BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= NV021308 (552 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At5g56030.1 68418.m06991 heat shock protein 81-2 (HSP81-2) nearl... 68 4e-12 At5g56010.1 68418.m06989 heat shock protein, putative strong sim... 68 4e-12 At5g56000.1 68418.m06988 heat shock protein 81-4 (HSP81-4) nearl... 68 4e-12 At5g52640.1 68418.m06535 heat shock protein 81-1 (HSP81-1) / hea... 67 6e-12 At3g07770.1 68416.m00947 heat shock protein-related strong simil... 48 4e-06 At2g04030.2 68415.m00372 heat shock protein, putative strong sim... 47 7e-06 At2g04030.1 68415.m00371 heat shock protein, putative strong sim... 47 7e-06 At4g24190.2 68417.m03473 shepherd protein (SHD) / clavata format... 47 1e-05 At4g24190.1 68417.m03472 shepherd protein (SHD) / clavata format... 47 1e-05 At1g12150.1 68414.m01407 expressed protein contains Pfam profile... 29 1.6 At2g24210.1 68415.m02892 myrcene/ocimene synthase (TPS10) nearly... 29 2.1 At4g33990.1 68417.m04823 pentatricopeptide (PPR) repeat-containi... 29 2.7 At1g49160.2 68414.m05512 protein kinase family protein contains ... 28 4.8 At1g49160.1 68414.m05511 protein kinase family protein contains ... 28 4.8 At5g23395.1 68418.m02738 expressed protein 27 8.3 At3g18770.1 68416.m02382 expressed protein 27 8.3 At1g35530.1 68414.m04411 DEAD/DEAH box helicase, putative low si... 27 8.3 >At5g56030.1 68418.m06991 heat shock protein 81-2 (HSP81-2) nearly identical to SP|P55737 Heat shock protein 81-2 (HSP81-2) {Arabidopsis thaliana} Length = 699 Score = 68.1 bits (159), Expect = 4e-12 Identities = 56/146 (38%), Positives = 72/146 (49%), Gaps = 4/146 (2%) Frame = +2 Query: 101 ETFAFQAEIAQLCP*SSTPFTPTRN-FPS*ADFQFIGRFRQNQV*ISHGSVKIDSGKELY 277 ETFAFQAEI QL F + F + + K+D EL+ Sbjct: 5 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELF 64 Query: 278 IKIIPNKTRALLRS-SIRFGMTKADLVN-IWEPSRNLVLKLSWRLSSRCRHQHDXQFGVG 451 I IIP+KT L GMTKADLVN + +R+ + L++ QFGVG Sbjct: 65 IHIIPDKTNNTLTIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVSMIGQFGVG 124 Query: 452 FYSSYLVADRVTVTL-NT*REQYVWD 526 FYS+YLVAD+V VT + EQYVW+ Sbjct: 125 FYSAYLVADKVVVTTKHNDDEQYVWE 150 Score = 54.4 bits (125), Expect = 5e-08 Identities = 26/29 (89%), Positives = 28/29 (96%) Frame = +3 Query: 168 QEIFLRELISNSSDALDKIRYESLTDPSK 254 +EIFLRELISNSSDALDKIR+ESLTD SK Sbjct: 28 KEIFLRELISNSSDALDKIRFESLTDKSK 56 Score = 42.3 bits (95), Expect = 2e-04 Identities = 37/100 (37%), Positives = 49/100 (49%), Gaps = 9/100 (9%) Frame = +1 Query: 136 MSLIINTFYSNKKFSFVS*FPIHRTL*TKSGMNLSRIRQNR*WQRAVHQDHSQ------- 294 +SLIINTFYSNK+ R L + S L +IR ++ + Sbjct: 17 LSLIINTFYSNKEIFL-------RELISNSSDALDKIRFESLTDKSKLDGQPELFIHIIP 69 Query: 295 -QDEGTLTIIDP-VWYDQGRFGEHLGTIAKSGTKAFMEAL 408 + TLTIID + + +LGTIA+SGTK FMEAL Sbjct: 70 DKTNNTLTIIDSGIGMTKADLVNNLGTIARSGTKEFMEAL 