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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021308
         (552 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g56030.1 68418.m06991 heat shock protein 81-2 (HSP81-2) nearl...    68   4e-12
At5g56010.1 68418.m06989 heat shock protein, putative strong sim...    68   4e-12
At5g56000.1 68418.m06988 heat shock protein 81-4 (HSP81-4) nearl...    68   4e-12
At5g52640.1 68418.m06535 heat shock protein 81-1 (HSP81-1) / hea...    67   6e-12
At3g07770.1 68416.m00947 heat shock protein-related strong simil...    48   4e-06
At2g04030.2 68415.m00372 heat shock protein, putative strong sim...    47   7e-06
At2g04030.1 68415.m00371 heat shock protein, putative strong sim...    47   7e-06
At4g24190.2 68417.m03473 shepherd protein (SHD) / clavata format...    47   1e-05
At4g24190.1 68417.m03472 shepherd protein (SHD) / clavata format...    47   1e-05
At1g12150.1 68414.m01407 expressed protein contains Pfam profile...    29   1.6  
At2g24210.1 68415.m02892 myrcene/ocimene synthase (TPS10) nearly...    29   2.1  
At4g33990.1 68417.m04823 pentatricopeptide (PPR) repeat-containi...    29   2.7  
At1g49160.2 68414.m05512 protein kinase family protein contains ...    28   4.8  
At1g49160.1 68414.m05511 protein kinase family protein contains ...    28   4.8  
At5g23395.1 68418.m02738 expressed protein                             27   8.3  
At3g18770.1 68416.m02382 expressed protein                             27   8.3  
At1g35530.1 68414.m04411 DEAD/DEAH box helicase, putative low si...    27   8.3  

>At5g56030.1 68418.m06991 heat shock protein 81-2 (HSP81-2) nearly
           identical to SP|P55737 Heat shock protein 81-2 (HSP81-2)
           {Arabidopsis thaliana}
          Length = 699

 Score = 68.1 bits (159), Expect = 4e-12
 Identities = 56/146 (38%), Positives = 72/146 (49%), Gaps = 4/146 (2%)
 Frame = +2

Query: 101 ETFAFQAEIAQLCP*SSTPFTPTRN-FPS*ADFQFIGRFRQNQV*ISHGSVKIDSGKELY 277
           ETFAFQAEI QL       F   +  F             + +        K+D   EL+
Sbjct: 5   ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELF 64

Query: 278 IKIIPNKTRALLRS-SIRFGMTKADLVN-IWEPSRNLVLKLSWRLSSRCRHQHDXQFGVG 451
           I IIP+KT   L       GMTKADLVN +   +R+   +    L++        QFGVG
Sbjct: 65  IHIIPDKTNNTLTIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVSMIGQFGVG 124

Query: 452 FYSSYLVADRVTVTL-NT*REQYVWD 526
           FYS+YLVAD+V VT  +   EQYVW+
Sbjct: 125 FYSAYLVADKVVVTTKHNDDEQYVWE 150



 Score = 54.4 bits (125), Expect = 5e-08
 Identities = 26/29 (89%), Positives = 28/29 (96%)
 Frame = +3

Query: 168 QEIFLRELISNSSDALDKIRYESLTDPSK 254
           +EIFLRELISNSSDALDKIR+ESLTD SK
Sbjct: 28  KEIFLRELISNSSDALDKIRFESLTDKSK 56



 Score = 42.3 bits (95), Expect = 2e-04
 Identities = 37/100 (37%), Positives = 49/100 (49%), Gaps = 9/100 (9%)
 Frame = +1

Query: 136 MSLIINTFYSNKKFSFVS*FPIHRTL*TKSGMNLSRIRQNR*WQRAVHQDHSQ------- 294
           +SLIINTFYSNK+          R L + S   L +IR      ++      +       
Sbjct: 17  LSLIINTFYSNKEIFL-------RELISNSSDALDKIRFESLTDKSKLDGQPELFIHIIP 69

Query: 295 -QDEGTLTIIDP-VWYDQGRFGEHLGTIAKSGTKAFMEAL 408
            +   TLTIID  +   +     +LGTIA+SGTK FMEAL
Sbjct: 70  DKTNNTLTIIDSGIGMTKADLVNNLGTIARSGTKEFMEAL 109


>At5g56010.1 68418.m06989 heat shock protein, putative strong
           similarity to SP|P55737 Heat shock protein 81-2
           (HSP81-2) {Arabidopsis thaliana}; contains Pfam profiles
           PF02518: ATPase, histidine kinase-, DNA gyrase B-, and
           HSP90-like domain protein, PF00183: Hsp90 protein
          Length = 699

