Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021329
         (671 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A3DKM5 Cluster: Binding-protein-dependent transport sys...    37   0.39 
UniRef50_A1Z398 Cluster: NADH-ubiquinone oxidoreductase chain 5;...    36   0.89 
UniRef50_Q04WB4 Cluster: Peptidase, M50 family; n=4; Leptospira|...    35   2.1  
UniRef50_A2DTE8 Cluster: Clan CA, family C2, calpain-like cystei...    35   2.1  
UniRef50_Q8I4X9 Cluster: Putative uncharacterized protein; n=1; ...    34   2.7  
UniRef50_Q557G7 Cluster: Putative uncharacterized protein; n=1; ...    34   3.6  
UniRef50_Q838Y3 Cluster: Membrane protein, putative; n=1; Entero...    33   6.3  
UniRef50_Q4Y399 Cluster: Putative uncharacterized protein; n=1; ...    33   6.3  
UniRef50_Q6LFI3 Cluster: Putative uncharacterized protein; n=1; ...    33   8.3  
UniRef50_A0NDS1 Cluster: ENSANGP00000030277; n=1; Anopheles gamb...    33   8.3  
UniRef50_Q5AGI5 Cluster: Putative uncharacterized protein; n=2; ...    33   8.3  

>UniRef50_A3DKM5 Cluster: Binding-protein-dependent transport
           systems inner membrane component; n=1; Staphylothermus
           marinus F1|Rep: Binding-protein-dependent transport
           systems inner membrane component - Staphylothermus
           marinus (strain ATCC 43588 / DSM 3639 / F1)
          Length = 248

 Score = 37.1 bits (82), Expect = 0.39
 Identities = 14/30 (46%), Positives = 20/30 (66%)
 Frame = -2

Query: 385 VTYVSLELFLFFLLMWSFIVFFLPKYFFPF 296
           + YV L +F F + MW F+ F+ PKY FP+
Sbjct: 5   IYYVFLSIF-FIITMWYFLAFYSPKYLFPY 33


>UniRef50_A1Z398 Cluster: NADH-ubiquinone oxidoreductase chain 5;
           n=3; Romanomermis|Rep: NADH-ubiquinone oxidoreductase
           chain 5 - Romanomermis nielseni
          Length = 493

 Score = 35.9 bits (79), Expect = 0.89
 Identities = 13/44 (29%), Positives = 28/44 (63%)
 Frame = -1

Query: 416 FVSIEFSLFICNICIIGTFSFLFTNVVFYCLLFTKVFLSLHYFK 285
           F+++E SL + N+  + +  F+F N++ + +++    LS +YFK
Sbjct: 31  FLNLEISLSLLNVIFMISLMFIFKNILKFSIIYMSKTLSFYYFK 74


>UniRef50_Q04WB4 Cluster: Peptidase, M50 family; n=4;
           Leptospira|Rep: Peptidase, M50 family - Leptospira
           borgpetersenii serovar Hardjo-bovis (strain JB197)
          Length = 308

 Score = 34.7 bits (76), Expect = 2.1
 Identities = 14/40 (35%), Positives = 25/40 (62%)
 Frame = -2

Query: 412 YRLNLAFLFVTYVSLELFLFFLLMWSFIVFFLPKYFFPFI 293
           YR  + +LF  ++ L L+ F  L+W F+++F+ K   PF+
Sbjct: 212 YRNWIYYLFTAFLLLCLWNFSWLLWGFLIYFIIKVEHPFV 251


>UniRef50_A2DTE8 Cluster: Clan CA, family C2, calpain-like cysteine
           peptidase; n=1; Trichomonas vaginalis G3|Rep: Clan CA,
           family C2, calpain-like cysteine peptidase - Trichomonas
           vaginalis G3
          Length = 1437

 Score = 34.7 bits (76), Expect = 2.1
 Identities = 15/41 (36%), Positives = 24/41 (58%)
 Frame = -1

Query: 392 FICNICIIGTFSFLFTNVVFYCLLFTKVFLSLHYFKSTSHG 270
           FIC I +  +  F F+++VF  L+ T  F   ++F+S S G
Sbjct: 642 FICTIVVAASGIFYFSHIVFEVLIVTLCFALTYFFESKSFG 682


>UniRef50_Q8I4X9 Cluster: Putative uncharacterized protein; n=1;
            Plasmodium falciparum 3D7|Rep: Putative uncharacterized
            protein - Plasmodium falciparum (isolate 3D7)
          Length = 1482

