Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021327
(667 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|ch... 99 7e-22
SPAP8A3.08 |cdc4||myosin II light chain|Schizosaccharomyces pomb... 71 2e-13
SPAC29A4.05 |cam2||myosin I light chain Cam2|Schizosaccharomyces... 63 4e-11
SPCC1682.04 |cdc31||centrin|Schizosaccharomyces pombe|chr 3|||Ma... 62 5e-11
SPAC926.03 |rlc1||myosin II regulatory light chain |Schizosaccha... 54 2e-08
SPCC830.06 |||calcineurin regulatory subunit |Schizosaccharomyce... 52 6e-08
SPAC1687.14c |||EF hand family protein, unknown role|Schizosacch... 41 1e-04
SPBC1778.06c |fim1||fimbrin|Schizosaccharomyces pombe|chr 2|||Ma... 35 0.012
SPBC11G11.02c |end3||actin cortical patch component End3 |Schizo... 33 0.028
SPAC18B11.04 |ncs1||related to neuronal calcium sensor Ncs1|Schi... 31 0.11
SPCC548.07c |ght1||hexose transporter Ght1 |Schizosaccharomyces ... 31 0.15
SPBC4B4.08 |ght2||hexose transporter Ght2 |Schizosaccharomyces p... 29 0.46
SPCC1183.11 ||SPCC31H12.01|MS ion channel protein 1|Schizosaccha... 28 1.1
SPCC663.05c |cia1||histone chaperone Cia1|Schizosaccharomyces po... 27 2.4
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 27 3.2
SPAC1327.01c ||SPAC1783.09c, SPAC18G6.16c|transcription factor, ... 27 3.2
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 27 3.2
SPBC418.02 |||NatA N-acetyltransferase complex subunit |Schizosa... 26 4.2
SPBC776.15c |||dihydrolipoamide S-succinyltransferase, e2 compon... 26 4.2
SPBC530.06c |||translation initiation factor eIF3 alpha subunit ... 26 5.6
SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr 3|||Ma... 25 7.4
SPAC6G9.04 |mug79||meiotically upregulated gene Mug79|Schizosacc... 25 9.8
>SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 150
Score = 98.7 bits (235), Expect = 7e-22
Identities = 46/56 (82%), Positives = 51/56 (91%)
Frame = +2
Query: 86 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 253
LT+EQIAEF+EAFSLFD+D DG IT+ ELG VMRSLGQ+PT AELQDMINEVDADG
Sbjct: 6 LTDEQIAEFREAFSLFDRDQDGNITSNELGVVMRSLGQSPTAAELQDMINEVDADG 61
Score = 96.7 bits (230), Expect = 3e-21
Identities = 42/62 (67%), Positives = 53/62 (85%)
Frame = +3
Query: 324 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVT 503
E+REAF+VFDKDGNG+I+ EL HV+T+LGE+L+ EEV +MIREAD DGDG +NYEEF
Sbjct: 86 EVREAFKVFDKDGNGYITVEELTHVLTSLGERLSQEEVADMIREADTDGDGVINYEEFSR 145
Query: 504 MI 509
+I
Sbjct: 146 VI 147
Score = 65.7 bits (153), Expect = 6e-12
Identities = 30/64 (46%), Positives = 45/64 (70%)
Frame = +3
Query: 324 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVT 503
E REAF +FD+D +G I++ EL VM +LG+ T E+ +MI E D DG+G +++ EF+T
Sbjct: 13 EFREAFSLFDRDQDGNITSNELGVVMRSLGQSPTAAELQDMINEVDADGNGTIDFTEFLT 72
Query: 504 MIRR 515
M+ R
Sbjct: 73 MMAR 76
Score = 58.4 bits (135), Expect = 9e-10
Identities = 29/60 (48%), Positives = 40/60 (66%)
Frame = +2
Query: 74 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 253
M D EE++ +EAF +FDKDG+G IT +EL V+ SLG+ ++ E+ DMI E D DG
Sbjct: 78 MKDTDNEEEV---REAFKVFDKDGNGYITVEELTHVLTSLGERLSQEEVADMIREADTDG 134
Score = 48.0 bits (109), Expect = 1e-06
Identities = 21/23 (91%), Positives = 22/23 (95%)
Frame = +1
Query: 253 NGTIDFPEFLTMMARKMKDTDSE 321
NGTIDF EFLTMMARKMKDTD+E
Sbjct: 62 NGTIDFTEFLTMMARKMKDTDNE 84
Score = 36.7 bits (81), Expect = 0.003
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Frame = +3
Query: 324 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREA----DIDGDGQVNYE 491