 Score = 68.1 bits (159), Expect = 4e-12
 Identities = 56/146 (38%), Positives = 72/146 (49%), Gaps = 4/146 (2%)
 Frame = +2

Query: 101 ETFAFQAEIAQLCP*SSTPFTPTRN-FPS*ADFQFIGRFRQNQV*ISHGSVKIDSGKELY 277
           ETFAFQAEI QL       F   +  F             + +        K+D   EL+
Sbjct: 5   ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELF 64

Query: 278 IKIIPNKTRALLRS-SIRFGMTKADLVN-IWEPSRNLVLKLSWRLSSRCRHQHDXQFGVG 451
           I IIP+KT   L       GMTKADLVN +   +R+   +    L++        QFGVG
Sbjct: 65  IHIIPDKTNNTLTIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVSMIGQFGVG 124

Query: 452 FYSSYLVADRVTVTL-NT*REQYVWD 526
           FYS+YLVAD+V VT  +   EQYVW+
Sbjct: 125 FYSAYLVADKVVVTTKHNDDEQYVWE 150



 Score = 54.4 bits (125), Expect = 5e-08
 Identities = 26/29 (89%), Positives = 28/29 (96%)
 Frame = +3

Query: 168 QEIFLRELISNSSDALDKIRYESLTDPSK 254
           +EIFLRELISNSSDALDKIR+ESLTD SK
Sbjct: 28  KEIFLRELISNSSDALDKIRFESLTDKSK 56



 Score = 42.3 bits (95), Expect = 2e-04
 Identities = 37/100 (37%), Positives = 49/100 (49%), Gaps = 9/100 (9%)
 Frame = +1

Query: 136 MSLIINTFYSNKKFSFVS*FPIHRTL*TKSGMNLSRIRQNR*WQRAVHQDHSQ------- 294
           +SLIINTFYSNK+          R L + S   L +IR      ++      +       
Sbjct: 17  LSLIINTFYSNKEIFL-------RELISNSSDALDKIRFESLTDKSKLDGQPELFIHIIP 69

Query: 295 -QDEGTLTIIDP-VWYDQGRFGEHLGTIAKSGTKAFMEAL 408
            +   TLTIID  +   +     +LGTIA+SGTK FMEAL
Sbjct: 70  DKTNNTLTIIDSGIGMTKADLVNNLGTIARSGTKEFMEAL 109


>At5g56000.1 68418.m06988 heat shock protein 81-4 (HSP81-4) nearly
           identical to heat shock protein hsp81.4 [Arabidopsis
           thaliana] GI:1906828; contains Pfam profiles PF02518:
           ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like
           domain protein, PF00183: Hsp90 protein
          Length = 699

 Score = 68.1 bits (159), Expect = 4e-12
 Identities = 56/146 (38%), Positives = 72/146 (49%), Gaps = 4/146 (2%)
 Frame = +2

Query: 101 ETFAFQAEIAQLCP*SSTPFTPTRN-FPS*ADFQFIGRFRQNQV*ISHGSVKIDSGKELY 277
           ETFAFQAEI QL       F   +  F             + +        K+D   EL+
Sbjct: 5   ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELF 64

Query: 278 IKIIPNKTRALLRS-SIRFGMTKADLVN-IWEPSRNLVLKLSWRLSSRCRHQHDXQFGVG 451
           I IIP+KT   L       GMTKADLVN +   +R+   +    L++        QFGVG
Sbjct: 65  IHIIPDKTNNTLTIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVSMIGQFGVG 124

Query: 452 FYSSYLVADRVTVTL-NT*REQYVWD 526
           FYS+YLVAD+V VT  +   EQYVW+
Sbjct: 125 FYSAYLVADKVVVTTKHNDDEQYVWE 150



 Score = 54.4 bits (125), Expect = 5e-08
 Identities = 26/29 (89%), Positives = 28/29 (96%)
 Frame = +3

Query: 168 QEIFLRELISNSSDALDKIRYESLTDPSK 254
           +EIFLRELISNSSDALDKIR+ESLTD SK
Sbjct: 28  KEIFLRELISNSSDALDKIRFESLTDKSK 56



 Score = 42.3 bits (95), Expect = 2e-04
 Identities = 37/100 (37%), Positives = 49/100 (49%), Gaps = 9/100 (9%)
 Frame = +1

