Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021315
(656 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49886-1|CAA90050.1| 809|Caenorhabditis elegans Hypothetical pr... 122 2e-28
Z48334-9|CAA88314.1| 810|Caenorhabditis elegans Hypothetical pr... 112 2e-25
Z48045-12|CAA88105.1| 810|Caenorhabditis elegans Hypothetical p... 112 2e-25
Z92825-6|CAB07314.2| 435|Caenorhabditis elegans Hypothetical pr... 31 0.95
AC025715-2|AAK68447.2| 439|Caenorhabditis elegans Hypothetical ... 27 8.9
>Z49886-1|CAA90050.1| 809|Caenorhabditis elegans Hypothetical
protein C06A1.1 protein.
Length = 809
Score = 122 bits (294), Expect = 2e-28
Identities = 51/95 (53%), Positives = 69/95 (72%)
Frame = +1
Query: 250 LAKGKRRKETVCIVXSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHIL 429
+ KGK+RKE+V I+ SD++CP+EK+RM DVVSI P P++ YG R+H+L
Sbjct: 64 ILKGKKRKESVAIIVSDESCPNEKVRMNRVVRNNLRIRLGDVVSITPAPNLSYGTRIHVL 123
Query: 430 PIDDSVEGLTGNLFEVYLKPYFHGGLRPIHRDDTF 534
PIDD++EGLTGNLF+V+LKPYF RP+H+ D F
Sbjct: 124 PIDDTIEGLTGNLFDVFLKPYFLEAYRPLHKGDIF 158
Score = 71.7 bits (168), Expect = 4e-13
Identities = 33/60 (55%), Positives = 47/60 (78%)
Frame = +2
Query: 107 DDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLPRANAARKPFA 286
D+LSTAIL+ K +PNRLIV+++ DDNSV+A+SQAKM++L LFRGD V+ + ++ A
Sbjct: 16 DELSTAILKDKVKPNRLIVDQSEQDDNSVIAVSQAKMDELGLFRGDAVILKGKKRKESVA 75
Score = 42.7 bits (96), Expect = 2e-04
Identities = 24/54 (44%), Positives = 31/54 (57%)
Frame = +2
Query: 494 FMEAYVRSIVTTPSWVRGGMRAVEFQVVETDPSPFCIVALIPXYTVTVEPIKRE 655
F+EAY V+ MR VEF+VVET+P+P CIV+ +PIKRE
Sbjct: 145 FLEAYRPLHKGDIFTVQAAMRTVEFKVVETEPAPACIVSPDTMIHYEGDPIKRE 198
>Z48334-9|CAA88314.1| 810|Caenorhabditis elegans Hypothetical
protein C41C4.8 protein.
Length = 810
Score = 112 bits (270), Expect = 2e-25
Identities = 50/95 (52%), Positives = 68/95 (71%)
Frame = +1
Query: 250 LAKGKRRKETVCIVXSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHIL 429
+ KGK+R+ETV IV + DNCP++KI+M DVVSI+ ++YGKRVH+L
Sbjct: 64 ILKGKKRRETVSIVLNADNCPNDKIKMNKVVRNNLRSRLGDVVSISSA-QLEYGKRVHVL 122
Query: 430 PIDDSVEGLTGNLFEVYLKPYFHGGLRPIHRDDTF 534
PIDD++EGLTGNLF+V+L+PYF RP+H+ D F
Sbjct: 123 PIDDTIEGLTGNLFDVFLRPYFTDAYRPVHKGDIF 157
Score = 71.3 bits (167), Expect = 5e-13
Identities = 32/57 (56%), Positives = 47/57 (82%)
Frame = +2
Query: 107 DDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLPRANAARK 277
D+L+TAIL+ K RPNRLI++++ +DDNS+V LSQAKM++L LFRGD+V+ + R+
Sbjct: 16 DELATAILKDKKRPNRLIIDQSDNDDNSMVMLSQAKMDELGLFRGDSVILKGKKRRE 72
Score = 44.8 bits (101), Expect = 5e-05
Identities = 22/39 (56%), Positives = 26/39 (66%)
Frame = +2
Query: 539 VRGGMRAVEFQVVETDPSPFCIVALIPXYTVTVEPIKRE 655
V+ MR VEF+VVETDP+P CIVA +PIKRE
Sbjct: 159 VQAAMRTVEFKVVETDPAPACIVAPDTVIHYEGDPIKRE 197
>Z48045-12|CAA88105.1| 810|Caenorhabditis elegans Hypothetical
protein C41C4.8 protein.
Length = 810
Score = 112 bits (270), Expect = 2e-25
Identities = 50/95 (52%), Positives = 68/95 (71%)
Frame = +1
Query: 250 LAKGKRRKETVCIVXSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHIL 429
+ KGK+R+ETV IV + DNCP++KI+M DVVSI+ ++YGKRVH+L
Sbjct: 64 ILKGKKRRETVSIVLNADNCPNDKIKMNKVVRNNLRSRLGDVVSISSA-QLEYGKRVHVL 122
Query: 430 PIDDSVEGLTGNLFEVYLKPYFHGGLRPIHRDDTF 534
PIDD++EGLTGNLF+V+L+PYF RP+H+ D F
Sbjct: 123 PIDDTIEGLTGNLFDVFLRPYFTDAYRPVHKGDIF 157
Score = 71.3 bits (167), Expect = 5e-13
Identities = 32/57 (56%), Positives = 47/57 (82%)
Frame = +2
Query: 107 DDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLPRANAARK 277
D+L+TAIL+ K RPNRLI++++ +DDNS+V LSQAKM++L LFRGD+V+ + R+
Sbjct: 16 DELATAILKDKKRPNRLIIDQSDNDDNSMVMLSQAKMDELGLFRGDSVILKGKKRRE 72
Score = 44.8 bits (101), Expect = 5e-05
Identities = 22/39 (56%), Positives = 26/39 (66%)
Frame = +2
Query: 539 VRGGMRAVEFQVVETDPSPFCIVALIPXYTVTVEPIKRE 655
V+ MR VEF+VVETDP+P CIVA +PIKRE
Sbjct: 159 VQAAMRTVEFKVVETDPAPACIVAPDTVIHYEGDPIKRE 197
>Z92825-6|CAB07314.2| 435|Caenorhabditis elegans Hypothetical
protein C13C4.3 protein.
Length = 435
Score = 30.7 bits (66), Expect = 0.95
Identities = 14/36 (38%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Frame = +1
Query: 424 ILPIDDSVEGLTGNL--FEVYLKPYFHGGLRPIHRD 525
I+ +D V+G+ G L E+ ++P + GGL P +RD
Sbjct: 160 IMSFEDKVQGIIGKLTVMELKIEPLYTGGLPPGNRD 195
>AC025715-2|AAK68447.2| 439|Caenorhabditis elegans Hypothetical
protein Y38F2AR.6 protein.
Length = 439
Score = 27.5 bits (58), Expect = 8.9
Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = -1
Query: 218 PFWPVKVPRLSCHR*LLLRQ*DGWVCPCDGGSRS--INHQGFIICH 87
P +P ++ + S + LL Q G+V D RS INHQ IICH
Sbjct: 290 PNFPFQIDKKSVMKCLLALQTKGFVRLFDTTVRSDNINHQIQIICH 335
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,641,601
Number of Sequences: 27780
Number of extensions: 331649
Number of successful extensions: 804
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 744
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 802
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1465835342
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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