BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= NV021308 (552 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z75530-3|CAA99793.1| 702|Caenorhabditis elegans Hypothetical pr... 69 2e-12 Z68751-3|CAA92973.1| 760|Caenorhabditis elegans Hypothetical pr... 50 8e-07 U00036-14|ABC71802.1| 672|Caenorhabditis elegans Hypothetical p... 37 0.008 U00036-13|ABC71803.1| 479|Caenorhabditis elegans Hypothetical p... 37 0.008 AF143150-1|AAD37916.1| 222|Caenorhabditis elegans heat shock pr... 37 0.008 AL033514-22|CAA22106.3| 1353|Caenorhabditis elegans Hypothetical... 29 2.9 AF183401-1|AAF13189.1| 1353|Caenorhabditis elegans TIM-1 protein. 29 2.9 U88170-4|AAB42245.2| 425|Caenorhabditis elegans Hypothetical pr... 28 3.9 AC024876-11|AAF60895.1| 365|Caenorhabditis elegans Hypothetical... 28 3.9 Z81476-2|CAB03918.1| 1469|Caenorhabditis elegans Hypothetical pr... 28 5.1 AL031630-21|CAA20997.2| 736|Caenorhabditis elegans Hypothetical... 28 5.1 Z74038-6|CAA98496.1| 423|Caenorhabditis elegans Hypothetical pr... 27 9.0 >Z75530-3|CAA99793.1| 702|Caenorhabditis elegans Hypothetical protein C47E8.5 protein. Length = 702 Score = 69.3 bits (162), Expect = 2e-12 Identities = 58/154 (37%), Positives = 78/154 (50%), Gaps = 8/154 (5%) Frame = +2 Query: 89 ASGGETFAFQAEIAQLCP*SSTPFTPT-----RNFPS*ADFQFIGRFRQNQV*ISHGSVK 253 + ETFAFQAEIAQL F R S A + + R ++ S + Sbjct: 2 SENAETFAFQAEIAQLMSLIINTFYSNKEIYLRELISNAS-DALDKIRYQA--LTEPS-E 57 Query: 254 IDSGKELYIKIIPNKT-RALLRSSIRFGMTKADLVN-IWEPSRNLVLKLSWRLSSRCRHQ 427 +D+GKEL+IKI PNK + L GMTKADLVN + +++ L + Sbjct: 58 LDTGKELFIKITPNKEEKTLTIMDTGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADIS 117 Query: 428 HDXQFGVGFYSSYLVADRVTVT-LNT*REQYVWD 526 QFGVGFYS++LVAD+V VT N + Y W+ Sbjct: 118 MIGQFGVGFYSAFLVADKVVVTSKNNDDDSYQWE 151 Score = 54.8 bits (126), Expect = 4e-08 Identities = 37/92 (40%), Positives = 51/92 (55%), Gaps = 3/92 (3%) Frame = +3 Query: 168 QEIFLRELISNSSDALDKIRYESLTDPSKSIVAKSCTSRSFPTRRGHS---YDHRSGLV* 338 +EI+LRELISN+SDALDKIRY++LT+PS+ K + P + + D G+ Sbjct: 29 KEIYLRELISNASDALDKIRYQALTEPSELDTGKELFIKITPNKEEKTLTIMDTGIGMT- 87 Query: 339 PRPIW*TFGNHREIWY*SFHGGSQAGADISMI 434 + G + +F QAGADISMI Sbjct: 88 KADLVNNLGTIAKSGTKAFMEALQAGADISMI 119 Score = 46.8 bits (106), Expect = 1e-05 Identities = 39/101 (38%), Positives = 53/101 (52%), Gaps = 9/101 (8%) Frame = +1 Query: 136 MSLIINTFYSNKKFSFVS*FPIHRTL*TKSGMNLSRIRQNR*WQRAVHQDHSQ------- 294 MSLIINTFYSNK+ R L + + L +IR + + + Sbjct: 18 MSLIINTFYSNKEIYL-------RELISNASDALDKIRYQALTEPSELDTGKELFIKITP 70 Query: 295 -QDEGTLTIIDP-VWYDQGRFGEHLGTIAKSGTKAFMEALK 411 ++E TLTI+D + + +LGTIAKSGTKAFMEAL+ Sbjct: 71 NKEEKTLTIMDTGIGMTKADLVNNLGTIAKSGTKAFMEALQ 111 >Z68751-3|CAA92973.1| 760|Caenorhabditis elegans Hypothetical protein T05E11.3 protein. Length = 760 Score = 50.4 bits (115), Expect = 8e-07 Identities = 36/102 (35%), Positives = 53/102 (51%), Gaps = 