Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021330
         (684 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    26   0.25 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   5.4  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    22   5.4  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    22   5.4  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    22   5.4  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    21   7.1  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    21   7.1  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    21   9.4  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    21   9.4  

>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 26.2 bits (55), Expect = 0.25
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = +3

Query: 48  TTRRKHRSAPYRLHRPHLPSAHVSEPP 128
           TT + +R++PY + RP   SA +S PP
Sbjct: 258 TTLKNNRASPYPMQRP--KSASLSPPP 282


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +3

Query: 99  LPSAHVSEPPTEPQGT 146
           LP      PPT+P GT
Sbjct: 544 LPMQQSQNPPTKPYGT 559


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 12/41 (29%), Positives = 17/41 (41%)
 Frame = -1

Query: 126 GARTRERKANAAGVVCKARYDVFSSSSCSVNR*GQAVRPAR 4
           G R R R  N+   VC A+  +       +   G+ V P R
Sbjct: 341 GRRYRFRMINSFASVCPAQLTIQGHDLTLIATDGEPVHPVR 381


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 12/41 (29%), Positives = 17/41 (41%)
 Frame = -1

Query: 126 GARTRERKANAAGVVCKARYDVFSSSSCSVNR*GQAVRPAR 4
           G R R R  N+   VC A+  +       +   G+ V P R
Sbjct: 341 GRRYRFRMINSFASVCPAQLTIQGHDLTLIATDGEPVHPVR 381


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -1

Query: 543 PSEESVTCLQSENQ 502
           P E   TC+Q++NQ
Sbjct: 107 PCENQATCVQNKNQ 120


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 11/37 (29%), Positives = 16/37 (43%)
 Frame = +1

Query: 40  RARRRGENIVARLTDYTGRICLPLTCPSPRLSLRELT 150
           RARR G  +  R+       C+P      RL   E++
Sbjct: 337 RARRTGRKVSPRVNTIKHTSCIPTPNGDSRLPPLEIS 373


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 11/37 (29%), Positives = 16/37 (43%)
 Frame = +1

Query: 40  RARRRGENIVARLTDYTGRICLPLTCPSPRLSLRELT 150
           RARR G  +  R+       C+P      RL   E++
Sbjct: 337 RARRTGRKVSPRVNTIKHTSCIPTPNGDSRLPPLEIS 373


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +2

Query: 335 RRGVRKLQVLSLRRGLRDAVAF 400
           RRG+R     SLR GL+ A  F
Sbjct: 24  RRGLRLHDNPSLREGLKGARTF 45


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -3

Query: 283 FYATPNRSSIAASLHARQT 227
           + A P R+ +AASL   QT
Sbjct: 145 YLALPERAELAASLGLTQT 163


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,012
Number of Sequences: 336
Number of extensions: 2849
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17906060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)