Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021330
(684 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U29613-3|AAC47062.2| 483|Caenorhabditis elegans Hypothetical pr... 41 0.001
L14745-2|AAA27922.2| 461|Caenorhabditis elegans Hypothetical pr... 40 0.001
L14745-1|AAM15540.1| 466|Caenorhabditis elegans Hypothetical pr... 40 0.001
AC024809-3|AAF59541.3| 455|Caenorhabditis elegans Hypothetical ... 33 0.19
Z48809-8|CAA88748.2| 535|Caenorhabditis elegans Hypothetical pr... 32 0.33
Z48795-8|CAA88732.2| 535|Caenorhabditis elegans Hypothetical pr... 32 0.33
U13875-10|AAA21159.1| 332|Caenorhabditis elegans F-box synaptic... 31 0.58
Z22179-17|CAA80171.2| 691|Caenorhabditis elegans Hypothetical p... 30 1.8
Z22173-3|CAA80127.2| 691|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z71181-9|CAD44140.1| 960|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z71178-18|CAH04640.1| 671|Caenorhabditis elegans Hypothetical p... 29 2.3
Z71178-17|CAD44089.1| 898|Caenorhabditis elegans Hypothetical p... 29 2.3
Z71178-15|CAD44087.1| 960|Caenorhabditis elegans Hypothetical p... 29 2.3
Z71178-14|CAA94886.3| 894|Caenorhabditis elegans Hypothetical p... 29 2.3
Z46242-7|CAA86336.1| 1549|Caenorhabditis elegans Hypothetical pr... 29 2.3
AL021478-4|CAJ26240.1| 671|Caenorhabditis elegans Hypothetical ... 29 2.3
AL021478-3|CAF32233.1| 898|Caenorhabditis elegans Hypothetical ... 29 2.3
AL021478-1|CAC35857.2| 894|Caenorhabditis elegans Hypothetical ... 29 2.3
Z72507-1|CAA96633.2| 172|Caenorhabditis elegans Hypothetical pr... 28 7.1
AF040643-6|AAT81200.1| 249|Caenorhabditis elegans Hypothetical ... 28 7.1
AC090999-7|AAK26142.1| 438|Caenorhabditis elegans Hypothetical ... 27 9.4
>U29613-3|AAC47062.2| 483|Caenorhabditis elegans Hypothetical
protein K02A6.3a protein.
Length = 483
Score = 40.7 bits (91), Expect = 0.001
Identities = 16/26 (61%), Positives = 22/26 (84%)
Frame = +3
Query: 168 ELLALIFERLPVRDRGRAAQVCRAWR 245
ELL IF+RLPV+++GR +QVCR W+
Sbjct: 13 ELLEDIFQRLPVKNKGRCSQVCRQWQ 38
>L14745-2|AAA27922.2| 461|Caenorhabditis elegans Hypothetical
protein C02F5.7a protein.
