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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021308
         (552 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75530-3|CAA99793.1|  702|Caenorhabditis elegans Hypothetical pr...    69   2e-12
Z68751-3|CAA92973.1|  760|Caenorhabditis elegans Hypothetical pr...    50   8e-07
U00036-14|ABC71802.1|  672|Caenorhabditis elegans Hypothetical p...    37   0.008
U00036-13|ABC71803.1|  479|Caenorhabditis elegans Hypothetical p...    37   0.008
AF143150-1|AAD37916.1|  222|Caenorhabditis elegans heat shock pr...    37   0.008
AL033514-22|CAA22106.3| 1353|Caenorhabditis elegans Hypothetical...    29   2.9  
AF183401-1|AAF13189.1| 1353|Caenorhabditis elegans TIM-1 protein.      29   2.9  
U88170-4|AAB42245.2|  425|Caenorhabditis elegans Hypothetical pr...    28   3.9  
AC024876-11|AAF60895.1|  365|Caenorhabditis elegans Hypothetical...    28   3.9  
Z81476-2|CAB03918.1| 1469|Caenorhabditis elegans Hypothetical pr...    28   5.1  
AL031630-21|CAA20997.2|  736|Caenorhabditis elegans Hypothetical...    28   5.1  
Z74038-6|CAA98496.1|  423|Caenorhabditis elegans Hypothetical pr...    27   9.0  

>Z75530-3|CAA99793.1|  702|Caenorhabditis elegans Hypothetical
           protein C47E8.5 protein.
          Length = 702

 Score = 69.3 bits (162), Expect = 2e-12
 Identities = 58/154 (37%), Positives = 78/154 (50%), Gaps = 8/154 (5%)
 Frame = +2

Query: 89  ASGGETFAFQAEIAQLCP*SSTPFTPT-----RNFPS*ADFQFIGRFRQNQV*ISHGSVK 253
           +   ETFAFQAEIAQL       F        R   S A    + + R     ++  S +
Sbjct: 2   SENAETFAFQAEIAQLMSLIINTFYSNKEIYLRELISNAS-DALDKIRYQA--LTEPS-E 57

Query: 254 IDSGKELYIKIIPNKT-RALLRSSIRFGMTKADLVN-IWEPSRNLVLKLSWRLSSRCRHQ 427
           +D+GKEL+IKI PNK  + L       GMTKADLVN +   +++        L +     
Sbjct: 58  LDTGKELFIKITPNKEEKTLTIMDTGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADIS 117

Query: 428 HDXQFGVGFYSSYLVADRVTVT-LNT*REQYVWD 526
              QFGVGFYS++LVAD+V VT  N   + Y W+
Sbjct: 118 MIGQFGVGFYSAFLVADKVVVTSKNNDDDSYQWE 151



 Score = 54.8 bits (126), Expect = 4e-08
 Identities = 37/92 (40%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
 Frame = +3

Query: 168 QEIFLRELISNSSDALDKIRYESLTDPSKSIVAKSCTSRSFPTRRGHS---YDHRSGLV* 338
           +EI+LRELISN+SDALDKIRY++LT+PS+    K    +  P +   +    D   G+  
Sbjct: 29  KEIYLRELISNASDALDKIRYQALTEPSELDTGKELFIKITPNKEEKTLTIMDTGIGMT- 87

Query: 339 PRPIW*TFGNHREIWY*SFHGGSQAGADISMI 434
              +    G   +    +F    QAGADISMI
Sbjct: 88  KADLVNNLGTIAKSGTKAFMEALQAGADISMI 119



 Score = 46.8 bits (106), Expect = 1e-05
 Identities = 39/101 (38%), Positives = 53/101 (52%), Gaps = 9/101 (8%)
 Frame = +1

Query: 136 MSLIINTFYSNKKFSFVS*FPIHRTL*TKSGMNLSRIRQNR*WQRAVHQDHSQ------- 294
           MSLIINTFYSNK+          R L + +   L +IR     + +      +       
Sbjct: 18  MSLIINTFYSNKEIYL-------RELISNASDALDKIRYQALTEPSELDTGKELFIKITP 70

Query: 295 -QDEGTLTIIDP-VWYDQGRFGEHLGTIAKSGTKAFMEALK 411
            ++E TLTI+D  +   +     +LGTIAKSGTKAFMEAL+
Sbjct: 71  NKEEKTLTIMDTGIGMTKADLVNNLGTIAKSGTKAFMEALQ 111