Query: 136 MSLIINTFYSNKKFSFVS*FPIHRTL*TKSGMNLSRIRQNR*WQRAVHQDHSQ------- 294
           +SLIINTFYSNK+          R L + S   L +IR      ++      +       
Sbjct: 17  LSLIINTFYSNKEIFL-------RELISNSSDALDKIRFESLTDKSKLDGQPELFIHIIP 69

Query: 295 -QDEGTLTIIDP-VWYDQGRFGEHLGTIAKSGTKAFMEAL 408
            +   TLTIID  +   +     +LGTIA+SGTK FMEAL
Sbjct: 70  DKTNNTLTIIDSGIGMTKADLVNNLGTIARSGTKEFMEAL 109


>At5g52640.1 68418.m06535 heat shock protein 81-1 (HSP81-1) / heat
           shock protein 83 (HSP83) nearly identical to SP|P27323
           Heat shock protein 81-1 (HSP81-1) (Heat shock protein
           83) {Arabidopsis thaliana}; contains Pfam profiles
           PF02518: ATPase, histidine kinase-, DNA gyrase B-, and
           HSP90-like domain protein, PF00183: Hsp90 protein
          Length = 705

 Score = 67.3 bits (157), Expect = 6e-12
 Identities = 55/148 (37%), Positives = 76/148 (51%), Gaps = 6/148 (4%)
 Frame = +2

Query: 101 ETFAFQAEIAQLCP*SSTPFTPTRN-FPS*ADFQFIGRFRQNQV*ISHGSVKIDSGKELY 277
           ETFAFQAEI QL       F   +  F             + +        K+D   EL+
Sbjct: 10  ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELF 69

Query: 278 IKIIP---NKTRALLRSSIRFGMTKADLVN-IWEPSRNLVLKLSWRLSSRCRHQHDXQFG 445
           I+++P   NKT +++ S I  GMTKADLVN +   +R+   +    L +        QFG
Sbjct: 70  IRLVPDKSNKTLSIIDSGI--GMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFG 127

Query: 446 VGFYSSYLVADRVTVTL-NT*REQYVWD 526
           VGFYS+YLVA++V VT  +   EQYVW+
Sbjct: 128 VGFYSAYLVAEKVVVTTKHNDDEQYVWE 155



 Score = 54.8 bits (126), Expect = 4e-08
 Identities = 40/92 (43%), Positives = 47/92 (51%), Gaps = 3/92 (3%)
 Frame = +3

Query: 168 QEIFLRELISNSSDALDKIRYESLTDPSKSIVAKSCTSRSFPTRRGHS---YDHRSGLV* 338
           +EIFLRELISNSSDALDKIR+ESLTD SK         R  P +   +    D   G+  
Sbjct: 33  KEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRLVPDKSNKTLSIIDSGIGMT- 91

Query: 339 PRPIW*TFGNHREIWY*SFHGGSQAGADISMI 434
              +    G         F    QAGAD+SMI
Sbjct: 92  KADLVNNLGTIARSGTKEFMEALQAGADVSMI 123



 Score = 40.7 bits (91), Expect = 6e-04
 Identities = 36/101 (35%), Positives = 50/101 (49%), Gaps = 9/101 (8%)
 Frame = +1

Query: 136 MSLIINTFYSNKKFSFVS*FPIHRTL*TKSGMNLSRIRQNR*WQRAVHQDHSQ------- 294
           +SLIINTFYSNK+          R L + S   L +IR      ++      +       
Sbjct: 22  LSLIINTFYSNKEIFL-------RELISNSSDALDKIRFESLTDKSKLDGQPELFIRLVP 74

Query: 295 -QDEGTLTIIDP-VWYDQGRFGEHLGTIAKSGTKAFMEALK 411
            +   TL+IID  +   +     +LGTIA+SGTK FMEAL+
Sbjct: 75  DKSNKTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALQ 115


>At3g07770.1 68416.m00947 heat shock protein-related strong
           similarity to heat-shock protein [Secale cereale]
           GI:556673; contains Pfam profiles PF02518: ATPase,
           histidine kinase-, DNA gyrase B-, and HSP90-like domain
           protein, PF00183: Hsp90 protein
          Length = 803

 Score = 48.0 bits (109), Expect = 4e-06
 Identities = 22/34 (64%), Positives = 28/34 (82%)
 Frame = +3

Query: 156 LLLQQEIFLRELISNSSDALDKIRYESLTDPSKS 257
           L   +E+FLRELISN+SDALDK+RY S+T+P  S
Sbjct: 114 LYSNKEVFLRELISNASDALDKLRYLSVTNPELS 147



