Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021328
         (699 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR prot...    26   1.3  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    24   5.3  
AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced ...    24   5.3  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           23   7.0  
AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.           23   9.2  
AB097148-1|BAC82627.1|  357|Anopheles gambiae gag-like protein p...    23   9.2  

>AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR
           protein.
          Length = 502

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -3

Query: 334 NTHLFQNCCSIISYCNFSIGCLNHLI 257
           N +L QNCC +    NF I  + + +
Sbjct: 406 NIYLVQNCCQLFFMTNFGINFILYCV 431


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = +3

Query: 579 GSCNITKFQSSFTTLNYF 632
           G  NI     +FTTLNYF
Sbjct: 368 GFINIQAHHPNFTTLNYF 385


>AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced
           homeotic protein protein.
          Length = 372

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 10/41 (24%), Positives = 23/41 (56%)
 Frame = +1

Query: 523 VVENMSTPVDLNNEDALLKAAATSLNSKVVSQHSTILAPIA 645
           VVE++S  +   N    + +++T+ N+  +S  + +  P+A
Sbjct: 183 VVESVSRSLKSGNPSTAVSSSSTNNNTSNISNRNQVNLPLA 223


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +3

Query: 93  LNINIMAPKAGGDAIKANSSVYKDKSKPTDIR 188
           LN+N+   +AGG ++  N S     S+P+  R
Sbjct: 879 LNLNLDRSEAGGRSLCTNGSSSGRDSQPSSAR 910


>AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.
          Length = 897

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = -1

Query: 453 SFSAESNNAPAITTTDVVPSPASIS*ARDN 364
           +FS E+N+   +   ++ P+ ASI+   DN
Sbjct: 663 TFSVENNSFGVLKVHELKPNGASIAVTEDN 692


>AB097148-1|BAC82627.1|  357|Anopheles gambiae gag-like protein
           protein.
          Length = 357

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 13/45 (28%), Positives = 21/45 (46%)
 Frame = +1

Query: 511 LALQVVENMSTPVDLNNEDALLKAAATSLNSKVVSQHSTILAPIA 645
           LA      +STP+D ++  A    A   +   VV+  +   AP+A
Sbjct: 247 LAAGAPATVSTPMDKDDPAAAAAPATAEVPGAVVANPAATSAPLA 291


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 695,256
Number of Sequences: 2352
Number of extensions: 12415
Number of successful extensions: 24
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)