>Z68751-3|CAA92973.1|  760|Caenorhabditis elegans Hypothetical
           protein T05E11.3 protein.
          Length = 760

 Score = 50.4 bits (115), Expect = 8e-07
 Identities = 36/102 (35%), Positives = 53/102 (51%), Gaps = 8/102 (7%)
 Frame = +2

Query: 266 KELYIKIIPNKTRALLR-SSIRFGMTKADLVN----IWEPSRNLVLKLSWRLSSRCRHQH 430
           +E+ +KI  ++   LL  +    GMT+ DL+N    I     +  L      ++    Q 
Sbjct: 118 EEMSVKIKADRENRLLHITDTGVGMTRQDLINNLGTIARSGTSEFLSKLMDTATSSDQQQ 177

Query: 431 DX--QFGVGFYSSYLVADRVTVTL-NT*REQYVWDLLRRLFT 547
           D   QFGVGFY+++LVADRV VT  N   +QY+W+     FT
Sbjct: 178 DLIGQFGVGFYAAFLVADRVVVTTKNNDDDQYIWESDSASFT 219



 Score = 48.8 bits (111), Expect = 3e-06
 Identities = 24/33 (72%), Positives = 27/33 (81%)
 Frame = +3

Query: 156 LLLQQEIFLRELISNSSDALDKIRYESLTDPSK 254
           L   +EIFLRELISN+SDALDKIR  SLTDP +
Sbjct: 81  LYRNKEIFLRELISNASDALDKIRLLSLTDPEQ 113


>U00036-14|ABC71802.1|  672|Caenorhabditis elegans Hypothetical
           protein R151.7a protein.
          Length = 672

 Score = 37.1 bits (82), Expect = 0.008
 Identities = 17/28 (60%), Positives = 21/28 (75%)
 Frame = +3

Query: 156 LLLQQEIFLRELISNSSDALDKIRYESL 239
           L    E+F+RELISN+SDAL+K RY  L
Sbjct: 62  LYSHSEVFVRELISNASDALEKRRYAEL 89



 Score = 34.7 bits (76), Expect = 0.045
 Identities = 14/19 (73%), Positives = 17/19 (89%)
 Frame = +2

Query: 437 QFGVGFYSSYLVADRVTVT 493
           QFGVGFYS+++VAD V VT
Sbjct: 154 QFGVGFYSAFMVADSVVVT 172



 Score = 28.7 bits (61), Expect = 2.9
 Identities = 16/43 (37%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
 Frame = +1

Query: 289 SQQDEGTLTIIDP-VWYDQGRFGEHLGTIAKSGTKAFMEALKQ 414
           + +D+ T+T  D  +  ++    + LGTIAKSG+K F+E  K+
Sbjct: 104 TNKDKRTITFEDTGIGMNREDLVKFLGTIAKSGSKDFIENNKE 146


>U00036-13|ABC71803.1|  479|Caenorhabditis elegans Hypothetical
           protein R151.7b protein.
          Length = 479

 Score = 37.1 bits (82), Expect = 0.008
 Identities = 17/28 (60%), Positives = 21/28 (75%)
 Frame = +3

Query: 156 LLLQQEIFLRELISNSSDALDKIRYESL 239
           L    E+F+RELISN+SDAL+K RY  L
Sbjct: 62  LYSHSEVFVRELISNASDALEKRRYAEL 89



 Score = 34.7 bits (76), Expect = 0.045
 Identities = 14/19 (73%), Positives = 17/19 (89%)
 Frame = +2

Query: 437 QFGVGFYSSYLVADRVTVT 493
           QFGVGFYS+++VAD V VT
Sbjct: 154 QFGVGFYSAFMVADSVVVT 172



 Score = 28.7 bits (61), Expect = 2.9
 Identities = 16/43 (37%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
 Frame = +1

Query: 289 SQQDEGTLTIIDP-VWYDQGRFGEHLGTIAKSGTKAFMEALKQ 414
           + +D+ T+T  D  +  ++    + LGTIAKSG+K F+E  K+
Sbjct: 104 TNKDKRTITFEDTGIGMNREDLVKFLGTIAKSGSKDFIENNKE 146


>AF143150-1|AAD37916.1|  222|Caenorhabditis elegans heat shock
           protein 75 protein.
          Length = 222

 Score = 37.1 bits (82), Expect = 0.008
 Identities = 17/28 (60%), Positives = 21/28 (75%)
 Frame = +3

Query: 156 LLLQQEIFLRELISNSSDALDKIRYESL 239
           L    E+F+RELISN+SDAL+K RY  L
Sbjct: 62  LYSHSEVFVRELISNASDALEKRRYAEL 89