109 >At5g56010.1 68418.m06989 heat shock protein, putative strong similarity to SP|P55737 Heat shock protein 81-2 (HSP81-2) {Arabidopsis thaliana}; contains Pfam profiles PF02518: ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein, PF00183: Hsp90 protein Length = 699 Score = 68.1 bits (159), Expect = 4e-12 Identities = 56/146 (38%), Positives = 72/146 (49%), Gaps = 4/146 (2%) Frame = +2 Query: 101 ETFAFQAEIAQLCP*SSTPFTPTRN-FPS*ADFQFIGRFRQNQV*ISHGSVKIDSGKELY 277 ETFAFQAEI QL F + F + + K+D EL+ Sbjct: 5 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELF 64 Query: 278 IKIIPNKTRALLRS-SIRFGMTKADLVN-IWEPSRNLVLKLSWRLSSRCRHQHDXQFGVG 451 I IIP+KT L GMTKADLVN + +R+ + L++ QFGVG Sbjct: 65 IHIIPDKTNNTLTIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVSMIGQFGVG 124 Query: 452 FYSSYLVADRVTVTL-NT*REQYVWD 526 FYS+YLVAD+V VT + EQYVW+ Sbjct: 125 FYSAYLVADKVVVTTKHNDDEQYVWE 150 Score = 54.4 bits (125), Expect = 5e-08 Identities = 26/29 (89%), Positives = 28/29 (96%) Frame = +3 Query: 168 QEIFLRELISNSSDALDKIRYESLTDPSK 254 +EIFLRELISNSSDALDKIR+ESLTD SK Sbjct: 28 KEIFLRELISNSSDALDKIRFESLTDKSK 56 Score = 42.3 bits (95), Expect = 2e-04 Identities = 37/100 (37%), Positives = 49/100 (49%), Gaps = 9/100 (9%) Frame = +1 Query: 136 MSLIINTFYSNKKFSFVS*FPIHRTL*TKSGMNLSRIRQNR*WQRAVHQDHSQ------- 294 +SLIINTFYSNK+ R L + S L +IR ++ + Sbjct: 17 LSLIINTFYSNKEIFL-------RELISNSSDALDKIRFESLTDKSKLDGQPELFIHIIP 69 Query: 295 -QDEGTLTIIDP-VWYDQGRFGEHLGTIAKSGTKAFMEAL 408 + TLTIID + + +LGTIA+SGTK FMEAL Sbjct: 70 DKTNNTLTIIDSGIGMTKADLVNNLGTIARSGTKEFMEAL 109 >At5g56000.1 68418.m06988 heat shock protein 81-4 (HSP81-4) nearly identical to heat shock protein hsp81.4 [Arabidopsis thaliana] GI:1906828; contains Pfam profiles PF02518: ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein, PF00183: Hsp90 protein Length = 699 Score = 68.1 bits (159), Expect = 4e-12 Identities = 56/146 (38%), Positives = 72/146 (49%), Gaps = 4/146 (2%) Frame = +2 Query: 101 ETFAFQAEIAQLCP*SSTPFTPTRN-FPS*ADFQFIGRFRQNQV*ISHGSVKIDSGKELY 277 ETFAFQAEI QL F + F + + K+D EL+ Sbjct: 5 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELF 64 Query: 278 IKIIPNKTRALLRS-SIRFGMTKADLVN-IWEPSRNLVLKLSWRLSSRCRHQHDXQFGVG 451 I IIP+KT L GMTKADLVN + +R+ + L++ QFGVG Sbjct: 65 IHIIPDKTNNTLTIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVSMIGQFGVG 124 Query: 452 FYSSYLVADRVTVTL-NT*REQYVWD 526 FYS+YLVAD+V VT + EQYVW+ Sbjct: 125 FYSAYLVADKVVVTTKHNDDEQYVWE 150 Score = 54.4 bits (125), Expect = 5e-08 Identities = 26/29 (89%), Positives = 28/29 (96%) Frame = +3 Query: 168 QEIFLRELISNSSDALDKIRYESLTDPSK 254 +EIFLRELISNSSDALDKIR+ESLTD SK Sbjct: 28 KEIFLRELISNSSDALDKIRFESLTDKSK 56 Score = 42.3 bits (95), Expect = 2e-04 Identities = 37/100 (37%), Positives = 49/100 (49%), Gaps = 9/100 (9%) Frame = +1 