8/102 (7%) Frame = +2 Query: 266 KELYIKIIPNKTRALLR-SSIRFGMTKADLVN----IWEPSRNLVLKLSWRLSSRCRHQH 430 +E+ +KI ++ LL + GMT+ DL+N I + L ++ Q Sbjct: 118 EEMSVKIKADRENRLLHITDTGVGMTRQDLINNLGTIARSGTSEFLSKLMDTATSSDQQQ 177 Query: 431 DX--QFGVGFYSSYLVADRVTVTL-NT*REQYVWDLLRRLFT 547 D QFGVGFY+++LVADRV VT N +QY+W+ FT Sbjct: 178 DLIGQFGVGFYAAFLVADRVVVTTKNNDDDQYIWESDSASFT 219 Score = 48.8 bits (111), Expect = 3e-06 Identities = 24/33 (72%), Positives = 27/33 (81%) Frame = +3 Query: 156 LLLQQEIFLRELISNSSDALDKIRYESLTDPSK 254 L +EIFLRELISN+SDALDKIR SLTDP + Sbjct: 81 LYRNKEIFLRELISNASDALDKIRLLSLTDPEQ 113 >U00036-14|ABC71802.1| 672|Caenorhabditis elegans Hypothetical protein R151.7a protein. Length = 672 Score = 37.1 bits (82), Expect = 0.008 Identities = 17/28 (60%), Positives = 21/28 (75%) Frame = +3 Query: 156 LLLQQEIFLRELISNSSDALDKIRYESL 239 L E+F+RELISN+SDAL+K RY L Sbjct: 62 LYSHSEVFVRELISNASDALEKRRYAEL 89 Score = 34.7 bits (76), Expect = 0.045 Identities = 14/19 (73%), Positives = 17/19 (89%) Frame = +2 Query: 437 QFGVGFYSSYLVADRVTVT 493 QFGVGFYS+++VAD V VT Sbjct: 154 QFGVGFYSAFMVADSVVVT 172 Score = 28.7 bits (61), Expect = 2.9 Identities = 16/43 (37%), Positives = 27/43 (62%), Gaps = 1/43 (2%) Frame = +1 Query: 289 SQQDEGTLTIIDP-VWYDQGRFGEHLGTIAKSGTKAFMEALKQ 414 + +D+ T+T D + ++ + LGTIAKSG+K F+E K+ Sbjct: 104 TNKDKRTITFEDTGIGMNREDLVKFLGTIAKSGSKDFIENNKE 146 >U00036-13|ABC71803.1| 479|Caenorhabditis elegans Hypothetical protein R151.7b protein. Length = 479 Score = 37.1 bits (82), Expect = 0.008 Identities = 17/28 (60%), Positives = 21/28 (75%) Frame = +3 Query: 156 LLLQQEIFLRELISNSSDALDKIRYESL 239 L E+F+RELISN+SDAL+K RY L Sbjct: 62 LYSHSEVFVRELISNASDALEKRRYAEL 89 Score = 34.7 bits (76), Expect = 0.045 Identities = 14/19 (73%), Positives = 17/19 (89%) Frame = +2 Query: 437 QFGVGFYSSYLVADRVTVT 493 QFGVGFYS+++VAD V VT Sbjct: 154 QFGVGFYSAFMVADSVVVT 172 Score = 28.7 bits (61), Expect = 2.9 Identities = 16/43 (37%), Positives = 27/43 (62%), Gaps = 1/43 (2%) Frame = +1 Query: 289 SQQDEGTLTIIDP-VWYDQGRFGEHLGTIAKSGTKAFMEALKQ 414 + +D+ T+T D + ++ + LGTIAKSG+K F+E K+ Sbjct: 104 TNKDKRTITFEDTGIGMNREDLVKFLGTIAKSGSKDFIENNKE 146 >AF143150-1|AAD37916.1| 222|Caenorhabditis elegans heat shock protein 75 protein. Length = 222 Score = 37.1 bits (82), Expect = 0.008 Identities = 17/28 (60%), Positives = 21/28 (75%) Frame = +3 Query: 156 LLLQQEIFLRELISNSSDALDKIRYESL 239 L E+F+RELISN+SDAL+K RY L Sbjct: 62 LYSHSEVFVRELISNASDALEKRRYAEL 89 Score = 34.7 bits (76), Expect = 0.045 Identities = 14/19 (73%), Positives = 17/19 (89%) Frame = +2 Query: 437 QFGVGFYSSYLVADRVTVT 493 QFGVGFYS+++VAD V VT Sbjct: 154 QFGVGFYSAFMVADSVVVT 172 Score = 28.7 bits (61), Expect = 2.9 Identities = 16/43 (37%), Positives = 27/43 (62%), Gaps = 1/43 (2%) Frame = +1 Query: 289 SQQDEGTLTIIDP-VWYDQGRFGEHLGTIAKSGTKAFMEALKQ 414 + +D+ T+T D + ++ + LGTIAKSG+K F+E K+ Sbjct: 104 