Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021333
         (561 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00015B4FED Cluster: PREDICTED: similar to conserved ...    54   3e-06
UniRef50_UPI0000DB725D Cluster: PREDICTED: similar to CG15270-PA...    52   1e-05
UniRef50_Q9V416 Cluster: CG15270-PA, isoform A; n=6; Diptera|Rep...    51   2e-05
UniRef50_P60315 Cluster: DNA-directed RNA polymerase subunit alp...    35   1.5  
UniRef50_UPI0000F2DCD8 Cluster: PREDICTED: similar to paired-typ...    34   2.0  
UniRef50_Q832P7 Cluster: Conserved domain protein; n=1; Enteroco...    34   2.6  
UniRef50_A6NJT0 Cluster: Uncharacterized protein ENSP00000314480...    34   2.6  
UniRef50_UPI0000E473BE Cluster: PREDICTED: similar to KIAA1623 p...    32   8.0  
UniRef50_Q9C8B9 Cluster: Putative uncharacterized protein F10O5....    32   8.0  
UniRef50_Q5A519 Cluster: Protein CGI121; n=1; Candida albicans|R...    32   8.0  

>UniRef50_UPI00015B4FED Cluster: PREDICTED: similar to conserved
           hypothetical protein; n=1; Nasonia vitripennis|Rep:
           PREDICTED: similar to conserved hypothetical protein -
           Nasonia vitripennis
          Length = 1152

 Score = 53.6 bits (123), Expect = 3e-06
 Identities = 26/49 (53%), Positives = 33/49 (67%)
 Frame = +1

Query: 367 AKDKLDSAGRELRRRLPMAGQLGAHLMHPRRLLLHSTPTQQTDVVLIFP 513
           AK+ LD A R LRR++P  G    HLM PRRL +   PTQ+ DVV++FP
Sbjct: 73  AKETLDKASRLLRRKIPCTG----HLMTPRRLWIQKVPTQECDVVMMFP 117


>UniRef50_UPI0000DB725D Cluster: PREDICTED: similar to CG15270-PA,
           isoform A; n=2; Endopterygota|Rep: PREDICTED: similar to
           CG15270-PA, isoform A - Apis mellifera
          Length = 1107

 Score = 51.6 bits (118), Expect = 1e-05
 Identities = 25/49 (51%), Positives = 32/49 (65%)
 Frame = +1

Query: 367 AKDKLDSAGRELRRRLPMAGQLGAHLMHPRRLLLHSTPTQQTDVVLIFP 513
           AK+  D A R LRR++P  G    HLM PRRL +   PTQ+ DVV++FP
Sbjct: 58  AKETFDKASRLLRRKIPCTG----HLMTPRRLWIQKVPTQECDVVVMFP 102


>UniRef50_Q9V416 Cluster: CG15270-PA, isoform A; n=6; Diptera|Rep:
           CG15270-PA, isoform A - Drosophila melanogaster (Fruit
           fly)
          Length = 1338

 Score = 50.8 bits (116), Expect = 2e-05
 Identities = 33/80 (41%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
 Frame = +1

Query: 280 DGGTGN-TDKEEHESSTNSTPQEHKSFAEFAKDKLDSAGRELRRRLPMAGQLGAHLMHPR 456
           DGG  + TD    ES+     +        AK+ +++A R+LRR++P AG    HLM PR
Sbjct: 45  DGGEDDFTDDNNFESNLR---RRKGKIISCAKETIENASRQLRRKVPYAG----HLMTPR 97

Query: 457 RLLLHSTPTQQTDVVLIFPK 516
           RL L+  PT Q DVV+ FP+
Sbjct: 98  RLWLNKIPT-QCDVVIEFPE 116


>UniRef50_P60315 Cluster: DNA-directed RNA polymerase subunit alpha,
           chloroplast precursor; n=9; Embryophyta|Rep:
           DNA-directed RNA polymerase subunit alpha, chloroplast
           precursor - Physcomitrella patens (Moss)
          Length = 450

 Score = 34.7 bits (76), Expect = 1.5
 Identities = 16/41 (39%), Positives = 24/41 (58%)
 Frame = -1

Query: 261 TRDAPCDNDANPCSKAFRPSNSYIIAKNKTFEFNLVTALNY 139
           T DAP D D    +KA+R  NS  I +++T + N  +AL +
Sbjct: 87  TADAPVDEDVLAWTKAYRAENSTAITRDETLKSNAQSALQW 127


>UniRef50_UPI0000F2DCD8 Cluster: PREDICTED: similar to paired-type
           homeodomain transcription factor; n=1; Monodelphis
           domestica|Rep: PREDICTED: similar to paired-type
           homeodomain transcription factor - Monodelphis domestica
          Length = 630