Query: 136 MSLIINTFYSNKKFSFVS*FPIHRTL*TKSGMNLSRIRQNR*WQRAVHQDHSQ------- 294 +SLIINTFYSNK+ R L + S L +IR ++ + Sbjct: 17 LSLIINTFYSNKEIFL-------RELISNSSDALDKIRFESLTDKSKLDGQPELFIHIIP 69 Query: 295 -QDEGTLTIIDP-VWYDQGRFGEHLGTIAKSGTKAFMEAL 408 + TLTIID + + +LGTIA+SGTK FMEAL Sbjct: 70 DKTNNTLTIIDSGIGMTKADLVNNLGTIARSGTKEFMEAL 109 >At5g52640.1 68418.m06535 heat shock protein 81-1 (HSP81-1) / heat shock protein 83 (HSP83) nearly identical to SP|P27323 Heat shock protein 81-1 (HSP81-1) (Heat shock protein 83) {Arabidopsis thaliana}; contains Pfam profiles PF02518: ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein, PF00183: Hsp90 protein Length = 705 Score = 67.3 bits (157), Expect = 6e-12 Identities = 55/148 (37%), Positives = 76/148 (51%), Gaps = 6/148 (4%) Frame = +2 Query: 101 ETFAFQAEIAQLCP*SSTPFTPTRN-FPS*ADFQFIGRFRQNQV*ISHGSVKIDSGKELY 277 ETFAFQAEI QL F + F + + K+D EL+ Sbjct: 10 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELF 69 Query: 278 IKIIP---NKTRALLRSSIRFGMTKADLVN-IWEPSRNLVLKLSWRLSSRCRHQHDXQFG 445 I+++P NKT +++ S I GMTKADLVN + +R+ + L + QFG Sbjct: 70 IRLVPDKSNKTLSIIDSGI--GMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFG 127 Query: 446 VGFYSSYLVADRVTVTL-NT*REQYVWD 526 VGFYS+YLVA++V VT + EQYVW+ Sbjct: 128 VGFYSAYLVAEKVVVTTKHNDDEQYVWE 155 Score = 54.8 bits (126), Expect = 4e-08 Identities = 40/92 (43%), Positives = 47/92 (51%), Gaps = 3/92 (3%) Frame = +3 Query: 168 QEIFLRELISNSSDALDKIRYESLTDPSKSIVAKSCTSRSFPTRRGHS---YDHRSGLV* 338 +EIFLRELISNSSDALDKIR+ESLTD SK R P + + D G+ Sbjct: 33 KEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRLVPDKSNKTLSIIDSGIGMT- 91 Query: 339 PRPIW*TFGNHREIWY*SFHGGSQAGADISMI 434 + G F QAGAD+SMI Sbjct: 92 KADLVNNLGTIARSGTKEFMEALQAGADVSMI 123 Score = 40.7 bits (91), Expect = 6e-04 Identities = 36/101 (35%), Positives = 50/101 (49%), Gaps = 9/101 (8%) Frame = +1 Query: 136 MSLIINTFYSNKKFSFVS*FPIHRTL*TKSGMNLSRIRQNR*WQRAVHQDHSQ------- 294 +SLIINTFYSNK+ R L + S L +IR ++ + Sbjct: 22 LSLIINTFYSNKEIFL-------RELISNSSDALDKIRFESLTDKSKLDGQPELFIRLVP 74 Query: 295 -QDEGTLTIIDP-VWYDQGRFGEHLGTIAKSGTKAFMEALK 411 + TL+IID + + +LGTIA+SGTK FMEAL+ Sbjct: 75 DKSNKTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALQ 115 >At3g07770.1 68416.m00947 heat shock protein-related strong similarity to heat-shock protein [Secale cereale] GI:556673; contains Pfam profiles PF02518: ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein, PF00183: Hsp90 protein Length = 803 Score = 48.0 bits (109), Expect = 4e-06 Identities = 22/34 (64%), Positives = 28/34 (82%) Frame = +3 Query: 156 LLLQQEIFLRELISNSSDALDKIRYESLTDPSKS 257 L +E+FLRELISN+SDALDK+RY S+T+P S Sbjct: 114 LYSNKEVFLRELISNASDALDKLRYLSVTNPELS 147 Score = 41.9 bits (94), Expect = 3e-04 Identities = 19/32 (59%), Positives = 26/32 (81%), Gaps = 2/32 (6%) Frame = +2 