Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021306
(649 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC003982-3|AAB95636.1| 362|Homo sapiens WUGSC:H_166H1.2 protein. 40 0.010
AB073212-1|BAB70469.1| 179|Homo sapiens Musashi1 protein. 40 0.010
AB072592-1|BAB69769.1| 181|Homo sapiens Musashi1 protein. 40 0.010
AB072591-1|BAB69768.1| 181|Homo sapiens Musashi1 protein. 40 0.010
AB072590-1|BAB69767.1| 180|Homo sapiens Musashi1 protein. 40 0.010
AB012851-1|BAA33962.1| 362|Homo sapiens Musashi protein. 40 0.010
BC017560-1|AAH17560.1| 151|Homo sapiens MSI2 protein protein. 36 0.094
BC001526-1|AAH01526.1| 328|Homo sapiens musashi homolog 2 (Dros... 36 0.094
AK093888-1|BAC04244.1| 251|Homo sapiens protein ( Homo sapiens ... 36 0.094
X79536-1|CAA56072.1| 320|Homo sapiens hnRNPcore protein A1 prot... 36 0.12
X12671-1|CAA31191.1| 320|Homo sapiens hnrnp a1 protein protein. 36 0.12
BC121133-1|AAI21134.1| 320|Homo sapiens heterogeneous nuclear r... 36 0.12
BC108266-1|AAI08267.1| 320|Homo sapiens heterogeneous nuclear r... 36 0.12
BC103707-1|AAI03708.1| 267|Homo sapiens HNRPA1 protein protein. 36 0.12
BC074502-1|AAH74502.1| 320|Homo sapiens heterogeneous nuclear r... 36 0.12
BC073162-1|AAH73162.1| 320|Homo sapiens heterogeneous nuclear r... 36 0.12
BC070315-1|AAH70315.1| 320|Homo sapiens HNRPA1 protein protein. 36 0.12
BC052296-1|AAH52296.1| 320|Homo sapiens heterogeneous nuclear r... 36 0.12
BC033714-1|AAH33714.1| 320|Homo sapiens heterogeneous nuclear r... 36 0.12
BC012158-1|AAH12158.1| 320|Homo sapiens heterogeneous nuclear r... 36 0.12
BC009600-1|AAH09600.1| 320|Homo sapiens heterogeneous nuclear r... 36 0.12
BC004945-1|AAH04945.1| 298|Homo sapiens Unknown (protein for IM... 36 0.12
BC002355-1|AAH02355.1| 320|Homo sapiens heterogeneous nuclear r... 36 0.12
AL137058-3|CAI16736.1| 320|Homo sapiens protein ( Human DNA seq... 36 0.12
S63912-1|AAB27595.1| 269|Homo sapiens FBRNP protein. 35 0.22
BC113470-1|AAI13471.1| 378|Homo sapiens LOC653115 protein protein. 35 0.29
BC112027-1|AAI12028.1| 378|Homo sapiens heterogeneous nuclear r... 35 0.29
AY363225-1|AAQ63629.1| 378|Homo sapiens heterogeneous nuclear r... 35 0.29
AC079305-1|AAY14709.1| 378|Homo sapiens unknown protein. 35 0.29
X06747-1|CAA29922.1| 320|Homo sapiens protein ( Human hnRNP cor... 34 0.38
U89505-1|AAC51293.1| 366|Homo sapiens Hlark protein. 34 0.38
BC071945-1|AAH71945.1| 320|Homo sapiens heterogeneous nuclear r... 34 0.38
BC064960-1|AAH64960.1| 143|Homo sapiens RBM4 protein protein. 34 0.38
BC032735-1|AAH32735.1| 364|Homo sapiens RNA binding motif prote... 34 0.38
BC021120-1|AAH21120.1| 177|Homo sapiens RBM4 protein protein. 34 0.38
BC004951-1|AAH04951.1| 359|Homo sapiens RNA binding motif prote... 34 0.38
BC003503-1|AAH03503.1| 359|Homo sapiens RNA binding motif prote... 34 0.38
BC000307-1|AAH00307.1| 364|Homo sapiens RNA binding motif prote... 34 0.38
