Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021324
(669 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 25 0.65
AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor typ... 24 1.1
DQ855485-1|ABH88172.1| 128|Apis mellifera chemosensory protein ... 23 2.0
AJ973400-1|CAJ01447.1| 128|Apis mellifera hypothetical protein ... 23 2.0
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 23 3.5
DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related pro... 23 3.5
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 23 3.5
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 23 3.5
AY263366-1|AAO92605.1| 139|Apis mellifera octopamine receptor p... 22 4.6
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 22 4.6
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 22 4.6
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 22 6.1
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 25.0 bits (52), Expect = 0.65
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -3
Query: 328 VHFLRRIALICRLCCGDLDLAVAW 257
+H R L C + GDL L+++W
Sbjct: 622 LHLGERTTLTCSVTRGDLPLSISW 645
>AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor type
D2 protein.
Length = 456
Score = 24.2 bits (50), Expect = 1.1
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -2
Query: 65 FVNCWL*YFITRLKSSSC 12
F+ CWL +F+ L S C
Sbjct: 344 FIICWLPFFVVNLWSGFC 361
>DQ855485-1|ABH88172.1| 128|Apis mellifera chemosensory protein 4
protein.
Length = 128
Score = 23.4 bits (48), Expect = 2.0
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +1
Query: 253 NATPPQDQDLRNIIDKLAQFVARNGPE 333
N P + + I DK+ QF+ N PE
Sbjct: 73 NECSPCSEKQKKIADKVVQFLIDNKPE 99
>AJ973400-1|CAJ01447.1| 128|Apis mellifera hypothetical protein
protein.
Length = 128
Score = 23.4 bits (48), Expect = 2.0
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +1
Query: 253 NATPPQDQDLRNIIDKLAQFVARNGPE 333
N P + + I DK+ QF+ N PE
Sbjct: 73 NECSPCSEKQKKIADKVVQFLIDNKPE 99
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 22.6 bits (46), Expect = 3.5
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = -1
Query: 645 WWVLRKGRRGRVDCKPTAEVQVPPPSRPLDPA 550
W V RK + C A + PP+RP D A
Sbjct: 141 WTVERKEGKVEGKCLIEALDAILPPTRPTDKA 172
>DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related
protein STG-1 protein.
Length = 397
Score = 22.6 bits (46), Expect = 3.5
Identities = 10/34 (29%), Positives = 15/34 (44%)
Frame = +1
Query: 340 KMTKNKQKNNPKFSFLYGGEYFNYYQYKVTTEQA 441
K+ P F++ YG + Y +TTE A
Sbjct: 211 KLRPRSSFQGPPFTYRYGFSFLLYVSGFITTEVA 244
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 22.6 bits (46), Expect = 3.5
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = -1
Query: 645 WWVLRKGRRGRVDCKPTAEVQVPPPSRPLDPA 550
W V RK + C A + PP+RP D A
Sbjct: 157 WTVERKEGKVEGKCLIEALDAILPPTRPTDKA 188
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 22.6 bits (46), Expect = 3.5
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = -1
Query: 645 WWVLRKGRRGRVDCKPTAEVQVPPPSRPLDPA 550
W V RK + C A + PP+RP D A
Sbjct: 214 WTVERKEGKVEGKCLIEALDAILPPTRPTDKA 245
>AY263366-1|AAO92605.1| 139|Apis mellifera octopamine receptor
protein.
Length = 139
Score = 22.2 bits (45), Expect = 4.6
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = -2
Query: 65 FVNCWL*YFITRLKSSSCR 9
F+ CWL +F L + CR
Sbjct: 18 FILCWLPFFTMYLVRAFCR 36
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 22.2 bits (45), Expect = 4.6
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = -2
Query: 65 FVNCWL*YFITRLKSSSCR 9
F+ CWL +F L + CR
Sbjct: 466 FILCWLPFFTMYLVRAFCR 484
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 22.2 bits (45), Expect = 4.6
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = +2
Query: 464 GRRHPLPPGPIWH 502
G+ +PL GP WH
Sbjct: 1456 GKDYPLRLGPCWH 1468
Score = 21.4 bits (43), Expect = 8.0
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = -3
Query: 331 PVHFLRRIALICRLCCGD 278
P HF+ ALI C GD
Sbjct: 1620 PEHFVASYALISNQCEGD 1637
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 21.8 bits (44), Expect = 6.1
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = -2
Query: 80 KTHRPFVNCWL*YFITRLKSSSCRIP 3
K HR ++ YF LKS+ C+ P
Sbjct: 44 KAHRVVLSACSPYFRELLKSTPCKHP 69
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,438
Number of Sequences: 438
Number of extensions: 3851
Number of successful extensions: 15
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20221290
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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