Query: 437 QFGVGFYSSYLVADRVTVTLNT*R--EQYVWD 526 QFGVGFYS++LVADRV V+ + + +QYVW+ Sbjct: 214 QFGVGFYSAFLVADRVIVSTKSPKSDKQYVWE 245 Score = 32.7 bits (71), Expect = 0.17 Identities = 29/101 (28%), Positives = 49/101 (48%), Gaps = 9/101 (8%) Frame = +1 Query: 136 MSLIINTFYSNKKFSFVS*FPIHRTL*TKSGMNLSRIRQNR*WQRAVHQD--------HS 291 M LI+N+ YSNK+ R L + + L ++R + +D ++ Sbjct: 107 MDLIVNSLYSNKEVFL-------RELISNASDALDKLRYLSVTNPELSKDAPDLDIRIYA 159 Query: 292 QQDEGTLTIIDP-VWYDQGRFGEHLGTIAKSGTKAFMEALK 411 ++ G +T+ D + + + LGTIA+SGT FM+ALK Sbjct: 160 DKENGIITLTDSGIGMTRQELVDCLGTIAQSGTAKFMKALK 200 >At2g04030.2 68415.m00372 heat shock protein, putative strong similarity to heat shock protein [Arabidopsis thaliana] GI:1906830; contains Pfam profiles PF02518: ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein, PF00183: Hsp90 protein Length = 777 Score = 47.2 bits (107), Expect = 7e-06 Identities = 20/32 (62%), Positives = 28/32 (87%) Frame = +3 Query: 156 LLLQQEIFLRELISNSSDALDKIRYESLTDPS 251 L +E+FLREL+SN+SDALDK+R+ S+T+PS Sbjct: 96 LYSHKEVFLRELVSNASDALDKLRFLSVTEPS 127 Score = 41.1 bits (92), Expect = 5e-04 Identities = 31/99 (31%), Positives = 52/99 (52%), Gaps = 8/99 (8%) Frame = +2 Query: 254 IDSGKELYIKIIPNKTRALLR-SSIRFGMTKADLVN----IWEPSRNLVLK-LSWRLSSR 415 + G +L I+I P+ + + GMTK +L++ I + + LK L Sbjct: 129 LGDGGDLEIRIKPDPDNGTITITDTGIGMTKEELIDCLGTIAQSGTSKFLKALKENKDLG 188 Query: 416 CRHQHDXQFGVGFYSSYLVADRVTVTLNT*R--EQYVWD 526 + QFGVGFYS++LVA++V V+ + + +QYVW+ Sbjct: 189 ADNGLIGQFGVGFYSAFLVAEKVVVSTKSPKSDKQYVWE 227 >At2g04030.1 68415.m00371 heat shock protein, putative strong similarity to heat shock protein [Arabidopsis thaliana] GI:1906830; contains Pfam profiles PF02518: ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein, PF00183: Hsp90 protein Length = 780 Score = 47.2 bits (107), Expect = 7e-06 Identities = 20/32 (62%), Positives = 28/32 (87%) Frame = +3 Query: 156 LLLQQEIFLRELISNSSDALDKIRYESLTDPS 251 L +E+FLREL+SN+SDALDK+R+ S+T+PS Sbjct: 96 LYSHKEVFLRELVSNASDALDKLRFLSVTEPS 127 Score = 41.1 bits (92), Expect = 5e-04 Identities = 31/99 (31%), Positives = 52/99 (52%), Gaps = 8/99 (8%) Frame = +2 Query: 254 IDSGKELYIKIIPNKTRALLR-SSIRFGMTKADLVN----IWEPSRNLVLK-LSWRLSSR 415 + G +L I+I P+ + + GMTK +L++ I + + LK L Sbjct: 129 LGDGGDLEIRIKPDPDNGTITITDTGIGMTKEELIDCLGTIAQSGTSKFLKALKENKDLG 188 Query: 416 CRHQHDXQFGVGFYSSYLVADRVTVTLNT*R--EQYVWD 526 + QFGVGFYS++LVA++V V+ + + +QYVW+ Sbjct: 189 ADNGLIGQFGVGFYSAFLVAEKVVVSTKSPKSDKQYVWE 227 >At4g24190.2 68417.m03473 shepherd protein (SHD) / clavata formation protein, putative nearly identical to SHEPHERD [Arabidopsis thaliana] GI:19570872; contains Pfam profiles PF02518: ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein, PF00183: Hsp90 protein Length = 823 Score = 46.8 bits (106), Expect = 1e-05 Identities = 30/74 (40%), Positives = 43/74 (58%) Frame = +3 Query: 63 KKTGEMETQPAEVKPSRSRLRSLSYVPDHQHLLLQQEIFLRELISNSSDALDKIRYESLT 242 KKT + E + SRL + L ++IFLRELISN+SDALDKIR+ +LT Sbjct: 69 KKTLRSNAEKFEFQAEVSRLMDIII----NSLYSNKDIFLRELISNASDALDKIRFLALT 124 Query: 243 DPSKSIVAKSCTSR 284 D K ++ + T++ Sbjct: 125 D--KDVLGEGDTAK 136 Score = 44.4 bits (100), Expect = 5e-05 Identities = 31/89 (34%), Positives = 49/89 (55%), Gaps = 3/89 (3%) Frame = +2 Query: 269 ELYIKIIPNKTRALLRSSIR-FGMTKADLV-NIWEPSRNLVLKLSWRLSSRCRHQHDXQF 442 +L I+I +K + +L R GMTK DL+ N+ +++ ++ S QF Sbjct: 136 KLEIQIKLDKAKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQSSGDLNLIGQF 195 Query: 443 GVGFYSSYLVADRV-TVTLNT*REQYVWD 526 GVGFYS+YLVAD + ++ + QYVW+ Sbjct: 196 GVGFYSAYLVADYIEVISKHNDDSQYVWE 224 >At4g24190.1 68417.m03472 shepherd protein (SHD) / clavata formation protein, putative nearly identical to SHEPHERD [Arabidopsis thaliana] GI:19570872; contains Pfam profiles PF02518: ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein, PF00183: Hsp90 protein Length = 823 Score = 46.8 bits (106), Expect = 1e-05 Identities = 30/74 (40%), Positives = 43/74 (58%) Frame = +3 Query: 63 KKTGEMETQPAEVKPSRSRLRSLSYVPDHQHLLLQQEIFLRELISNSSDALDKIRYESLT 242 KKT + E + SRL + L ++IFLRELISN+SDALDKIR+ +LT Sbjct: 69 KKTLRSNAEKFEFQAEVSRLMDIII----NSLYSNKDIFLRELISNASDALDKIRFLALT 124 Query: 243 DPSKSIVAKSCTSR 284 D K ++ + T++ Sbjct: 125 D--KDVLGEGDTAK 136 Score = 44.4 bits (100), Expect = 5e-05 Identities = 31/89 (34%), Positives = 49/89 (55%), Gaps = 3/89 (3%) Frame = +2 Query: 269 ELYIKIIPNKTRALLRSSIR-FGMTKADLV-NIWEPSRNLVLKLSWRLSSRCRHQHDXQF 442 +L I+I +K + +L R GMTK DL+ N+ +++ ++ S QF Sbjct: 136 KLEIQIKLDKAKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQSSGDLNLIGQF 195 Query: 443 GVGFYSSYLVADRV-TVTLNT*REQYVWD 526 GVGFYS+YLVAD + ++ + QYVW+ Sbjct: 196 GVGFYSAYLVADYIEVISKHNDDSQYVWE 224 >At1g12150.1 68414.m01407 expressed protein contains Pfam profile PF05701: Plant protein of unknown function (DUF827); expression supported by MPSS Length = 548 Score = 29.5 bits (63), Expect = 1.6 Identities = 25/80 (31%), Positives = 35/80 (43%) Frame = +3 Query: 18 IKTLSHFV*IKQKAVKKTGEMETQPAEVKPSRSRLRSLSYVPDHQHLLLQQEIFLRELIS 197 I T + F +K AV GE+ P RSRL S S L+L + F++ I Sbjct: 21 IDTRAPFQSVKA-AVSLFGEVAVSKQRSTPRRSRLSSESVCDKETQLMLVHKEFMK--IK 77 Query: 198 NSSDALDKIRYESLTDPSKS 257 D + R +L D SK+ Sbjct: 78 QKLDNAESTRSRALDDLSKA 97 >At2g24210.1 68415.m02892 myrcene/ocimene synthase (TPS10) nearly identical to GI:9957293; contains Pfam profile: PF01397 terpene synthase family Length = 591 Score = 29.1 bits (62), Expect = 2.1 Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 4/63 (6%) Frame = +3 Query: 81 ETQPAEVKPSRSRLRSLSYVP---DHQHLLLQQEIFLRELISNSSDAL-DKIRYESLTDP 248 ET P P+ R RS +Y P DH HLL + F ++ D L +K+R + L D Sbjct: 34 