Z48501-1|CAA88401.1| 522|Homo sapiens polyadenylate binding pro... 34 0.50
Y00345-1|CAA68428.1| 633|Homo sapiens protein ( Human mRNA for ... 34 0.50
U68104-1|AAD08718.1| 636|Homo sapiens poly(A)-binding protein p... 34 0.50
U09123-1|AAB60650.1| 341|Homo sapiens hnRNP protein A2 protein. 34 0.50
M29065-1|AAA36574.1| 341|Homo sapiens protein ( Human hnRNP A2 ... 34 0.50
M29064-1|AAA60271.1| 353|Homo sapiens SNRPB1 protein. 34 0.50
D28877-2|BAA06032.1| 341|Homo sapiens hnRNP A2 protein protein. 34 0.50
D28877-1|BAA06031.1| 353|Homo sapiens hnRNP B1 protein protein. 34 0.50
DQ120640-1|ABB92425.1| 630|Homo sapiens PABP3 protein. 34 0.50
BC045608-1|AAH45608.1| 631|Homo sapiens poly(A) binding protein... 34 0.50
BC041863-1|AAH41863.1| 636|Homo sapiens poly(A) binding protein... 34 0.50
BC027617-1|AAH27617.1| 631|Homo sapiens poly(A) binding protein... 34 0.50
BC023520-1|AAH23520.1| 636|Homo sapiens poly(A) binding protein... 34 0.50
BC015958-1|AAH15958.1| 636|Homo sapiens PABPC1 protein protein. 34 0.50
BC000506-1|AAH00506.3| 249|Homo sapiens HNRPA2B1 protein protein. 34 0.50
AL359757-1|CAH70805.1| 631|Homo sapiens poly(A) binding protein... 34 0.50
AF132026-1|AAG38953.1| 631|Homo sapiens testis-specific poly(A)... 34 0.50
U39402-1|AAC99998.1| 367|Homo sapiens 199G4 protein. 33 0.88
BC003402-1|AAH03402.1| 420|Homo sapiens RNA binding motif prote... 33 0.88
AK001152-1|BAA91521.1| 420|Homo sapiens protein ( Homo sapiens ... 33 0.88
AY547318-1|AAS55633.1| 236|Homo sapiens unknown protein. 33 1.2
AL136305-1|CAC36889.1| 236|Homo sapiens protein ( Human DNA seq... 33 1.2
AK095016-1|BAC04474.1| 211|Homo sapiens protein ( Homo sapiens ... 33 1.2
Z23064-1|CAA80599.1| 391|Homo sapiens hnRNP G protein protein. 32 2.0
X71428-1|CAA50559.1| 525|Homo sapiens FUS gycline rich protein ... 32 2.0
U36561-1|AAA79948.1| 528|Homo sapiens fus-like protein protein. 32 2.0
U02019-1|AAC50056.1| 286|Homo sapiens p37 AUF1 protein. 32 2.0
S62140-1|AAB27102.1| 526|Homo sapiens TLS protein. 32 2.0
DQ120650-1|ABB92435.1| 384|Homo sapiens RBM1 protein. 32 2.0
CR457257-1|CAG33538.1| 423|Homo sapiens RNPC4 protein. 32 2.0
CR456747-1|CAG33028.1| 526|Homo sapiens FUS protein. 32 2.0
BT007131-1|AAP35795.1| 526|Homo sapiens fusion, derived from t(... 32 2.0
BC026062-1|AAH26062.1| 526|Homo sapiens fusion (involved in t(1... 32 2.0
BC024208-1|AAH24208.1| 423|Homo sapiens RNA binding motif prote... 32 2.0
BC012942-1|AAH12942.1| 390|Homo sapiens RNA binding motif prote... 32 2.0
BC007435-1|AAH07435.1| 391|Homo sapiens RNA binding motif prote... 32 2.0
BC006550-1|AAH06550.1| 391|Homo sapiens RNA binding motif prote... 32 2.0
BC002566-1|AAH02566.1| 424|Homo sapiens RNA binding motif prote... 32 2.0
BC002459-1|AAH02459.1| 526|Homo sapiens fusion (involved in t(1... 32 2.0
BC000402-1|AAH00402.1| 526|Homo sapiens fusion (involved in t(1... 32 2.0
AY464692-1|AAR28036.1| 391|Homo sapiens heterogeneous nuclear r... 32 2.0