 Score = 34.3 bits (75), Expect = 2.0
 Identities = 19/70 (27%), Positives = 33/70 (47%)
 Frame = +1

Query: 286 GTGNTDKEEHESSTNSTPQEHKSFAEFAKDKLDSAGRELRRRLPMAGQLGAHLMHPRRLL 465
           G G      H ++ +  P + +  A    +K++   R+  ++L +  Q   HL  P  L 
Sbjct: 220 GPGRPAHNSHPTTCSGEPMDPEEIARKELEKMEKKKRKHEKKL-LKSQ-SRHLHSPSSLS 277

Query: 466 LHSTPTQQTD 495
           LHSTP+  +D
Sbjct: 278 LHSTPSSDSD 287


>UniRef50_Q832P7 Cluster: Conserved domain protein; n=1;
           Enterococcus faecalis|Rep: Conserved domain protein -
           Enterococcus faecalis (Streptococcus faecalis)
          Length = 893

 Score = 33.9 bits (74), Expect = 2.6
 Identities = 16/38 (42%), Positives = 21/38 (55%)
 Frame = +1

Query: 250 SVASFTMDGEDGGTGNTDKEEHESSTNSTPQEHKSFAE 363
           SV        D  T +T +E  +SSTNST +EH S +E
Sbjct: 56  SVTEENTSERDSSTSSTKEESLDSSTNSTTEEHSSVSE 93


>UniRef50_A6NJT0 Cluster: Uncharacterized protein ENSP00000314480;
           n=19; Euteleostomi|Rep: Uncharacterized protein
           ENSP00000314480 - Homo sapiens (Human)
          Length = 531

 Score = 33.9 bits (74), Expect = 2.6
 Identities = 19/70 (27%), Positives = 33/70 (47%)
 Frame = +1

Query: 286 GTGNTDKEEHESSTNSTPQEHKSFAEFAKDKLDSAGRELRRRLPMAGQLGAHLMHPRRLL 465
           G G      H ++ +  P + +  A    +K++   R+  ++L +  Q G HL  P  L 
Sbjct: 169 GPGRPAHNSHPTTCSGEPMDPEEIARKELEKMEKKKRKHEKKL-LKSQ-GRHLHSPGGLS 226

Query: 466 LHSTPTQQTD 495
           LHS P+  +D
Sbjct: 227 LHSAPSSDSD 236


>UniRef50_UPI0000E473BE Cluster: PREDICTED: similar to KIAA1623
           protein; n=1; Strongylocentrotus purpuratus|Rep:
           PREDICTED: similar to KIAA1623 protein -
           Strongylocentrotus purpuratus
          Length = 432

 Score = 32.3 bits (70), Expect = 8.0
 Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = +1

Query: 445 MHPRRLLLHSTPTQQTDVVLIFP-KVYQTVCFMVLQKLR 558
           MH  +L L + PT   +VV+IFP K    V   VL KL+
Sbjct: 27  MHANKLWLQTVPTTDCEVVVIFPTKTDDAVIMWVLAKLK 65


>UniRef50_Q9C8B9 Cluster: Putative uncharacterized protein F10O5.2;
           n=1; Arabidopsis thaliana|Rep: Putative uncharacterized
           protein F10O5.2 - Arabidopsis thaliana (Mouse-ear cress)
          Length = 302

 Score = 32.3 bits (70), Expect = 8.0
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = +1

Query: 268 MDGEDGGTGNTDKEEHESSTNSTPQEHKSF 357
           MD  + G+  +  ++HESS+   PQ+H SF
Sbjct: 1   MDSCNSGSLQSSSDDHESSSTGAPQDHSSF 30


>UniRef50_Q5A519 Cluster: Protein CGI121; n=1; Candida albicans|Rep:
           Protein CGI121 - Candida albicans (Yeast)
          Length = 203

 Score = 32.3 bits (70), Expect = 8.0
 Identities = 23/65 (35%), Positives = 29/65 (44%)
 Frame = -1

Query: 306 FIGVSGASVLPIHGETRDAPCDNDANPCSKAFRPSNSYIIAKNKTFEFNLVTALNYTRNS 127
           FI VS  ++  I      A  DND N     F  +  YII+K   F+    + LNYT   
Sbjct: 21  FINVSSENITTIKSNLISAT-DNDHNKYDYCFL-NTKYIISKEHLFQSIYKSLLNYTSKL 78

Query: 126 YLKTR 112
            L TR
Sbjct: 79  GLSTR 83


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 502,571,644
Number of Sequences: 1657284
Number of extensions: 9430692
Number of successful extensions: 28681
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 27680
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28658
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 37488397230
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)