Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021318
         (682 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT021411-1|AAX33559.1|  901|Drosophila melanogaster LD05643p pro...    50   3e-06
AY119604-1|AAM50258.1|  901|Drosophila melanogaster LD28359p pro...    50   3e-06
AE014298-1693|AAF48097.3|  901|Drosophila melanogaster CG1578-PA...    50   3e-06

>BT021411-1|AAX33559.1|  901|Drosophila melanogaster LD05643p
           protein.
          Length = 901

 Score = 50.0 bits (114), Expect = 3e-06
 Identities = 25/62 (40%), Positives = 39/62 (62%), Gaps = 4/62 (6%)
 Frame = +1

Query: 82  EMVMHSDDPVAPVGYLNL-KLHLEPKENCDEPLQ---LPPIIKNSLDYLNDLSDSVFSDI 249
           + ++ S DP+ PVGY+N  KL L+PKE              +K SLDY++DL++S +SD+
Sbjct: 221 QTIISSADPICPVGYINFTKLTLQPKEAAGAASSGGNEVVFVKRSLDYISDLNESTYSDL 280

Query: 250 SE 255
           S+
Sbjct: 281 SD 282


>AY119604-1|AAM50258.1|  901|Drosophila melanogaster LD28359p
           protein.
          Length = 901

 Score = 50.0 bits (114), Expect = 3e-06
 Identities = 25/62 (40%), Positives = 39/62 (62%), Gaps = 4/62 (6%)
 Frame = +1

Query: 82  EMVMHSDDPVAPVGYLNL-KLHLEPKENCDEPLQ---LPPIIKNSLDYLNDLSDSVFSDI 249
           + ++ S DP+ PVGY+N  KL L+PKE              +K SLDY++DL++S +SD+
Sbjct: 221 QTIISSADPICPVGYINFTKLTLQPKEAAGAASSGGNEVVFVKRSLDYISDLNESTYSDL 280

Query: 250 SE 255
           S+
Sbjct: 281 SD 282


>AE014298-1693|AAF48097.3|  901|Drosophila melanogaster CG1578-PA
           protein.
          Length = 901

 Score = 50.0 bits (114), Expect = 3e-06
 Identities = 25/62 (40%), Positives = 39/62 (62%), Gaps = 4/62 (6%)
 Frame = +1

Query: 82  EMVMHSDDPVAPVGYLNL-KLHLEPKENCDEPLQ---LPPIIKNSLDYLNDLSDSVFSDI 249
           + ++ S DP+ PVGY+N  KL L+PKE              +K SLDY++DL++S +SD+
Sbjct: 221 QTIISSADPICPVGYINFTKLTLQPKEAAGAASSGGNEVVFVKRSLDYISDLNESTYSDL 280

Query: 250 SE 255
           S+
Sbjct: 281 SD 282


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,401,138
Number of Sequences: 53049
Number of extensions: 476190
Number of successful extensions: 1593
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1539
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1590
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2971922400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)