TNKDKRTITFEDTGIGMNREDLVKFLGTIAKSGSKDFIENNKE 146 >AL033514-22|CAA22106.3| 1353|Caenorhabditis elegans Hypothetical protein Y75B8A.22 protein. Length = 1353 Score = 28.7 bits (61), Expect = 2.9 Identities = 11/21 (52%), Positives = 16/21 (76%) Frame = +2 Query: 332 GMTKADLVNIWEPSRNLVLKL 394 GM+K DL +WE S+ LVL++ Sbjct: 549 GMSKKDLDRLWEESKGLVLQI 569 >AF183401-1|AAF13189.1| 1353|Caenorhabditis elegans TIM-1 protein. Length = 1353 Score = 28.7 bits (61), Expect = 2.9 Identities = 11/21 (52%), Positives = 16/21 (76%) Frame = +2 Query: 332 GMTKADLVNIWEPSRNLVLKL 394 GM+K DL +WE S+ LVL++ Sbjct: 549 GMSKKDLDRLWEESKGLVLQI 569 >U88170-4|AAB42245.2| 425|Caenorhabditis elegans Hypothetical protein C10G11.6 protein. Length = 425 Score = 28.3 bits (60), Expect = 3.9 Identities = 12/36 (33%), Positives = 19/36 (52%) Frame = +1 Query: 274 VHQDHSQQDEGTLTIIDPVWYDQGRFGEHLGTIAKS 381 VH HS L DP+++D R+ +GT+ +S Sbjct: 49 VHSPHSSFTTENLRSSDPMFFDINRWKREVGTVIRS 84 >AC024876-11|AAF60895.1| 365|Caenorhabditis elegans Hypothetical protein Y94H6A.2 protein. Length = 365 Score = 28.3 bits (60), Expect = 3.9 Identities = 15/44 (34%), Positives = 23/44 (52%) Frame = +1 Query: 241 RIRQNR*WQRAVHQDHSQQDEGTLTIIDPVWYDQGRFGEHLGTI 372 +++ NR W QDHS D+G L++I V D E++ I Sbjct: 164 QLKMNR-WAEEYRQDHSYWDDGVLSLIHNV-QDNNEGSENIRNI 205 >Z81476-2|CAB03918.1| 1469|Caenorhabditis elegans Hypothetical protein C25F9.2 protein. Length = 1469 Score = 27.9 bits (59), Expect = 5.1 Identities = 13/48 (27%), Positives = 28/48 (58%), Gaps = 3/48 (6%) Frame = +3 Query: 96 EVKPSRSRLRSLSYVPD---HQHLLLQQEIFLRELISNSSDALDKIRY 230 +++ +R++ L + D HQHL +IF+R +I ++ +L + +Y Sbjct: 182 KLQDTRTKFTGLDKIKDEAIHQHLSRLIDIFIRSMIQKANGSLKETQY 229 >AL031630-21|CAA20997.2| 736|Caenorhabditis elegans Hypothetical protein Y38H6C.20 protein. Length = 736 Score = 27.9 bits (59), Expect = 5.1 Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 3/41 (7%) Frame = +1 Query: 262 WQRAVHQDHSQ--QDEGTLTIIDPVWYDQGRFGE-HLGTIA 375 W + Q+ Q DE +LTI + + +GRFG HLG ++ Sbjct: 367 WCKGNTQESDQFLMDENSLTIFEDIIIGKGRFGTVHLGQLS 407 >Z74038-6|CAA98496.1| 423|Caenorhabditis elegans Hypothetical protein F58B4.5 protein. Length = 423 Score = 27.1 bits (57), Expect = 9.0 Identities = 9/20 (45%), Positives = 14/20 (70%) Frame = -3 Query: 385 YQISRWFPNVHQIGLGHTKP 326 Y IS ++PN+H IG+ + P Sbjct: 153 YLISEYYPNIHHIGMHESIP 172 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 12,962,422 Number of Sequences: 27780 Number of extensions: 261345 Number of successful extensions: 672 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 654 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 667 length of database: 12,740,198 effective HSP length: 77 effective length of database: 10,601,138 effective search space used: 1123720628 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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