E+++ D DGNG I E +T + K+ D + +E +REA D DG+G + E
Sbjct: 49 ELQDMINEVDADGNGTIDFTEF---LTMMARKMKDTDNEEEVREAFKVFDKDGNGYITVE 105
Query: 492 EFVTMI 509
E ++
Sbjct: 106 ELTHVL 111
Score = 31.5 bits (68), Expect = 0.11
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +2
Query: 104 AEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADG 253
AE ++ + D DG+GTI E T+M R + E E+++ D DG
Sbjct: 48 AELQDMINEVDADGNGTIDFTEFLTMMARKMKDTDNEEEVREAFKVFDKDG 98
>SPAP8A3.08 |cdc4||myosin II light chain|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 141
Score = 70.9 bits (166), Expect = 2e-13
Identities = 32/62 (51%), Positives = 45/62 (72%)
Frame = +3
Query: 324 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVT 503
E + F+VFDKD G I ELR+V+T+LGEKL++EE+DE+++ + DG VNY +FV
Sbjct: 78 EFVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKGVPVK-DGMVNYHDFVQ 136
Query: 504 MI 509
MI
Sbjct: 137 MI 138
Score = 48.0 bits (109), Expect = 1e-06
Identities = 20/47 (42%), Positives = 33/47 (70%)
Frame = +2
Query: 110 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD 250
+K+AFSLFD+ G G I +G ++R+ GQNPT AE+ ++ + + A+
Sbjct: 8 YKQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAEITEIESTLPAE 54
Score = 37.1 bits (82), Expect = 0.002
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = +2
Query: 107 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEV 241
EF + F +FDKD G I EL V+ SLG+ + E+ +++ V
Sbjct: 78 EFVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKGV 122
Score = 28.7 bits (61), Expect = 0.80
Identities = 16/62 (25%), Positives = 34/62 (54%)
Frame = +3
Query: 330 REAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMI 509
++AF +FD+ G G I + ++ G+ T E+ E+ E+ + +V+ E+F+ ++
Sbjct: 9 KQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAEITEI--ESTL--PAEVDMEQFLQVL 64
Query: 510 RR 515
R
Sbjct: 65 NR 66
>SPAC29A4.05 |cam2||myosin I light chain Cam2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 143
Score = 62.9 bits (146), Expect = 4e-11
Identities = 30/62 (48%), Positives = 39/62 (62%)
Frame = +3
Query: 324 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVT 503
E +AFRVFDKD +G+I A+ M LGEKL+D EV M++EAD G +Y +FV
Sbjct: 79 EYIKAFRVFDKDNSGYIETAKFADYMKTLGEKLSDNEVQLMVQEADPTNSGSFDYYDFVQ 138
Query: 504 MI 509
I
Sbjct: 139 RI 140
Score = 56.0 bits (129), Expect = 5e-09
Identities = 27/51 (52%), Positives = 36/51 (70%)
Frame = +2
Query: 89 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEV 241
++EQ E KEAF L+D D DG I T +G+V+RSLG N T+AEL + NE+
Sbjct: 4 SKEQTDEMKEAFVLYDIDKDGLIPTSHVGSVLRSLGINVTDAELAKLSNEL 54
Score = 43.2 bits (97), Expect = 3e-05
Identities = 22/60 (36%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Frame = +2
Query: 68 STMADQLTE-EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVD 244
S ++++L E E E+ +AF +FDKD G I T + M++LG+ ++ E+Q M+ E D
Sbjct: 65 SFVSNKLRETESEEEYIKAFRVFDKDNSGYIETAKFADYMKTLGEKLSDNEVQLMVQEAD 124
Score = 34.7 bits (76), Expect = 0.012
Identities = 20/67 (29%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Frame = +3
Query: 324 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVT 503
E++EAF ++D D +G I + + V+ +LG +TD E+ ++ E D + + FV+
Sbjct: 10 EMKEAFVLYDIDKDGLIPTSHVGSVLRSLGINVTDAELAKLSNELG-DAIDEKKFMSFVS 68
Query: 504 -MIRRSE 521
+R +E
Sbjct: 69 NKLRETE 75
>SPCC1682.04 |cdc31||centrin|Schizosaccharomyces pombe|chr
3|||Manual
Length = 176
