Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021331
         (490 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    27   0.12 
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    24   0.64 
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       23   2.0  
Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor ...    22   2.6  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    21   6.0  
AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.           21   6.0  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   6.0  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   7.9  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    21   7.9  

>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 26.6 bits (56), Expect = 0.12
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = +2

Query: 377 GRILDEPLLSLENPGNSHASPLPAPVSENLIAPKP 481
           GR+ DE L  LENP     +P P P   +   P+P
Sbjct: 237 GRLTDEQLKELENP----PTPKPRPTKVSRRKPRP 267


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 24.2 bits (50), Expect = 0.64
 Identities = 12/51 (23%), Positives = 23/51 (45%)
 Frame = +2

Query: 128 PLRTGIAPAEMLNELLGRTTKQDDNGDEANGGVIAHRVLRDIHRAAIKSYC 280
           P +    P E       +TTK  ++G+E++G      ++RD    ++   C
Sbjct: 411 PTQASEQPTESSTTQKPQTTKTPESGNESDGVCTKEGIVRDPSDCSVYYTC 461


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +2

Query: 434 SPLPAPVSENLIAPKPEPD 490
           +PL  P SE L++PK E +
Sbjct: 104 NPLTPPNSEPLVSPKSEKE 122


>Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor
           5-like protein protein.
          Length = 162

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 11/35 (31%), Positives = 14/35 (40%)
 Frame = +2

Query: 104 LRGPPTLRPLRTGIAPAEMLNELLGRTTKQDDNGD 208
           L+ PP L P   G +  E       +    D NGD
Sbjct: 56  LKNPPNLNPAVQGSSLTEGKRSKRSKRPNGDTNGD 90


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +3

Query: 366 ARLTAGSWTSPSSRSKIPGTHTRLR 440
           + L AG  +S SSRS  P T ++ R
Sbjct: 235 SELLAGLQSSGSSRSHQPATKSKPR 259


>AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.
          Length = 257

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 11/33 (33%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = +2

Query: 392 EPLLSL-ENPGNSHASPLPAPVSENLIAPKPEP 487
           E LL+L E+  +S  S +P+P + + ++  P P
Sbjct: 115 EDLLALDESTVSSSTSSIPSPSTTDDLSTNPTP 147


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +2

Query: 104 LRGPPTLRPLRTGIAP 151
           LRG PTL P+   + P
Sbjct: 112 LRGVPTLSPVGVALPP 127


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = -1

Query: 382 PAVSRASRFVPVI 344
           PAVS+A +F+P +
Sbjct: 385 PAVSKARQFLPAL 397


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = -1

Query: 382 PAVSRASRFVPVI 344
           PAVS+A +F+P +
Sbjct: 210 PAVSKARQFLPAL 222


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,167
Number of Sequences: 336
Number of extensions: 1368
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11420693
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)