Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021318
         (682 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        25   0.76 
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    23   1.8  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      23   2.3  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      23   2.3  
AM712904-1|CAN84643.1|   86|Tribolium castaneum hypothetical pro...    23   2.3  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    22   4.0  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    22   4.0  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   9.3  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   9.3  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   9.3  

>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 24.6 bits (51), Expect = 0.76
 Identities = 15/49 (30%), Positives = 24/49 (48%)
 Frame = +3

Query: 333 NPLLTYSPDKENNLDIIHKLNDSAEVLDNGYVYEQTNDDRSSHTITDHR 479
           NP  ++S    +NL     LN+   +  +G  Y+ TND+  S   T H+
Sbjct: 345 NPYPSHSIYPSSNL---MPLNNIQNLSQSGINYKDTNDNNVSAVTTQHQ 390


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +1

Query: 130 NLKLHLEPKENCDEPLQLPP 189
           +L+  + P E+CD P  +PP
Sbjct: 196 SLRCVVPPTEDCDVPSTIPP 215


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 9/31 (29%), Positives = 13/31 (41%)
 Frame = -3

Query: 209 SNEFLMIGGSWRGSSQFSLGSRCNFKFKYPT 117
           S E   +  SW   S + L     F+  YP+
Sbjct: 178 SPEMSQVAASWHTPSMYPLSPGAGFRSPYPS 208


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 9/31 (29%), Positives = 13/31 (41%)
 Frame = -3

Query: 209 SNEFLMIGGSWRGSSQFSLGSRCNFKFKYPT 117
           S E   +  SW   S + L     F+  YP+
Sbjct: 70  SPEMSQVAASWHTPSMYPLSPGAGFRSPYPS 100


>AM712904-1|CAN84643.1|   86|Tribolium castaneum hypothetical
           protein protein.
          Length = 86

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 5/47 (10%)
 Frame = -1

Query: 469 VIVCDDLSSFVCSYT---YPL--SNTSALSFNLCIISKLFSLSGEYV 344
           +I+   +S FV  Y    +PL  SN +A+ FN    +  ++  G YV
Sbjct: 32  LIIAGCVSPFVIGYVKHFHPLALSNKNAIDFNYYYYAATYARFGPYV 78


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 12/52 (23%), Positives = 26/52 (50%)
 Frame = -3

Query: 242 LKTESLKSFK*SNEFLMIGGSWRGSSQFSLGSRCNFKFKYPTGATGSSECIT 87
           LK   L++    ++F+++G +W G++  S+     F  +     T   +C+T
Sbjct: 156 LKPLYLRALDRRDKFMLLG-AWLGATLCSIPQMVVFHVESHPNITWYQQCVT 206


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 12/52 (23%), Positives = 26/52 (50%)
 Frame = -3

Query: 242 LKTESLKSFK*SNEFLMIGGSWRGSSQFSLGSRCNFKFKYPTGATGSSECIT 87
           LK   L++    ++F+++G +W G++  S+     F  +     T   +C+T
Sbjct: 156 LKPLYLRALDRRDKFMLLG-AWLGATLCSIPQMVVFHVESHPNITWYQQCVT 206


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +2

Query: 584 LLDSESMHLTDVCSVNIIHEEPGRVCF 664
           LL + S+   D C+      EP R+C+
Sbjct: 96  LLKNPSLSSPDECARACREGEPPRICY 122


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +2

Query: 584 LLDSESMHLTDVCSVNIIHEEPGRVCF 664
           LL + S+   D C+      EP R+C+
Sbjct: 96  LLKNPSLSSPDECARACREGEPPRICY 122


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = -2

Query: 588 NKLINLFIASSV 553
           NKLINL +A SV
Sbjct: 200 NKLINLVVAPSV 211


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,074
Number of Sequences: 336
Number of extensions: 2566
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17801955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)