 Score = 34.7 bits (76), Expect = 0.045
 Identities = 14/19 (73%), Positives = 17/19 (89%)
 Frame = +2

Query: 437 QFGVGFYSSYLVADRVTVT 493
           QFGVGFYS+++VAD V VT
Sbjct: 154 QFGVGFYSAFMVADSVVVT 172



 Score = 28.7 bits (61), Expect = 2.9
 Identities = 16/43 (37%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
 Frame = +1

Query: 289 SQQDEGTLTIIDP-VWYDQGRFGEHLGTIAKSGTKAFMEALKQ 414
           + +D+ T+T  D  +  ++    + LGTIAKSG+K F+E  K+
Sbjct: 104 TNKDKRTITFEDTGIGMNREDLVKFLGTIAKSGSKDFIENNKE 146


>AL033514-22|CAA22106.3| 1353|Caenorhabditis elegans Hypothetical
           protein Y75B8A.22 protein.
          Length = 1353

 Score = 28.7 bits (61), Expect = 2.9
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = +2

Query: 332 GMTKADLVNIWEPSRNLVLKL 394
           GM+K DL  +WE S+ LVL++
Sbjct: 549 GMSKKDLDRLWEESKGLVLQI 569


>AF183401-1|AAF13189.1| 1353|Caenorhabditis elegans TIM-1 protein.
          Length = 1353

 Score = 28.7 bits (61), Expect = 2.9
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = +2

Query: 332 GMTKADLVNIWEPSRNLVLKL 394
           GM+K DL  +WE S+ LVL++
Sbjct: 549 GMSKKDLDRLWEESKGLVLQI 569


>U88170-4|AAB42245.2|  425|Caenorhabditis elegans Hypothetical
           protein C10G11.6 protein.
          Length = 425

 Score = 28.3 bits (60), Expect = 3.9
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = +1

Query: 274 VHQDHSQQDEGTLTIIDPVWYDQGRFGEHLGTIAKS 381
           VH  HS      L   DP+++D  R+   +GT+ +S
Sbjct: 49  VHSPHSSFTTENLRSSDPMFFDINRWKREVGTVIRS 84


>AC024876-11|AAF60895.1|  365|Caenorhabditis elegans Hypothetical
           protein Y94H6A.2 protein.
          Length = 365

 Score = 28.3 bits (60), Expect = 3.9
 Identities = 15/44 (34%), Positives = 23/44 (52%)
 Frame = +1

Query: 241 RIRQNR*WQRAVHQDHSQQDEGTLTIIDPVWYDQGRFGEHLGTI 372
           +++ NR W     QDHS  D+G L++I  V  D     E++  I
Sbjct: 164 QLKMNR-WAEEYRQDHSYWDDGVLSLIHNV-QDNNEGSENIRNI 205


>Z81476-2|CAB03918.1| 1469|Caenorhabditis elegans Hypothetical
           protein C25F9.2 protein.
          Length = 1469

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 13/48 (27%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
 Frame = +3

Query: 96  EVKPSRSRLRSLSYVPD---HQHLLLQQEIFLRELISNSSDALDKIRY 230
           +++ +R++   L  + D   HQHL    +IF+R +I  ++ +L + +Y
Sbjct: 182 KLQDTRTKFTGLDKIKDEAIHQHLSRLIDIFIRSMIQKANGSLKETQY 229


>AL031630-21|CAA20997.2|  736|Caenorhabditis elegans Hypothetical
           protein Y38H6C.20 protein.
          Length = 736

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
 Frame = +1

Query: 262 WQRAVHQDHSQ--QDEGTLTIIDPVWYDQGRFGE-HLGTIA 375
           W +   Q+  Q   DE +LTI + +   +GRFG  HLG ++
Sbjct: 367 WCKGNTQESDQFLMDENSLTIFEDIIIGKGRFGTVHLGQLS 407


>Z74038-6|CAA98496.1|  423|Caenorhabditis elegans Hypothetical
           protein F58B4.5 protein.
          Length = 423

 Score = 27.1 bits (57), Expect = 9.0
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = -3

Query: 385 YQISRWFPNVHQIGLGHTKP 326
           Y IS ++PN+H IG+  + P
Sbjct: 153 YLISEYYPNIHHIGMHESIP 172


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,962,422
Number of Sequences: 27780
Number of extensions: 261345
Number of successful extensions: 672
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 654
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 667
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1123720628
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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