Score = 62.5 bits (145), Expect = 5e-11
Identities = 27/62 (43%), Positives = 40/62 (64%)
Frame = +3
Query: 324 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVT 503
EI+ AF +FD D G IS LR V L E + D+E++ MI E D+D DG++N +EF+
Sbjct: 111 EIKRAFELFDDDETGKISLRNLRRVAKELNENIDDQELEAMIEEFDLDQDGEINEQEFIA 170
Query: 504 MI 509
++
Sbjct: 171 IM 172
Score = 48.8 bits (111), Expect = 7e-07
Identities = 23/57 (40%), Positives = 33/57 (57%)
Frame = +2
Query: 83 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 253
++TEEQ + EAF LFD D D I EL MR+LG N ++E+ ++ + D G
Sbjct: 30 EITEEQRQDINEAFKLFDSDKDNAIDYHELRAAMRALGFNAEKSEVLKILRDFDKTG 86
Score = 46.4 bits (105), Expect = 4e-06
Identities = 24/64 (37%), Positives = 36/64 (56%)
Frame = +3
Query: 318 RXEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 497
R +I EAF++FD D + I ELR M LG EV +++R+ D G G + E+F
Sbjct: 36 RQDINEAFKLFDSDKDNAIDYHELRAAMRALGFNAEKSEVLKILRDFDKTGKGYLQMEDF 95
Query: 498 VTMI 509
V ++
Sbjct: 96 VRVM 99
Score = 29.1 bits (62), Expect = 0.60
Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +3
Query: 318 RXEIREAFRVFDKDGNGFISAAELRHVMT-NLGEKLTDEEVDEMIREADIDGDGQVN 485
+ E+ + R FDK G G++ + VMT + E+ EE+ D D G+++
Sbjct: 72 KSEVLKILRDFDKTGKGYLQMEDFVRVMTEKIVERDPLEEIKRAFELFDDDETGKIS 128
>SPAC926.03 |rlc1||myosin II regulatory light chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 184
Score = 54.0 bits (124), Expect = 2e-08
Identities = 24/54 (44%), Positives = 35/54 (64%)
Frame = +2
Query: 83 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVD 244
QLT QI E KEAF+L DKDGDG I +++ T++ SL Q+ +E + M ++
Sbjct: 41 QLTSSQIQELKEAFALLDKDGDGNIGREDVKTMLTSLNQDASEDSINHMFESIN 94
Score = 39.9 bits (89), Expect = 3e-04
Identities = 20/68 (29%), Positives = 38/68 (55%)
Frame = +3
Query: 318 RXEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 497
R ++ EAF FD +G I + +R ++++G+++ +EV+ ++R G YE+F
Sbjct: 116 RNDLLEAFSTFDDTQSGKIPISTMRDALSSMGDRMDPQEVESILR--SYTSHGVFYYEKF 173
Query: 498 VTMIRRSE 521
V I S+
Sbjct: 174 VDAIAGSK 181
Score = 37.5 bits (83), Expect = 0.002
Identities = 13/41 (31%), Positives = 29/41 (70%)
Frame = +3
Query: 324 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEM 446
E++EAF + DKDG+G I +++ ++T+L + +++ ++ M
Sbjct: 49 ELKEAFALLDKDGDGNIGREDVKTMLTSLNQDASEDSINHM 89
Score = 25.8 bits (54), Expect = 5.6
Identities = 12/46 (26%), Positives = 20/46 (43%)
Frame = +2
Query: 116 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 253
EAFS FD G I + + S+G E++ ++ + G
Sbjct: 121 EAFSTFDDTQSGKIPISTMRDALSSMGDRMDPQEVESILRSYTSHG 166
Score = 25.4 bits (53), Expect = 7.4
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Frame = +3
Query: 372 ISAAELRHVMTNLGEKLTDEEVDEMIREA----DIDGDGQVNYEEFVTMIRRSEPPAS 533
++A + + +LT ++ E+ +EA D DGDG + E+ TM+ AS
Sbjct: 26 VAAQAAKRASSGAFAQLTSSQIQEL-KEAFALLDKDGDGNIGREDVKTMLTSLNQDAS 82
>SPCC830.06 |||calcineurin regulatory subunit |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 174
Score = 52.4 bits (120), Expect = 6e-08
Identities = 31/86 (36%), Positives = 51/86 (59%), Gaps = 6/86 (6%)
Frame = +3
Query: 309 HG*RXE-IREAFRVFDKDGNGFISAAELRHVM-----TNLGEKLTDEEVDEMIREADIDG 470
HG + E ++ AF+++D D +G+IS EL V+ TNL E + VD+ I E D D
Sbjct: 88 HGNKEEKLKFAFKIYDIDRDGYISNGELYLVLKMMVGTNLREDQLQQIVDKTIMEVDKDR 147
Query: 471 DGQVNYEEFVTMIRRSEPPASVCVKS 548
DG++++EEF ++ S +S+ + S
Sbjct: 148 DGKISFEEFKDIVSGSNVTSSMTLDS 173
>SPAC1687.14c |||EF hand family protein, unknown
