Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021320
         (528 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT012460-1|AAS93731.1|  359|Drosophila melanogaster RE51612p pro...    28   6.8  
AY128451-1|AAM75044.1|  360|Drosophila melanogaster LD44814p pro...    28   6.8  
AE014297-852|AAF54319.2|  345|Drosophila melanogaster CG11980-PA...    28   6.8  
AE014297-851|AAN13405.1|  358|Drosophila melanogaster CG11980-PB...    28   6.8  
AE014297-850|AAN13404.1|  359|Drosophila melanogaster CG11980-PC...    28   6.8  
AY180916-3|AAN87268.1|  994|Drosophila melanogaster ORF3 protein.      28   9.0  

>BT012460-1|AAS93731.1|  359|Drosophila melanogaster RE51612p
           protein.
          Length = 359

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = +3

Query: 282 NVIACTCMGSVHCCYEVRVMWTGCGSQKSLSTSREGLVAAFV 407
           NV+  +  G V+C Y  RV+ +    +K +  S E L  AF+
Sbjct: 110 NVVRLSSAGLVYCHYGERVIQSILQREKGIKLSPENLQTAFI 151


>AY128451-1|AAM75044.1|  360|Drosophila melanogaster LD44814p
           protein.
          Length = 360

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = +3

Query: 282 NVIACTCMGSVHCCYEVRVMWTGCGSQKSLSTSREGLVAAFV 407
           NV+  +  G V+C Y  RV+ +    +K +  S E L  AF+
Sbjct: 111 NVVRLSSAGLVYCHYGERVIQSILQREKGIKLSPENLQTAFI 152


>AE014297-852|AAF54319.2|  345|Drosophila melanogaster CG11980-PA,
           isoform A protein.
          Length = 345

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = +3

Query: 282 NVIACTCMGSVHCCYEVRVMWTGCGSQKSLSTSREGLVAAFV 407
           NV+  +  G V+C Y  RV+ +    +K +  S E L  AF+
Sbjct: 96  NVVRLSSAGLVYCHYGERVIQSILQREKGIKLSPENLQTAFI 137


>AE014297-851|AAN13405.1|  358|Drosophila melanogaster CG11980-PB,
           isoform B protein.
          Length = 358

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = +3

Query: 282 NVIACTCMGSVHCCYEVRVMWTGCGSQKSLSTSREGLVAAFV 407
           NV+  +  G V+C Y  RV+ +    +K +  S E L  AF+
Sbjct: 109 NVVRLSSAGLVYCHYGERVIQSILQREKGIKLSPENLQTAFI 150


>AE014297-850|AAN13404.1|  359|Drosophila melanogaster CG11980-PC,
           isoform C protein.
          Length = 359

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = +3

Query: 282 NVIACTCMGSVHCCYEVRVMWTGCGSQKSLSTSREGLVAAFV 407
           NV+  +  G V+C Y  RV+ +    +K +  S E L  AF+
Sbjct: 110 NVVRLSSAGLVYCHYGERVIQSILQREKGIKLSPENLQTAFI 151


>AY180916-3|AAN87268.1|  994|Drosophila melanogaster ORF3 protein.
          Length = 994

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
 Frame = -2

Query: 350 SCPHHPHLIATVHRSHASASDYVQ--LSV*SSIW 255
           S  HH   + T+ RSH + ++Y++  +SV  S W
Sbjct: 813 SSAHHHQTLGTIERSHRTFNEYIRSYISVNKSDW 846


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,774,178
Number of Sequences: 53049
Number of extensions: 516065
Number of successful extensions: 1581
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1534
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1581
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1970722560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)