Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021330
(684 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB090819-1|BAC57913.1| 400|Anopheles gambiae gag-like protein p... 27 0.42
AF387862-1|AAL56547.1| 476|Anopheles gambiae gag polyprotein pr... 25 1.7
AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubu... 25 2.9
U50468-1|AAA93472.1| 91|Anopheles gambiae protein ( Anopheles ... 24 3.9
DQ974174-1|ABJ52814.1| 391|Anopheles gambiae serpin 18 protein. 24 5.1
AY943928-1|AAX49501.1| 753|Anopheles gambiae laccase-2 isoform ... 23 6.8
EF519477-1|ABP73563.1| 165|Anopheles gambiae CTLMA2 protein. 23 9.0
EF519473-1|ABP73555.1| 165|Anopheles gambiae CTLMA2 protein. 23 9.0
EF519472-1|ABP73553.1| 165|Anopheles gambiae CTLMA2 protein. 23 9.0
EF519465-1|ABP73539.1| 165|Anopheles gambiae CTLMA2 protein. 23 9.0
EF519458-1|ABP73525.1| 165|Anopheles gambiae CTLMA2 protein. 23 9.0
EF519457-1|ABP73523.1| 165|Anopheles gambiae CTLMA2 protein. 23 9.0
EF519456-1|ABP73521.1| 165|Anopheles gambiae CTLMA2 protein. 23 9.0
EF519453-1|ABP73515.1| 163|Anopheles gambiae CTLMA2 protein. 23 9.0
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript... 23 9.0
>AB090819-1|BAC57913.1| 400|Anopheles gambiae gag-like protein
protein.
Length = 400
Score = 27.5 bits (58), Expect = 0.42
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +1
Query: 133 SLRELTSRGCIQSCWRLYLKDYRCETGAELHKFVARGGTQLSKI 264
SLRE T + CW+L K + C TG + K + G + KI
Sbjct: 320 SLREATVQVKCFKCWKLGHKGFEC-TGQDRSKLCIKCGQEGHKI 362
>AF387862-1|AAL56547.1| 476|Anopheles gambiae gag polyprotein
protein.
Length = 476
Score = 25.4 bits (53), Expect = 1.7
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = -1
Query: 654 RRRFLSPHVINSRPVSVML 598
RR FLS + SRPVSV+L
Sbjct: 427 RREFLSKNATFSRPVSVVL 445
>AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubule
binding protein protein.
Length = 838
Score = 24.6 bits (51), Expect = 2.9
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = +3
Query: 72 APYRLHRPHLPSAHVSEPPTEPQGTHISRLYPE 170
AP P +PS+ V+ PP P +R PE
Sbjct: 85 APQPSLAPVVPSSVVTAPPARPSQPPTTRFAPE 117
>U50468-1|AAA93472.1| 91|Anopheles gambiae protein ( Anopheles
gambiae putativetubulin alpha chain mRNA, complete cds.
).
Length = 91
Score = 24.2 bits (50), Expect = 3.9
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +1
Query: 49 RRGENIVARLTDYTGRICLPLTCPSPRLSL 138
RR E ++ R T + R+ TCP P S+
Sbjct: 40 RRSEAVMTRSTPSSPRLAQASTCPVPCSSI 69
>DQ974174-1|ABJ52814.1| 391|Anopheles gambiae serpin 18 protein.
Length = 391
Score = 23.8 bits (49), Expect = 5.1
Identities = 13/52 (25%), Positives = 21/52 (40%)
Frame = +1
Query: 529 GLFTRKNRSIVKELGRTRARRLLQHYGYRSAVNNMGT*ESPSIKSAVVWHVN 684
G+F + + + GRTR +QH + + G P S +H N
Sbjct: 309 GVFEIDDLHVFHDSGRTRLNGFIQHCYLAVSESGSGIPAPPDTPSEFEFHAN 360
>AY943928-1|AAX49501.1| 753|Anopheles gambiae laccase-2 isoform A
protein.
Length = 753
Score = 23.4 bits (48), Expect = 6.8
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = -1
Query: 126 GARTRERKANAAGVVCKARYDVFSSSSCSVNR*GQAVRPAR 4
G R R R NA VC A+ + + + G+ V PA+
Sbjct: 383 GRRYRFRMINAFASVCPAQVTIEGHALTVIATDGEPVHPAQ 423
>EF519477-1|ABP73563.1| 165|Anopheles gambiae CTLMA2 protein.
Length = 165
Score = 23.0 bits (47), Expect = 9.0
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = -1
Query: 246 PSTRDKLVQLGPCLAP 199
P T D ++Q PCL P
Sbjct: 13 PKTVDDILQQNPCLCP 28
>EF519473-1|ABP73555.1| 165|Anopheles gambiae CTLMA2 protein.
Length = 165
Score = 23.0 bits (47), Expect = 9.0
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = -1
Query: 246 PSTRDKLVQLGPCLAP 199
P T D ++Q PCL P
Sbjct: 13 PKTVDDILQQNPCLCP 28
>EF519472-1|ABP73553.1| 165|Anopheles gambiae CTLMA2 protein.
Length = 165
Score = 23.0 bits (47), Expect = 9.0
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = -1
Query: 246 PSTRDKLVQLGPCLAP 199
P T D ++Q PCL P
Sbjct: 13 PKTVDDILQQNPCLCP 28
>EF519465-1|ABP73539.1| 165|Anopheles gambiae CTLMA2 protein.
Length = 165
Score = 23.0 bits (47), Expect = 9.0
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = -1
Query: 246 PSTRDKLVQLGPCLAP 199
P T D ++Q PCL P
Sbjct: 13 PKTVDDILQQNPCLCP 28
>EF519458-1|ABP73525.1| 165|Anopheles gambiae CTLMA2 protein.
Length = 165
Score = 23.0 bits (47), Expect = 9.0
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = -1
Query: 246 PSTRDKLVQLGPCLAP 199
P T D ++Q PCL P
Sbjct: 13 PKTVDDILQQNPCLCP 28
>EF519457-1|ABP73523.1| 165|Anopheles gambiae CTLMA2 protein.
Length = 165
Score = 23.0 bits (47), Expect = 9.0
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = -1
Query: 246 PSTRDKLVQLGPCLAP 199
P T D ++Q PCL P
Sbjct: 13 PKTVDDILQQNPCLCP 28
>EF519456-1|ABP73521.1| 165|Anopheles gambiae CTLMA2 protein.
Length = 165
Score = 23.0 bits (47), Expect = 9.0
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = -1
Query: 246 PSTRDKLVQLGPCLAP 199
P T D ++Q PCL P
Sbjct: 13 PKTVDDILQQNPCLCP 28
>EF519453-1|ABP73515.1| 163|Anopheles gambiae CTLMA2 protein.
Length = 163
Score = 23.0 bits (47), Expect = 9.0
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = -1
Query: 246 PSTRDKLVQLGPCLAP 199
P T D ++Q PCL P
Sbjct: 11 PKTVDDILQQNPCLCP 26
>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
protein.
Length = 1009
Score = 23.0 bits (47), Expect = 9.0
Identities = 12/45 (26%), Positives = 18/45 (40%)
Frame = +3
Query: 6 WRDERLGLTDLPSTTTRRKHRSAPYRLHRPHLPSAHVSEPPTEPQ 140
W R G D + H Y+LHR L + + + EP+
Sbjct: 877 WISRRFGGVDFFLSQFLSSHGFYAYQLHRMQLTGSPLCDACEEPE 921
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 674,401
Number of Sequences: 2352
Number of extensions: 13275
Number of successful extensions: 30
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68995575
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -