Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021327
         (667 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   3.9  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   6.9  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.1  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   9.1  
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    21   9.1  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -1

Query: 364 LPSLSKTRKASRISXRYPCPSSCAPSLS 281
           LP  S TR  S+ + + P P   +PS++
Sbjct: 680 LPPESPTRDKSKQNEKSPSPQQRSPSVT 707


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -2

Query: 48  ATLKNHRLRRKSDLVP 1
           ATLK+H+L   SD  P
Sbjct: 559 ATLKDHKLAEASDKDP 574


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = -3

Query: 425  SEFLSEVGHDVAQLGRGDEAVAVLVEDAEGLAD 327
            S+ + + G+DV  L +  + VAV+  D  G  D
Sbjct: 1565 SKTVIDAGYDVPVLAQNLDWVAVMTYDFHGQWD 1597


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -2

Query: 318 AIRVLHLARHHCQELGKVYR 259
           AI+     RH  Q+L +VYR
Sbjct: 601 AIKTSPKMRHELQKLAQVYR 620


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -3

Query: 563 IFKFSAFYTHTSRRLTSTYHGDELF 489
           +F  +AF T  S    + Y GDE++
Sbjct: 198 LFIANAFITSQSCENATLYSGDEMY 222


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,158
Number of Sequences: 336
Number of extensions: 2325
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17281430
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)