG6939-PA, isoform A - Drosophila
            melanogaster (Fruit fly)
          Length = 1993

 Score = 31.9 bits (69), Expect = 7.0
 Identities = 18/45 (40%), Positives = 20/45 (44%), Gaps = 5/45 (11%)
 Frame = -3

Query: 341  PLVQKPLQQTCCLL-----ITRHSECFLQGSGNRPAIHCWYALQG 222
            P VQKP  QT CLL     +T H  CFL   G      C    +G
Sbjct: 917  PHVQKPKIQTPCLLPGEDLVTDHLRCFLMPDGREDETQCLIPAEG 961


>UniRef50_Q7KSP6 Cluster: CG6939-PB, isoform B; n=5; Diptera|Rep:
            CG6939-PB, isoform B - Drosophila melanogaster (Fruit
            fly)
          Length = 1973

 Score = 31.9 bits (69), Expect = 7.0
 Identities = 18/45 (40%), Positives = 20/45 (44%), Gaps = 5/45 (11%)
 Frame = -3

Query: 341  PLVQKPLQQTCCLL-----ITRHSECFLQGSGNRPAIHCWYALQG 222
            P VQKP  QT CLL     +T H  CFL   G      C    +G
Sbjct: 897  PHVQKPKIQTPCLLPGEDLVTDHLRCFLMPDGREDETQCLIPAEG 941


>UniRef50_A7SFQ2 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 290

 Score = 31.9 bits (69), Expect = 7.0
 Identities = 18/58 (31%), Positives = 26/58 (44%)
 Frame = -3

Query: 368 LCNGAVAFIPLVQKPLQQTCCLLITRHSECFLQGSGNRPAIHCWYALQGTPQIVPVRY 195
           L NG    + +   P   TC +LI R   C     GN   I CW+ L+G    + +R+
Sbjct: 172 LVNGEEVLVEIKACP---TCQVLIQRDEGCAQMMCGNCKHIFCWHCLKGLDSDILLRH 226


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 436,803,819
Number of Sequences: 1657284
Number of extensions: 8285707
Number of successful extensions: 21822
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 21194
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21814
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 24771286585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)