 Score = 41.9 bits (94), Expect = 3e-04
 Identities = 19/32 (59%), Positives = 26/32 (81%), Gaps = 2/32 (6%)
 Frame = +2

Query: 437 QFGVGFYSSYLVADRVTVTLNT*R--EQYVWD 526
           QFGVGFYS++LVADRV V+  + +  +QYVW+
Sbjct: 214 QFGVGFYSAFLVADRVIVSTKSPKSDKQYVWE 245



 Score = 32.7 bits (71), Expect = 0.17
 Identities = 29/101 (28%), Positives = 49/101 (48%), Gaps = 9/101 (8%)
 Frame = +1

Query: 136 MSLIINTFYSNKKFSFVS*FPIHRTL*TKSGMNLSRIRQNR*WQRAVHQD--------HS 291
           M LI+N+ YSNK+          R L + +   L ++R        + +D        ++
Sbjct: 107 MDLIVNSLYSNKEVFL-------RELISNASDALDKLRYLSVTNPELSKDAPDLDIRIYA 159

Query: 292 QQDEGTLTIIDP-VWYDQGRFGEHLGTIAKSGTKAFMEALK 411
            ++ G +T+ D  +   +    + LGTIA+SGT  FM+ALK
Sbjct: 160 DKENGIITLTDSGIGMTRQELVDCLGTIAQSGTAKFMKALK 200


>At2g04030.2 68415.m00372 heat shock protein, putative strong
           similarity to heat shock protein [Arabidopsis thaliana]
           GI:1906830; contains Pfam profiles PF02518: ATPase,
           histidine kinase-, DNA gyrase B-, and HSP90-like domain
           protein, PF00183: Hsp90 protein
          Length = 777

 Score = 47.2 bits (107), Expect = 7e-06
 Identities = 20/32 (62%), Positives = 28/32 (87%)
 Frame = +3

Query: 156 LLLQQEIFLRELISNSSDALDKIRYESLTDPS 251
           L   +E+FLREL+SN+SDALDK+R+ S+T+PS
Sbjct: 96  LYSHKEVFLRELVSNASDALDKLRFLSVTEPS 127



 Score = 41.1 bits (92), Expect = 5e-04
 Identities = 31/99 (31%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
 Frame = +2

Query: 254 IDSGKELYIKIIPNKTRALLR-SSIRFGMTKADLVN----IWEPSRNLVLK-LSWRLSSR 415
           +  G +L I+I P+     +  +    GMTK +L++    I +   +  LK L       
Sbjct: 129 LGDGGDLEIRIKPDPDNGTITITDTGIGMTKEELIDCLGTIAQSGTSKFLKALKENKDLG 188

Query: 416 CRHQHDXQFGVGFYSSYLVADRVTVTLNT*R--EQYVWD 526
             +    QFGVGFYS++LVA++V V+  + +  +QYVW+
Sbjct: 189 ADNGLIGQFGVGFYSAFLVAEKVVVSTKSPKSDKQYVWE 227


>At2g04030.1 68415.m00371 heat shock protein, putative strong
           similarity to heat shock protein [Arabidopsis thaliana]
           GI:1906830; contains Pfam profiles PF02518: ATPase,
           histidine kinase-, DNA gyrase B-, and HSP90-like domain
           protein, PF00183: Hsp90 protein
          Length = 780

 Score = 47.2 bits (107), Expect = 7e-06
 Identities = 20/32 (62%), Positives = 28/32 (87%)
 Frame = +3

Query: 156 LLLQQEIFLRELISNSSDALDKIRYESLTDPS 251
           L   +E+FLREL+SN+SDALDK+R+ S+T+PS
Sbjct: 96  LYSHKEVFLRELVSNASDALDKLRFLSVTEPS 127



 Score = 41.1 bits (92), Expect = 5e-04
 Identities = 31/99 (31%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
 Frame = +2

Query: 254 IDSGKELYIKIIPNKTRALLR-SSIRFGMTKADLVN----IWEPSRNLVLK-LSWRLSSR 415
           +  G +L I+I P+     +  +    GMTK +L++    I +   +  LK L       
Sbjct: 129 LGDGGDLEIRIKPDPDNGTITITDTGIGMTKEELIDCLGTIAQSGTSKFLKALKENKDLG 188

Query: 416 CRHQHDXQFGVGFYSSYLVADRVTVTLNT*R--EQYVWD 526
             +    QFGVGFYS++LVA++V V+  + +  +QYVW+
Sbjct: 189 ADNGLIGQFGVGFYSAFLVAEKVVVSTKSPKSDKQYVWE 227


