Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021307
         (533 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    23   1.7  
AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine 3-mon...    22   3.0  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    22   3.0  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    22   3.0  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   3.9  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    21   5.2  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    21   5.2  
DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.      21   6.8  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   9.0  

>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +1

Query: 334 TSASRSPPTKYKGIVMLRPYPKEQG 408
           +S S  PP    G +   PY KE+G
Sbjct: 302 SSISGVPPLSIDGALEAGPYSKEEG 326


>AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 290

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +2

Query: 140 VIPHPRVPQLPPRHIHL 190
           VIP    P++ P H+H+
Sbjct: 198 VIPPENGPKMTPNHLHI 214


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +2

Query: 140 VIPHPRVPQLPPRHIHL 190
           VIP    P++ P H+H+
Sbjct: 198 VIPPENGPKMTPNHLHI 214


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +2

Query: 140 VIPHPRVPQLPPRHIHL 190
           VIP    P++ P H+H+
Sbjct: 198 VIPPENGPKMTPNHLHI 214


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 11/44 (25%), Positives = 18/44 (40%)
 Frame = +3

Query: 291 RRSTHRVSMLLXVQHVSKQIAADQVQGYRDASSVSQGAGFFHSG 422
           R      S +   QH +  I+ +Q+  +R +     G G   SG
Sbjct: 489 RSLAEMTSHMQQTQHYTNIISQEQIISWRSSDDAKGGGGGSGSG 532


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +2

Query: 143 IPHPRVPQLPP 175
           +P P VP++PP
Sbjct: 206 VPKPTVPKIPP 216


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +2

Query: 143 IPHPRVPQLPP 175
           +P P VP++PP
Sbjct: 206 VPKPTVPKIPP 216


>DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.
          Length = 162

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 9/23 (39%), Positives = 12/23 (52%), Gaps = 2/23 (8%)
 Frame = +1

Query: 280 VSKTAVAPIECQC--CSXYSTSA 342
           +  T  AP+EC C  C+    SA
Sbjct: 115 IKVTTKAPLECMCRPCTGVEESA 137


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 20.6 bits (41), Expect = 9.0
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = -1

Query: 35  FYRSSAQWIS 6
           FYR  AQW S
Sbjct: 679 FYRQEAQWTS 688


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,396
Number of Sequences: 336
Number of extensions: 2718
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12992348
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)