Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021329
         (671 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC041772-1|AAH41772.2|  549|Homo sapiens SPNS2 protein protein.        31   5.0  
AY197607-1|AAP37476.1|  481|Homo sapiens membrane-associated pho...    30   8.7  
AK128034-1|BAC87239.1|  130|Homo sapiens protein ( Homo sapiens ...    30   8.7  

>BC041772-1|AAH41772.2|  549|Homo sapiens SPNS2 protein protein.
          Length = 549

 Score = 30.7 bits (66), Expect = 5.0
 Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
 Frame = -2

Query: 349 LLMWSFIVF---FLPKYFFPFIILSQQVMGIKHNIQSATSVCITKDLYT 212
           +  WS + F   F+P+ +F  ++LS+ ++GI     S  +  I  DL+T
Sbjct: 175 IFFWSAVTFSSSFIPQQYFWLLVLSRGLVGIGEASYSTIAPTIIGDLFT 223


>AY197607-1|AAP37476.1|  481|Homo sapiens membrane-associated
           phospholipase A1 beta protein.
          Length = 481

 Score = 29.9 bits (64), Expect = 8.7
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = -3

Query: 537 DTSCPYTSCSLRFQNKLLVPFETSVPSAFSFQALPQ 430
           DTS  Y  C+  F   ++VP +T +  +FSF+ L Q
Sbjct: 348 DTSGTYPFCTYYFVLSIIVPDKTMMDGSFSFKLLNQ 383


>AK128034-1|BAC87239.1|  130|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46153 fis, clone TESTI4001037. ).
          Length = 130

 Score = 29.9 bits (64), Expect = 8.7
 Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
 Frame = -2

Query: 406 LNLAFLFVTYVSLELFLFFLLMWSFIVFFLPKYF--FPFIILS 284
           L L+F F  ++S     F   + SF+  FLP +   FPF+  S
Sbjct: 25  LFLSFFFFLFLSFSFSFFLFSLPSFLPSFLPSFLPSFPFLFFS 67


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,352,862
Number of Sequences: 237096
Number of extensions: 1428152
Number of successful extensions: 6234
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6162
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6234
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7647512560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)