>At4g24190.2 68417.m03473 shepherd protein (SHD) / clavata formation
           protein, putative nearly identical to SHEPHERD
           [Arabidopsis thaliana] GI:19570872; contains Pfam
           profiles PF02518: ATPase, histidine kinase-, DNA gyrase
           B-, and HSP90-like domain protein, PF00183: Hsp90
           protein
          Length = 823

 Score = 46.8 bits (106), Expect = 1e-05
 Identities = 30/74 (40%), Positives = 43/74 (58%)
 Frame = +3

Query: 63  KKTGEMETQPAEVKPSRSRLRSLSYVPDHQHLLLQQEIFLRELISNSSDALDKIRYESLT 242
           KKT     +  E +   SRL  +        L   ++IFLRELISN+SDALDKIR+ +LT
Sbjct: 69  KKTLRSNAEKFEFQAEVSRLMDIII----NSLYSNKDIFLRELISNASDALDKIRFLALT 124

Query: 243 DPSKSIVAKSCTSR 284
           D  K ++ +  T++
Sbjct: 125 D--KDVLGEGDTAK 136



 Score = 44.4 bits (100), Expect = 5e-05
 Identities = 31/89 (34%), Positives = 49/89 (55%), Gaps = 3/89 (3%)
 Frame = +2

Query: 269 ELYIKIIPNKTRALLRSSIR-FGMTKADLV-NIWEPSRNLVLKLSWRLSSRCRHQHDXQF 442
           +L I+I  +K + +L    R  GMTK DL+ N+   +++       ++ S        QF
Sbjct: 136 KLEIQIKLDKAKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQSSGDLNLIGQF 195

Query: 443 GVGFYSSYLVADRV-TVTLNT*REQYVWD 526
           GVGFYS+YLVAD +  ++ +    QYVW+
Sbjct: 196 GVGFYSAYLVADYIEVISKHNDDSQYVWE 224


>At4g24190.1 68417.m03472 shepherd protein (SHD) / clavata formation
           protein, putative nearly identical to SHEPHERD
           [Arabidopsis thaliana] GI:19570872; contains Pfam
           profiles PF02518: ATPase, histidine kinase-, DNA gyrase
           B-, and HSP90-like domain protein, PF00183: Hsp90
           protein
          Length = 823

 Score = 46.8 bits (106), Expect = 1e-05
 Identities = 30/74 (40%), Positives = 43/74 (58%)
 Frame = +3

Query: 63  KKTGEMETQPAEVKPSRSRLRSLSYVPDHQHLLLQQEIFLRELISNSSDALDKIRYESLT 242
           KKT     +  E +   SRL  +        L   ++IFLRELISN+SDALDKIR+ +LT
Sbjct: 69  KKTLRSNAEKFEFQAEVSRLMDIII----NSLYSNKDIFLRELISNASDALDKIRFLALT 124

Query: 243 DPSKSIVAKSCTSR 284
           D  K ++ +  T++
Sbjct: 125 D--KDVLGEGDTAK 136



 Score = 44.4 bits (100), Expect = 5e-05
 Identities = 31/89 (34%), Positives = 49/89 (55%), Gaps = 3/89 (3%)
 Frame = +2

Query: 269 ELYIKIIPNKTRALLRSSIR-FGMTKADLV-NIWEPSRNLVLKLSWRLSSRCRHQHDXQF 442
           +L I+I  +K + +L    R  GMTK DL+ N+   +++       ++ S        QF
Sbjct: 136 KLEIQIKLDKAKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQSSGDLNLIGQF 195

Query: 443 GVGFYSSYLVADRV-TVTLNT*REQYVWD 526
           GVGFYS+YLVAD +  ++ +    QYVW+
Sbjct: 196 GVGFYSAYLVADYIEVISKHNDDSQYVWE 224


>At1g12150.1 68414.m01407 expressed protein contains Pfam profile
           PF05701: Plant protein of unknown function (DUF827);
           expression supported by MPSS
          Length = 548

 Score = 29.5 bits (63), Expect = 1.6
 Identities = 25/80 (31%), Positives = 35/80 (43%)
 Frame = +3

Query: 18  IKTLSHFV*IKQKAVKKTGEMETQPAEVKPSRSRLRSLSYVPDHQHLLLQQEIFLRELIS 197
           I T + F  +K  AV   GE+        P RSRL S S       L+L  + F++  I 
Sbjct: 21  IDTRAPFQSVKA-AVSLFGEVAVSKQRSTPRRSRLSSESVCDKETQLMLVHKEFMK--IK 77