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 76
Score = 41.1 bits (92), Expect = 1e-04
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Frame = +3
Query: 324 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDG-DGQVNYEEFV 500
E EAF +FD G+I +LR LGE LT E++ M+ D+ G +G+V+ EEF
Sbjct: 13 EAEEAFDLFDVTHKGYIDFEDLRRSCAQLGENLTKEQLQLML---DLAGTNGKVSREEFA 69
Query: 501 TM 506
+
Sbjct: 70 EL 71
Score = 33.5 bits (73), Expect = 0.028
Identities = 19/53 (35%), Positives = 28/53 (52%)
Frame = +2
Query: 95 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 253
E E +EAF LFD G I ++L LG+N T+ +LQ M++ +G
Sbjct: 9 EMDEEAEEAFDLFDVTHKGYIDFEDLRRSCAQLGENLTKEQLQLMLDLAGTNG 61
>SPBC1778.06c |fim1||fimbrin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 614
Score = 34.7 bits (76), Expect = 0.012
Identities = 18/58 (31%), Positives = 30/58 (51%)
Frame = +3
Query: 327 IREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 500
+ + F D DG G++ + +K + +EV E IRE ++D G+V E+FV
Sbjct: 21 LTDQFNKLDVDGKGYLDQPTTIKAFED-SKKGSYDEVREAIREVNVDSSGRVEPEDFV 77
>SPBC11G11.02c |end3||actin cortical patch component End3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 375
Score = 33.5 bits (73), Expect = 0.028
Identities = 17/60 (28%), Positives = 37/60 (61%)
Frame = +3
Query: 333 EAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMIR 512
E FR + + NG++S ++ V+ + KL+ ++++++ ADID DG +++EF ++
Sbjct: 11 EIFRGLNPE-NGYLSGSKAAGVLRS--SKLSSDKLEKIWDLADIDDDGMFDFDEFAIAMK 67
>SPAC18B11.04 |ncs1||related to neuronal calcium sensor
Ncs1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 190
Score = 31.5 bits (68), Expect = 0.11
Identities = 14/57 (24%), Positives = 30/57 (52%)
Frame = +3
Query: 339 FRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMI 509
F VFD D NG+I E ++ ++++ + D+D +G ++Y+E + ++
Sbjct: 69 FNVFDADKNGYIDFKEFICALSVTSRGELNDKLIWAFQLYDLDNNGLISYDEMLRIV 125
Score = 28.7 bits (61), Expect = 0.80
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 12/66 (18%)
Frame = +3
Query: 336 AFRVFDKDGNGFISAAELRHVMTNLGE------KLTDEE------VDEMIREADIDGDGQ 479
AF+++D D NG IS E+ ++ + + KL ++E V+++ D + DGQ
Sbjct: 104 AFQLYDLDNNGLISYDEMLRIVDAIYKMVGSMVKLPEDEDTPEKRVNKIFNMMDKNKDGQ 163
Query: 480 VNYEEF 497
+ EEF
Sbjct: 164 LTLEEF 169
>SPCC548.07c |ght1||hexose transporter Ght1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 557
Score = 31.1 bits (67), Expect = 0.15
Identities = 15/45 (33%), Positives = 27/45 (60%)
Frame = -3
Query: 473 VAVDIGLANHLVDLLVSEFLSEVGHDVAQLGRGDEAVAVLVEDAE 339
V++ I L ++ L+ FLSE + +G+ DEA+ V+ ++AE
Sbjct: 180 VSIGINLLWGIITLVGVSFLSESPRYLVSIGKDDEAIQVMCKNAE 224
>SPBC4B4.08 |ght2||hexose transporter Ght2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 531
Score = 29.5 bits (63), Expect = 0.46
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = -3
Query: 473 VAVDIGLANHLVDLLVSEFLSEVGHDVAQLGRGDEAVAVLVEDAEGLAD 327
V++ I L ++ ++ FL E + Q+G+ +EAV VL E AE D
Sbjct: 184 VSIGINLLWGIITMIGILFLPESPRYLIQVGKDEEAVRVLSESAELFPD 232
>SPCC1183.11 ||SPCC31H12.01|MS ion channel protein
1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1011
Score = 28.3 bits (60), Expect = 1.1
Identities = 15/56 (26%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = +2
Query: 80 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG--QNPTEAELQDMINEV 241
D+ E A + +S+FD+D +G IT +E+ +G + A L+D+ + +
Sbjct: 538 DETGEVDNATLEACYSIFDRDLNGDITCEEIELACVEIGKERKSISASLRDLNDSI 593