 Score = 34.3 bits (75), Expect = 2.7
 Identities = 14/61 (22%), Positives = 34/61 (55%)
 Frame = -1

Query: 350  FTNVVFYCLLFTKVFLSLHYFKSTSHGY*T*YSECNKCMYNQRFIHLIYSRVLTMTMNQM 171
            + N+ +Y  L+T + LSLH ++   H +   Y   N+   +   ++L  + ++++ +N++
Sbjct: 875  YNNIPYYKKLYTYIHLSLHNYEEMYHNF---YCSINRLFISNYILNLYLTNLVSVYLNKL 931

Query: 170  I 168
            I
Sbjct: 932  I 932


>UniRef50_Q557G7 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 57

 Score = 33.9 bits (74), Expect = 3.6
 Identities = 16/29 (55%), Positives = 20/29 (68%)
 Frame = -2

Query: 361 FLFFLLMWSFIVFFLPKYFFPFIILSQQV 275
           F FFLL + FI+FFL  YFF F ++S  V
Sbjct: 12  FYFFLLFFVFILFFLFIYFFLFWVVSANV 40


>UniRef50_Q838Y3 Cluster: Membrane protein, putative; n=1;
           Enterococcus faecalis|Rep: Membrane protein, putative -
           Enterococcus faecalis (Streptococcus faecalis)
          Length = 456

 Score = 33.1 bits (72), Expect = 6.3
 Identities = 15/26 (57%), Positives = 20/26 (76%)
 Frame = -2

Query: 406 LNLAFLFVTYVSLELFLFFLLMWSFI 329
           L+L  LF+ Y S+ LFLF LL++SFI
Sbjct: 67  LSLPLLFIPYDSILLFLFLLLLFSFI 92


>UniRef50_Q4Y399 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium chabaudi|Rep: Putative uncharacterized
           protein - Plasmodium chabaudi
          Length = 83

 Score = 33.1 bits (72), Expect = 6.3
 Identities = 15/39 (38%), Positives = 25/39 (64%)
 Frame = -2

Query: 412 YRLNLAFLFVTYVSLELFLFFLLMWSFIVFFLPKYFFPF 296
           Y L + FLF  Y  ++L+ +F L++ F +F+L  +FF F
Sbjct: 7   YHLMICFLFFVYHQVKLYYYFFLIF-FELFYLVYFFFFF 44


>UniRef50_Q6LFI3 Cluster: Putative uncharacterized protein; n=1;
            Plasmodium falciparum 3D7|Rep: Putative uncharacterized
            protein - Plasmodium falciparum (isolate 3D7)
          Length = 1948

 Score = 32.7 bits (71), Expect = 8.3
 Identities = 14/36 (38%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
 Frame = -2

Query: 400  LAFLFVTYVSLELFLFFL-LMWSFIVFFLPKYFFPF 296
            L FLF+ Y+ + LF++FL + +SF ++    YF P+
Sbjct: 1433 LIFLFIFYLFIYLFVYFLFIFYSFYIYIFIYYFKPW 1468


>UniRef50_A0NDS1 Cluster: ENSANGP00000030277; n=1; Anopheles gambiae
           str. PEST|Rep: ENSANGP00000030277 - Anopheles gambiae
           str. PEST
          Length = 124

 Score = 32.7 bits (71), Expect = 8.3
 Identities = 13/38 (34%), Positives = 23/38 (60%)
 Frame = -2

Query: 394 FLFVTYVSLELFLFFLLMWSFIVFFLPKYFFPFIILSQ 281
           +LF+ Y  ++L +FFL+++SFI      Y F + I  +
Sbjct: 16  YLFIVYFFIDLLIFFLVIYSFIFNQFLTYLFIYFIFKK 53


>UniRef50_Q5AGI5 Cluster: Putative uncharacterized protein; n=2;
           Candida albicans|Rep: Putative uncharacterized protein -
           Candida albicans (Yeast)
          Length = 191

 Score = 32.7 bits (71), Expect = 8.3
 Identities = 15/47 (31%), Positives = 26/47 (55%)
 Frame = -2

Query: 412 YRLNLAFLFVTYVSLELFLFFLLMWSFIVFFLPKYFFPFIILSQQVM 272
           +   + F F+ ++ L LFLF +L +  I+FFL   FF  I+    ++
Sbjct: 23  FLFTMVFRFLFFMILFLFLFMILFFLMILFFLMILFFLMILFFLMIL 69


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 526,085,887
Number of Sequences: 1657284
Number of extensions: 8868037
Number of successful extensions: 21614
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 20208
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21416
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 51652897375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)