Length = 461
Score = 40.3 bits (90), Expect = 0.001
Identities = 21/60 (35%), Positives = 30/60 (50%)
Frame = +2
Query: 458 TSQRVCCRAAGIEKT*FSLCKQVTDSSLGRIAQSLKNLEELELGGCCNITDTGLLLITWG 637
T Q + A +E S C Q++D SL + Q NL+ LEL GC + D G + + G
Sbjct: 270 TVQNIANGATALEYLCMSNCNQISDRSLVSLGQHSHNLKVLELSGCTLLGDNGFIPLARG 329
Score = 32.3 bits (70), Expect = 0.33
Identities = 16/46 (34%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = +3
Query: 126 PTEPQGTHISRLYP-ELLALIFERLPVRDRGRAAQVCRAWRDAAIE 260
P + + I+R+ P E+L +F L + R+AQVCR+W A++
Sbjct: 48 PAQVDNSLINRVLPKEVLLKVFSFLDTKALCRSAQVCRSWSILALD 93
Score = 30.7 bits (66), Expect = 1.0
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +2
Query: 479 RAAGIEKT*FSLCKQVTDSSLGRIAQSLKNLEELELGGCCNITDTGLLLI 628
R +E CK+VTD+S + + L L L C +ITD + I
Sbjct: 147 RCPNLEHLSLYRCKRVTDASCENLGRYCHKLNYLNLENCSSITDRAMKYI 196
Score = 28.3 bits (60), Expect = 5.4
Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 2/70 (2%)
Frame = +2
Query: 407 WARIVVFEWMLQRH*RSTSQRVCCRAAG--IEKT*FSLCKQVTDSSLGRIAQSLKNLEEL 580
W R+ +F + QR ++ R G +++ C+ V DS+L NLE L
Sbjct: 97 WQRVDLFTF--QRDVKTAVVENLARRCGGFLKELSLKGCENVHDSALRTFTSRCPNLEHL 154
Query: 581 ELGGCCNITD 610
L C +TD
Sbjct: 155 SLYRCKRVTD 164
>L14745-1|AAM15540.1| 466|Caenorhabditis elegans Hypothetical
protein C02F5.7b protein.
Length = 466
Score = 40.3 bits (90), Expect = 0.001
Identities = 21/60 (35%), Positives = 30/60 (50%)
Frame = +2
Query: 458 TSQRVCCRAAGIEKT*FSLCKQVTDSSLGRIAQSLKNLEELELGGCCNITDTGLLLITWG 637
T Q + A +E S C Q++D SL + Q NL+ LEL GC + D G + + G
Sbjct: 270 TVQNIANGATALEYLCMSNCNQISDRSLVSLGQHSHNLKVLELSGCTLLGDNGFIPLARG 329
Score = 32.3 bits (70), Expect = 0.33
Identities = 16/46 (34%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = +3
Query: 126 PTEPQGTHISRLYP-ELLALIFERLPVRDRGRAAQVCRAWRDAAIE 260
P + + I+R+ P E+L +F L + R+AQVCR+W A++
Sbjct: 48 PAQVDNSLINRVLPKEVLLKVFSFLDTKALCRSAQVCRSWSILALD 93
Score = 30.7 bits (66), Expect = 1.0
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +2
Query: 479 RAAGIEKT*FSLCKQVTDSSLGRIAQSLKNLEELELGGCCNITDTGLLLI 628
R +E CK+VTD+S + + L L L C +ITD + I
Sbjct: 147 RCPNLEHLSLYRCKRVTDASCENLGRYCHKLNYLNLENCSSITDRAMKYI 196
Score = 28.3 bits (60), Expect = 5.4
Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 2/70 (2%)
Frame = +2
Query: 407 WARIVVFEWMLQRH*RSTSQRVCCRAAG--IEKT*FSLCKQVTDSSLGRIAQSLKNLEEL 580
W R+ +F + QR ++ R G +++ C+ V DS+L NLE L
Sbjct: 97 WQRVDLFTF--QRDVKTAVVENLARRCGGFLKELSLKGCENVHDSALRTFTSRCPNLEHL 154
Query: 581 ELGGCCNITD 610
L C +TD
Sbjct: 155 SLYRCKRVTD 164
>AC024809-3|AAF59541.3| 455|Caenorhabditis elegans Hypothetical
protein Y53G8AR.8 protein.
Length = 455
Score = 33.1 bits (72), Expect = 0.19
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +2
Query: 524 VTDSSLGRIAQSLKNLEELELGGCCNITDTGLL 622
V D +GRI L NLE L+L GC I+ GL+
Sbjct: 212 VDDWCIGRIGGLLPNLEMLDLSGCHRISSKGLM 244
>Z48809-8|CAA88748.2| 535|Caenorhabditis elegans Hypothetical
protein T01E8.1 protein.