>SPCC663.05c |cia1||histone chaperone Cia1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 262
Score = 27.1 bits (57), Expect = 2.4
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +3
Query: 396 VMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 494
V + E+ +EE DEM E D +G+G EE
Sbjct: 170 VQPDADEEEEEEEADEMEEEFDEEGEGDEEEEE 202
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 26.6 bits (56), Expect = 3.2
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 8/46 (17%)
Frame = +3
Query: 348 FDKDGNGFISAAELRH--------VMTNLGEKLTDEEVDEMIREAD 461
FD D NG ++ + L +TN +L+ EE+D M+ EA+
Sbjct: 476 FDVDANGILNVSALEKGTGKTQKITITNDKGRLSKEEIDRMVSEAE 521
>SPAC1327.01c ||SPAC1783.09c, SPAC18G6.16c|transcription factor,
zf-fungal binuclear cluster type |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 977
Score = 26.6 bits (56), Expect = 3.2
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = -3
Query: 224 LEVRLLWGSVLATSSRCPALWS*WCHR 144
LE++ WGS+ A + +W+ W R
Sbjct: 850 LEMKNYWGSISALCDKMSEIWADWVQR 876
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 26.6 bits (56), Expect = 3.2
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 8/46 (17%)
Frame = +3
Query: 348 FDKDGNGFISAAELRH--------VMTNLGEKLTDEEVDEMIREAD 461
FD D NG ++ + L +TN +L+ EE+D M+ EA+
Sbjct: 476 FDVDANGILNVSALEKGTGKTQKITITNDKGRLSKEEIDRMVAEAE 521
>SPBC418.02 |||NatA N-acetyltransferase complex subunit
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 26.2 bits (55), Expect = 4.2
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = -1
Query: 604 SNTMLILCVMKQNVYLNSLLFTHTLAGGSLRR 509
S T+L + +M QN +LN+ F H A + R+
Sbjct: 199 SQTVLEILLMNQNSFLNNFNFEHIKADFAFRQ 230
>SPBC776.15c |||dihydrolipoamide S-succinyltransferase, e2 component
of oxoglutarate dehydrogenase complex
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 452
Score = 26.2 bits (55), Expect = 4.2
Identities = 13/36 (36%), Positives = 16/36 (44%)
Frame = -1
Query: 388 SSAAEMKPLPSLSKTRKASRISXRYPCPSSCAPSLS 281
S E KP+P L +K S S P P + P S
Sbjct: 153 SKPIEEKPMPDLGAEQKESAPSSTKPAPDAKEPEFS 188
>SPBC530.06c |||translation initiation factor eIF3 alpha subunit
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1173
Score = 25.8 bits (54), Expect = 5.6
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = -3
Query: 485 IDLAVAVDIGLANHLVDLLVSEFLSEVGHDVAQL 384
+D++V +D+ +H L S LS HDV Q+
Sbjct: 28 VDVSVDIDVIFPDHTQTLSFSLLLSNTIHDVRQV 61
>SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 630
Score = 25.4 bits (53), Expect = 7.4
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +2
Query: 116 EAFSLFDKDGDGTITTKELGTVMR 187
+ F FD+D DG + +EL + R
Sbjct: 311 DLFYQFDRDNDGALNNEELSALFR 334
>SPAC6G9.04 |mug79||meiotically upregulated gene
Mug79|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1318
Score = 25.0 bits (52), Expect = 9.8
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +3
Query: 588 ISIVLDLHFSSVCDKLNTVIVSVRKF 665
+ I++DLH S+ KLN+ +V + F
Sbjct: 836 VLILIDLHKSTYSKKLNSYVVPMETF 861
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,272,735
Number of Sequences: 5004
Number of extensions: 40841
Number of successful extensions: 160
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 132
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 157
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 303841898
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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