Query: 198 NSSDALDKIRYESLTDPSKS 257
              D  +  R  +L D SK+
Sbjct: 78  QKLDNAESTRSRALDDLSKA 97


>At2g24210.1 68415.m02892 myrcene/ocimene synthase (TPS10) nearly
           identical to GI:9957293; contains Pfam profile: PF01397
           terpene synthase family
          Length = 591

 Score = 29.1 bits (62), Expect = 2.1
 Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 4/63 (6%)
 Frame = +3

Query: 81  ETQPAEVKPSRSRLRSLSYVP---DHQHLLLQQEIFLRELISNSSDAL-DKIRYESLTDP 248
           ET P    P+  R RS +Y P   DH HLL  +  F ++      D L +K+R + L D 
Sbjct: 34  ETTPCNKSPTVQR-RSANYQPSRWDHHHLLSVENKFAKDKRVRERDLLKEKVR-KMLNDE 91

Query: 249 SKS 257
            K+
Sbjct: 92  QKT 94


>At4g33990.1 68417.m04823 pentatricopeptide (PPR) repeat-containing
           protein contains Pfam profile PF01535: PPR repeat
          Length = 823

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 15/56 (26%), Positives = 29/56 (51%)
 Frame = +3

Query: 96  EVKPSRSRLRSLSYVPDHQHLLLQQEIFLRELISNSSDALDKIRYESLTDPSKSIV 263
           E+   +++L+ + YVPDH+ +L   E   +E I  S      I +  +  P+K+ +
Sbjct: 719 ELTALQAKLKMIGYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFALIATPAKTTI 774


>At1g49160.2 68414.m05512 protein kinase family protein contains
           protein kinase domain, Pfam:PF00069
          Length = 557

 Score = 27.9 bits (59), Expect = 4.8
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = +2

Query: 53  KSSKENRRNGDTASGGETFAFQAEIAQLCP*SSTPFTPT 169
           +SSK+N +NG ++  GE+ +     +  CP S     PT
Sbjct: 453 QSSKDNHQNGASSQAGESISHSLS-SDYCPRSDDEANPT 490


>At1g49160.1 68414.m05511 protein kinase family protein contains
           protein kinase domain, Pfam:PF00069
          Length = 539

 Score = 27.9 bits (59), Expect = 4.8
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = +2

Query: 53  KSSKENRRNGDTASGGETFAFQAEIAQLCP*SSTPFTPT 169
           +SSK+N +NG ++  GE+ +     +  CP S     PT
Sbjct: 435 QSSKDNHQNGASSQAGESISHSLS-SDYCPRSDDEANPT 472


>At5g23395.1 68418.m02738 expressed protein
          Length = 162

 Score = 27.1 bits (57), Expect = 8.3
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = -3

Query: 523 PHVLLSSCV*SDSHAVSDQVTGVEANTE 440
           P V L SC+ ++  A S  VTG E  TE
Sbjct: 105 PFVALQSCINANPDAFSKSVTGDEKETE 132


>At3g18770.1 68416.m02382 expressed protein 
          Length = 625

 Score = 27.1 bits (57), Expect = 8.3
 Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 4/45 (8%)
 Frame = +2

Query: 56  SSKENRRNGDTASGGET----FAFQAEIAQLCP*SSTPFTPTRNF 178
           SS  NR N + + G +     F F A+   +   S TPF  +RNF
Sbjct: 2   SSSHNRSNNNNSEGAKAEQIIFEFFAKSLHIILESRTPFMSSRNF 46


>At1g35530.1 68414.m04411 DEAD/DEAH box helicase, putative low
            similarity to RNA helicase/RNAseIII CAF protein
            [Arabidopsis thaliana] GI:6102610; contains Pfam profiles
            PF00270: DEAD/DEAH box helicase, PF00271: Helicase
            conserved C-terminal domain
          Length = 1324

 Score = 27.1 bits (57), Expect = 8.3
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = -3

Query: 289  NDLDVQLFATIDFDGSVRDSYLILSKASDE 200
            +D D   FAT+DFD     + L+LSK   E
Sbjct: 1262 DDDDDAFFATLDFDAMEAQATLLLSKQRSE 1291


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,415,675
Number of Sequences: 28952
Number of extensions: 252350
Number of successful extensions: 691
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 636
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 672
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1043173136
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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