Length = 535
Score = 32.3 bits (70), Expect = 0.33
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = +2
Query: 461 SQRVCCRAAG--IEKT*FSLCKQVTDSSLGRIAQSLKNLEELELGGCCNITDTGLLLITW 634
S VC + G I F L ++TD L ++ + K +E++ L C N+T+ G +T
Sbjct: 49 STLVCSKYFGCNIPSLTFYLSAELTDEMLNQLTTNNKYVEKITLVDCPNVTNLGAQAVTT 108
Query: 635 G 637
G
Sbjct: 109 G 109
>Z48795-8|CAA88732.2| 535|Caenorhabditis elegans Hypothetical
protein T01E8.1 protein.
Length = 535
Score = 32.3 bits (70), Expect = 0.33
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = +2
Query: 461 SQRVCCRAAG--IEKT*FSLCKQVTDSSLGRIAQSLKNLEELELGGCCNITDTGLLLITW 634
S VC + G I F L ++TD L ++ + K +E++ L C N+T+ G +T
Sbjct: 49 STLVCSKYFGCNIPSLTFYLSAELTDEMLNQLTTNNKYVEKITLVDCPNVTNLGAQAVTT 108
Query: 635 G 637
G
Sbjct: 109 G 109
>U13875-10|AAA21159.1| 332|Caenorhabditis elegans F-box synaptic
protein protein 1 protein.
Length = 332
Score = 31.5 bits (68), Expect = 0.58
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = +3
Query: 93 PHLPSAHVSEPPTEPQGTHISRLYPELLALIFERLPVRDRGRAAQVCRAWRDA-AIED 263
PH P P+ SRL ++L IF+ LP++D A C +W +A ++ED
Sbjct: 64 PHSIPPRRRRSPRRPE-VSASRLPLKVLNQIFQYLPLKDLRSAMLTCHSWNNALSMED 120
>Z22179-17|CAA80171.2| 691|Caenorhabditis elegans Hypothetical
protein F58A4.11 protein.
Length = 691
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = +3
Query: 33 DLPSTTTRRKHRSAPYRLHRPHLPSAHVSEPPTEPQGTHISRLYPELLALIFE 191
D+ S TT + S PY H P+ +E PT G + PE +A FE
Sbjct: 29 DVSSFTTTSESTSPPYSSSEHHSPTDQRTETPTSDSGN--ASFSPENVATSFE 79
>Z22173-3|CAA80127.2| 691|Caenorhabditis elegans Hypothetical
protein F58A4.11 protein.
Length = 691
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = +3
Query: 33 DLPSTTTRRKHRSAPYRLHRPHLPSAHVSEPPTEPQGTHISRLYPELLALIFE 191
D+ S TT + S PY H P+ +E PT G + PE +A FE
Sbjct: 29 DVSSFTTTSESTSPPYSSSEHHSPTDQRTETPTSDSGN--ASFSPENVATSFE 79
>Z71181-9|CAD44140.1| 960|Caenorhabditis elegans Hypothetical
protein B0024.14b protein.
Length = 960
Score = 29.5 bits (63), Expect = 2.3
Identities = 25/73 (34%), Positives = 29/73 (39%), Gaps = 1/73 (1%)
Frame = +1
Query: 100 CLPLTCPS-PRLSLRELTSRGCIQSCWRLYLKDYRCETGAELHKFVARGGTQLSKICLAW 276
CLP P+ PR REL C + C YLKD T + K Q K CL
Sbjct: 415 CLPDEVPTNPRC--RELNDENCEKQCAHGYLKDEDGCTVCKCSKCPPL--HQCHKHCLYG 470
Query: 277 RRSRSASTETCSC 315
+ SA C C
Sbjct: 471 FETNSAGCSLCKC 483
>Z71178-18|CAH04640.1| 671|Caenorhabditis elegans Hypothetical
protein B0024.14e protein.
