Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021320
         (528 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    25   1.2  
AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl s...    25   2.1  
AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin bi...    23   6.3  
AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin b...    23   6.3  
AF444782-1|AAL37903.1|  576|Anopheles gambiae Toll9 protein.           23   6.3  

>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 25.4 bits (53), Expect = 1.2
 Identities = 14/46 (30%), Positives = 23/46 (50%)
 Frame = -1

Query: 528 IRNRFGIKY*QPQPNLQRGGGXHHRAPPPEIRACRRISASVQKQQQ 391
           +R R   ++ QPQ   Q+      R  PP++R  R+     ++QQQ
Sbjct: 239 VRGRPSQRHRQPQQQQQQQQQQGERYVPPQLRQQRQQQQRPRQQQQ 284


>AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl
           symporter protein.
          Length = 1127

 Score = 24.6 bits (51), Expect = 2.1
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = +2

Query: 5   RGLFRQPLPRVATYRSLLFFRTSKR 79
           R   R+ LPR+  YR++L F+ ++R
Sbjct: 130 RHFTREALPRMDNYRNILSFQGNQR 154


>AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 567

 Score = 23.0 bits (47), Expect = 6.3
 Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 5/55 (9%)
 Frame = -1

Query: 237 LTLQSFI-PLSSLSD--ALKINT*LT*H-KNSRLYFDGNVPLSQITQ-FKVIGFF 88
           L ++SF+ P S+L D   LK N       K+S+  +D N+P+S+  Q  K + FF
Sbjct: 412 LIMKSFLCPESTLFDQTVLKCNWWFYVDCKSSKNLYDSNLPVSKSYQLMKALSFF 466


>AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 568

 Score = 23.0 bits (47), Expect = 6.3
 Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 5/55 (9%)
 Frame = -1

Query: 237 LTLQSFI-PLSSLSD--ALKINT*LT*H-KNSRLYFDGNVPLSQITQ-FKVIGFF 88
           L ++SF+ P S+L D   LK N       K+S+  +D N+P+S+  Q  K + FF
Sbjct: 420 LIMKSFLCPESTLFDQTVLKCNWWFYVDCKSSKNLYDSNLPVSKSYQLMKALSFF 474


>AF444782-1|AAL37903.1|  576|Anopheles gambiae Toll9 protein.
          Length = 576

 Score = 23.0 bits (47), Expect = 6.3
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = -1

Query: 288 LRSIERIIQYLVRCN 244
           LRS++R +QY+  CN
Sbjct: 103 LRSVQRRVQYVSYCN 117


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 564,716
Number of Sequences: 2352
Number of extensions: 11058
Number of successful extensions: 21
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 48628785
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)