ETTPCNKSPTVQR-RSANYQPSRWDHHHLLSVENKFAKDKRVRERDLLKEKVR-KMLNDE 91 Query: 249 SKS 257 K+ Sbjct: 92 QKT 94 >At4g33990.1 68417.m04823 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat Length = 823 Score = 28.7 bits (61), Expect = 2.7 Identities = 15/56 (26%), Positives = 29/56 (51%) Frame = +3 Query: 96 EVKPSRSRLRSLSYVPDHQHLLLQQEIFLRELISNSSDALDKIRYESLTDPSKSIV 263 E+ +++L+ + YVPDH+ +L E +E I S I + + P+K+ + Sbjct: 719 ELTALQAKLKMIGYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFALIATPAKTTI 774 >At1g49160.2 68414.m05512 protein kinase family protein contains protein kinase domain, Pfam:PF00069 Length = 557 Score = 27.9 bits (59), Expect = 4.8 Identities = 13/39 (33%), Positives = 21/39 (53%) Frame = +2 Query: 53 KSSKENRRNGDTASGGETFAFQAEIAQLCP*SSTPFTPT 169 +SSK+N +NG ++ GE+ + + CP S PT Sbjct: 453 QSSKDNHQNGASSQAGESISHSLS-SDYCPRSDDEANPT 490 >At1g49160.1 68414.m05511 protein kinase family protein contains protein kinase domain, Pfam:PF00069 Length = 539 Score = 27.9 bits (59), Expect = 4.8 Identities = 13/39 (33%), Positives = 21/39 (53%) Frame = +2 Query: 53 KSSKENRRNGDTASGGETFAFQAEIAQLCP*SSTPFTPT 169 +SSK+N +NG ++ GE+ + + CP S PT Sbjct: 435 QSSKDNHQNGASSQAGESISHSLS-SDYCPRSDDEANPT 472 >At5g23395.1 68418.m02738 expressed protein Length = 162 Score = 27.1 bits (57), Expect = 8.3 Identities = 13/28 (46%), Positives = 16/28 (57%) Frame = -3 Query: 523 PHVLLSSCV*SDSHAVSDQVTGVEANTE 440 P V L SC+ ++ A S VTG E TE Sbjct: 105 PFVALQSCINANPDAFSKSVTGDEKETE 132 >At3g18770.1 68416.m02382 expressed protein Length = 625 Score = 27.1 bits (57), Expect = 8.3 Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 4/45 (8%) Frame = +2 Query: 56 SSKENRRNGDTASGGET----FAFQAEIAQLCP*SSTPFTPTRNF 178 SS NR N + + G + F F A+ + S TPF +RNF Sbjct: 2 SSSHNRSNNNNSEGAKAEQIIFEFFAKSLHIILESRTPFMSSRNF 46 >At1g35530.1 68414.m04411 DEAD/DEAH box helicase, putative low similarity to RNA helicase/RNAseIII CAF protein [Arabidopsis thaliana] GI:6102610; contains Pfam profiles PF00270: DEAD/DEAH box helicase, PF00271: Helicase conserved C-terminal domain Length = 1324 Score = 27.1 bits (57), Expect = 8.3 Identities = 13/30 (43%), Positives = 17/30 (56%) Frame = -3 Query: 289 NDLDVQLFATIDFDGSVRDSYLILSKASDE 200 +D D FAT+DFD + L+LSK E Sbjct: 1262 DDDDDAFFATLDFDAMEAQATLLLSKQRSE 1291 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 12,415,675 Number of Sequences: 28952 Number of extensions: 252350 Number of successful extensions: 691 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 636 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 672 length of database: 12,070,560 effective HSP length: 77 effective length of database: 9,841,256 effective search space used: 1043173136 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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