Length = 671
Score = 29.5 bits (63), Expect = 2.3
Identities = 25/73 (34%), Positives = 29/73 (39%), Gaps = 1/73 (1%)
Frame = +1
Query: 100 CLPLTCPS-PRLSLRELTSRGCIQSCWRLYLKDYRCETGAELHKFVARGGTQLSKICLAW 276
CLP P+ PR REL C + C YLKD T + K Q K CL
Sbjct: 349 CLPDEVPTNPRC--RELNDENCEKQCAHGYLKDEDGCTVCKCSKCPPL--HQCHKHCLYG 404
Query: 277 RRSRSASTETCSC 315
+ SA C C
Sbjct: 405 FETNSAGCSLCKC 417
>Z71178-17|CAD44089.1| 898|Caenorhabditis elegans Hypothetical
protein B0024.14d protein.
Length = 898
Score = 29.5 bits (63), Expect = 2.3
Identities = 25/73 (34%), Positives = 29/73 (39%), Gaps = 1/73 (1%)
Frame = +1
Query: 100 CLPLTCPS-PRLSLRELTSRGCIQSCWRLYLKDYRCETGAELHKFVARGGTQLSKICLAW 276
CLP P+ PR REL C + C YLKD T + K Q K CL
Sbjct: 349 CLPDEVPTNPRC--RELNDENCEKQCAHGYLKDEDGCTVCKCSKCPPL--HQCHKHCLYG 404
Query: 277 RRSRSASTETCSC 315
+ SA C C
Sbjct: 405 FETNSAGCSLCKC 417
>Z71178-15|CAD44087.1| 960|Caenorhabditis elegans Hypothetical
protein B0024.14b protein.
Length = 960
Score = 29.5 bits (63), Expect = 2.3
Identities = 25/73 (34%), Positives = 29/73 (39%), Gaps = 1/73 (1%)
Frame = +1
Query: 100 CLPLTCPS-PRLSLRELTSRGCIQSCWRLYLKDYRCETGAELHKFVARGGTQLSKICLAW 276
CLP P+ PR REL C + C YLKD T + K Q K CL
Sbjct: 415 CLPDEVPTNPRC--RELNDENCEKQCAHGYLKDEDGCTVCKCSKCPPL--HQCHKHCLYG 470
Query: 277 RRSRSASTETCSC 315
+ SA C C
Sbjct: 471 FETNSAGCSLCKC 483
>Z71178-14|CAA94886.3| 894|Caenorhabditis elegans Hypothetical
protein B0024.14a protein.
Length = 894
Score = 29.5 bits (63), Expect = 2.3
Identities = 25/73 (34%), Positives = 29/73 (39%), Gaps = 1/73 (1%)
Frame = +1
Query: 100 CLPLTCPS-PRLSLRELTSRGCIQSCWRLYLKDYRCETGAELHKFVARGGTQLSKICLAW 276
CLP P+ PR REL C + C YLKD T + K Q K CL
Sbjct: 349 CLPDEVPTNPRC--RELNDENCEKQCAHGYLKDEDGCTVCKCSKCPPL--HQCHKHCLYG 404
Query: 277 RRSRSASTETCSC 315
+ SA C C
Sbjct: 405 FETNSAGCSLCKC 417
>Z46242-7|CAA86336.1| 1549|Caenorhabditis elegans Hypothetical protein
F35G12.8 protein.
Length = 1549
Score = 29.5 bits (63), Expect = 2.3
Identities = 15/44 (34%), Positives = 28/44 (63%), Gaps = 2/44 (4%)
Frame = -1
Query: 354 NFLTPRLAK--DANSTGAGLRRCRAASTPRQTDLR*LRPSTRDK 229
N +PR A+ +A+ T +R +ASTP+++ ++ L PS++ K
Sbjct: 1494 NVRSPRKARNIEADETTPPSKRSNSASTPKRSPMKPLTPSSKKK 1537
>AL021478-4|CAJ26240.1| 671|Caenorhabditis elegans Hypothetical
protein B0024.14e protein.
