Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021317
         (669 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    23   2.3  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   3.0  
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    22   5.2  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   9.1  
L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protei...    21   9.1  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    21   9.1  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    21   9.1  

>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -3

Query: 238 PLRRFVCRRCTCERKQSYQSL 176
           P R+F+C+ C  +  +SY  L
Sbjct: 76  PKRQFICKYCNRQFTKSYNLL 96


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 11/33 (33%), Positives = 15/33 (45%)
 Frame = +1

Query: 61  MIRTSSHVLNVQENIMTSNCASSPYSCEATSAC 159
           M++     LNVQ   +T NCA+   S      C
Sbjct: 547 MLKNRFVTLNVQLTKLTKNCATKAQSVVLGRIC 579


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = +1

Query: 100 NIMTSNCASSPYSCEATSACAEAQQVMID 186
           +I++   A   +S  A+ AC E + VM+D
Sbjct: 92  DILSGAIACIGFSWIASPACTELEVVMLD 120


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 8/28 (28%), Positives = 11/28 (39%)
 Frame = -3

Query: 613 NRQFDINSFTYICIEFIFLKQHAKEFLN 530
           ++ F  N   Y C+    L  H K   N
Sbjct: 256 SKPFQCNKCDYTCVNKSMLNSHMKSHSN 283


>L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protein
           protein.
          Length = 69

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 8/28 (28%), Positives = 11/28 (39%)
 Frame = -3

Query: 613 NRQFDINSFTYICIEFIFLKQHAKEFLN 530
           ++ F  N   Y C+    L  H K   N
Sbjct: 14  SKPFQCNKCDYTCVNKSMLNSHMKSHSN 41


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -1

Query: 321 IYSLFYTCTF 292
           I+ LFY CTF
Sbjct: 20  IHPLFYVCTF 29


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -1

Query: 321 IYSLFYTCTF 292
           I+ LFY CTF
Sbjct: 20  IHPLFYVCTF 29


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,483
Number of Sequences: 336
Number of extensions: 3429
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17385535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)