Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021320
         (528 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    25   0.54 
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    23   2.2  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   2.2  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   2.2  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    23   2.2  
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     22   2.9  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    22   2.9  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    22   2.9  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           22   2.9  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    22   2.9  
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    22   2.9  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    21   8.9  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    21   8.9  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 24.6 bits (51), Expect = 0.54
 Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 5/34 (14%)
 Frame = +2

Query: 413  AEMRRQARIS-----GGGALWCXPPPRCKFGCGC 499
            AE+RR++R+      GGG +W       K  CGC
Sbjct: 2641 AEIRRKSRLVKALKLGGGMVWALDLDDFKNRCGC 2674



 Score = 21.0 bits (42), Expect = 6.7
 Identities = 8/19 (42%), Positives = 9/19 (47%)
 Frame = +2

Query: 443  GGGALWCXPPPRCKFGCGC 499
            GGG +W       K  CGC
Sbjct: 2158 GGGMIWALDLDDFKNLCGC 2176


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = +1

Query: 424 ATGSDLRRRRPMVXSASALQVWLWLL 501
           A  S +  R P+  S+    +W+WL+
Sbjct: 112 ANASSVGSRNPIHTSSYMTGIWVWLI 137


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = +1

Query: 424 ATGSDLRRRRPMVXSASALQVWLWLL 501
           A  S +  R P+  S+    +W+WL+
Sbjct: 345 ANASSVGSRNPIHTSSYMTGIWVWLI 370



 Score = 21.0 bits (42), Expect = 6.7
 Identities = 6/7 (85%), Positives = 7/7 (100%)
 Frame = +1

Query: 487 WLWLLIF 507
           W+WLLIF
Sbjct: 121 WIWLLIF 127


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = +1

Query: 424 ATGSDLRRRRPMVXSASALQVWLWLL 501
           A  S +  R P+  S+    +W+WL+
Sbjct: 345 ANASSVGSRNPIHTSSYMTGIWVWLI 370



 Score = 21.0 bits (42), Expect = 6.7
 Identities = 6/7 (85%), Positives = 7/7 (100%)
 Frame = +1

Query: 487 WLWLLIF 507
           W+WLLIF
Sbjct: 121 WIWLLIF 127


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = -3

Query: 232 ITKFHSLIELKRCFKNKHVVNLTQKL 155
           +T+F +  EL  C K KH+VNL + L
Sbjct: 217 VTRFPT--ELTFCNKIKHLVNLHKNL 240


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 12/45 (26%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
 Frame = -1

Query: 528 IRNRFGI-KY*QPQPNLQRGGGXHHRAPPPEIRACRRISASVQKQ 397
           + N +G   Y  PQ +   G   HH+  PP +   + +  S+  Q
Sbjct: 75  LSNGYGYGNYYHPQLHSHHGPPIHHQIRPPILHDTQPMCESLNTQ 119


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 12/45 (26%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
 Frame = -1

Query: 528 IRNRFGI-KY*QPQPNLQRGGGXHHRAPPPEIRACRRISASVQKQ 397
           + N +G   Y  PQ +   G   HH+  PP +   + +  S+  Q
Sbjct: 75  LSNGYGYGNYYHPQLHSHHGPPIHHQIRPPILHDTQPMCESLNTQ 119


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 10/36 (27%), Positives = 16/36 (44%)
 Frame = -3

Query: 214 LIELKRCFKNKHVVNLTQKLPIIFRWKCPPKSDHAI 107
           +I+ K     K+        P + RW   PK++H I
Sbjct: 162 VIDSKVVDSRKNTTVSIDVFPAVARWMQDPKTNHGI 197


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 12/45 (26%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
 Frame = -1

Query: 528 IRNRFGI-KY*QPQPNLQRGGGXHHRAPPPEIRACRRISASVQKQ 397
           + N +G   Y  PQ +   G   HH+  PP +   + +  S+  Q
Sbjct: 75  LSNGYGYGNYYHPQLHSHHGPPIHHQIRPPILHDTQPMCESLNTQ 119


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 15/52 (28%), Positives = 22/52 (42%)
 Frame = -2

Query: 437 SEPVAASRPQYKSSNKAFSASR*RFLRPASCPHHPHLIATVHRSHASASDYV 282
           S   + S PQ+ SS+ + S +  R     S  HH H  A      A++   V
Sbjct: 37  SSSPSGSSPQHSSSSASTSPAA-RMYPYVSAAHHHHQAAAAAFGAAASGSMV 87


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 15/52 (28%), Positives = 22/52 (42%)
 Frame = -2

Query: 437 SEPVAASRPQYKSSNKAFSASR*RFLRPASCPHHPHLIATVHRSHASASDYV 282
           S   + S PQ+ SS+ + S +  R     S  HH H  A      A++   V
Sbjct: 37  SSSPSGSSPQHSSSSASTSPAA-RMYPYVSAAHHHHQAAAAAFGAAASGSMV 87


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +3

Query: 150 IGSFCVKLTTC 182
           I  FCVK+T C
Sbjct: 311 ISLFCVKVTNC 321


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = +2

Query: 59  FFRTSKRSAKKNPITLNC 112
           FF    +SAK  P  LNC
Sbjct: 199 FFLAEFKSAKTPPNKLNC 216


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,641
Number of Sequences: 336
Number of extensions: 2667
Number of successful extensions: 16
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12782794
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)