Length = 671
Score = 29.5 bits (63), Expect = 2.3
Identities = 25/73 (34%), Positives = 29/73 (39%), Gaps = 1/73 (1%)
Frame = +1
Query: 100 CLPLTCPS-PRLSLRELTSRGCIQSCWRLYLKDYRCETGAELHKFVARGGTQLSKICLAW 276
CLP P+ PR REL C + C YLKD T + K Q K CL
Sbjct: 349 CLPDEVPTNPRC--RELNDENCEKQCAHGYLKDEDGCTVCKCSKCPPL--HQCHKHCLYG 404
Query: 277 RRSRSASTETCSC 315
+ SA C C
Sbjct: 405 FETNSAGCSLCKC 417
>AL021478-3|CAF32233.1| 898|Caenorhabditis elegans Hypothetical
protein B0024.14d protein.
Length = 898
Score = 29.5 bits (63), Expect = 2.3
Identities = 25/73 (34%), Positives = 29/73 (39%), Gaps = 1/73 (1%)
Frame = +1
Query: 100 CLPLTCPS-PRLSLRELTSRGCIQSCWRLYLKDYRCETGAELHKFVARGGTQLSKICLAW 276
CLP P+ PR REL C + C YLKD T + K Q K CL
Sbjct: 349 CLPDEVPTNPRC--RELNDENCEKQCAHGYLKDEDGCTVCKCSKCPPL--HQCHKHCLYG 404
Query: 277 RRSRSASTETCSC 315
+ SA C C
Sbjct: 405 FETNSAGCSLCKC 417
>AL021478-1|CAC35857.2| 894|Caenorhabditis elegans Hypothetical
protein B0024.14a protein.
Length = 894
Score = 29.5 bits (63), Expect = 2.3
Identities = 25/73 (34%), Positives = 29/73 (39%), Gaps = 1/73 (1%)
Frame = +1
Query: 100 CLPLTCPS-PRLSLRELTSRGCIQSCWRLYLKDYRCETGAELHKFVARGGTQLSKICLAW 276
CLP P+ PR REL C + C YLKD T + K Q K CL
Sbjct: 349 CLPDEVPTNPRC--RELNDENCEKQCAHGYLKDEDGCTVCKCSKCPPL--HQCHKHCLYG 404
Query: 277 RRSRSASTETCSC 315
+ SA C C
Sbjct: 405 FETNSAGCSLCKC 417
>Z72507-1|CAA96633.2| 172|Caenorhabditis elegans Hypothetical
protein F17C11.1 protein.
Length = 172
Score = 27.9 bits (59), Expect = 7.1
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +1
Query: 256 SKICLAWRRSRSASTETCSCTVCIL 330
SK W + +A+ CSCT C+L
Sbjct: 85 SKCVFKWAFATTAAATACSCTCCLL 109
>AF040643-6|AAT81200.1| 249|Caenorhabditis elegans Hypothetical
protein F14D2.13 protein.
Length = 249
Score = 27.9 bits (59), Expect = 7.1
Identities = 19/50 (38%), Positives = 24/50 (48%)
Frame = +3
Query: 102 PSAHVSEPPTEPQGTHISRLYPELLALIFERLPVRDRGRAAQVCRAWRDA 251
P SEPPT +S + E+L I E L +R +VCR RDA
Sbjct: 45 PETFFSEPPT------LSDMSMEVLGKIVENLDPFNRLSVRKVCRKLRDA 88
>AC090999-7|AAK26142.1| 438|Caenorhabditis elegans Hypothetical
protein Y82E9BR.12 protein.
Length = 438
Score = 27.5 bits (58), Expect = 9.4
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +3
Query: 135 PQGTHISRLYPELLALIFERLPVRDRGRAAQVCRAWRDAAIE 260
P +S + E+L +FE+L +DR +VC + R A ++
Sbjct: 100 PISPTLSDMPTEILNQVFEKLEPKDRLACRKVCSSLRTAVVK 141
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,936,054
Number of Sequences: 27780
Number of extensions: 299714
Number of successful extensions: 815
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 772
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 814
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1560745544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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