AL683813-6|CAI39448.1| 391|Homo sapiens RNA binding motif prote... 32 2.0
AL139416-3|CAI21694.1| 159|Homo sapiens RNA binding motif prote... 32 2.0
AL139416-2|CAI21693.1| 390|Homo sapiens RNA binding motif prote... 32 2.0
AK001344-1|BAA91638.1| 406|Homo sapiens protein ( Homo sapiens ... 32 2.0
AF275678-1|AAG24388.1| 418|Homo sapiens PP239 protein protein. 32 2.0
AF266723-1|AAK58567.1| 391|Homo sapiens RBMX protein. 32 2.0
AF087905-1|AAP97203.1| 425|Homo sapiens splicing factor SF2 pro... 32 2.0
AF071213-2|AAC35284.1| 525|Homo sapiens FUS/TLS protein protein. 32 2.0
AF071213-1|AAC35285.1| 526|Homo sapiens FUS/TLS protein protein. 32 2.0
AF026126-3|AAC23476.1| 336|Homo sapiens heterogeneous nuclear r... 32 2.0
AB208902-1|BAD92139.1| 300|Homo sapiens fusion (involved in t(1... 32 2.0
X75315-1|CAA53064.1| 230|Homo sapiens SEB4B protein. 31 3.5
M96954-1|AAA36384.1| 375|Homo sapiens nucleolysin TIAR protein. 31 3.5
D89678-1|BAA22860.1| 271|Homo sapiens A+U-rich element RNA bind... 31 3.5
D89092-1|BAA24361.1| 301|Homo sapiens hnRNP JKTBP protein. 31 3.5
D64015-1|BAA21559.1| 265|Homo sapiens T-cluster binding protein... 31 3.5
CR407623-1|CAG28551.1| 420|Homo sapiens HNRPDL protein. 31 3.5
BC071944-1|AAH71944.1| 420|Homo sapiens heterogeneous nuclear r... 31 3.5
BC036708-1|AAH36708.1| 332|Homo sapiens heterogeneous nuclear r... 31 3.5
BC012062-1|AAH12062.1| 407|Homo sapiens DAZ associated protein ... 31 3.5
BC011714-1|AAH11714.1| 420|Homo sapiens heterogeneous nuclear r... 31 3.5
BC009359-1|AAH09359.1| 285|Homo sapiens heterogeneous nuclear r... 31 3.5
BC007392-1|AAH07392.2| 415|Homo sapiens HNRPDL protein protein. 31 3.5
BC006137-1|AAH06137.1| 960|Homo sapiens RBM19 protein protein. 31 3.5
BC004561-1|AAH04561.1| 285|Homo sapiens heterogeneous nuclear r... 31 3.5
BC004289-1|AAH04289.1| 960|Homo sapiens RBM19 protein protein. 31 3.5
BC002625-1|AAH02625.1| 285|Homo sapiens heterogeneous nuclear r... 31 3.5
BC001616-1|AAH01616.1| 285|Homo sapiens heterogeneous nuclear r... 31 3.5
AY678451-1|AAV97647.1| 454|Homo sapiens DAZAP1/MEF2D fusion pro... 31 3.5
AY633610-1|AAV33303.1| 374|Homo sapiens aging-associated gene 7... 31 3.5
AY453824-1|AAR17782.1| 298|Homo sapiens CArG binding factor pro... 31 3.5
AK223425-1|BAD97145.1| 332|Homo sapiens heterogeneous nuclear r... 31 3.5
AK097657-1|BAC05134.1| 332|Homo sapiens protein ( Homo sapiens ... 31 3.5
AF181719-1|AAF78364.1| 407|Homo sapiens DAZ associated protein ... 31 3.5
AC124016-2|AAY40914.1| 420|Homo sapiens unknown protein. 31 3.5
AB066484-1|BAB62188.1| 244|Homo sapiens JKTBP1delta6 protein. 31 3.5
AB017019-1|BAA75241.1| 420|Homo sapiens JKTBP2 protein. 31 3.5
AB017018-2|BAA75240.1| 301|Homo sapiens JKTBP1 protein. 31 3.5
AB017018-1|BAA75239.1| 420|Homo sapiens JKTBP2 protein. 31 3.5
AB014582-1|BAA31657.2| 973|Homo sapiens KIAA0682 protein protein. 31 3.5
X75314-1|CAA53063.1| 229|Homo sapiens SEB4D protein. 31 4.7
BC018711-1|AAH18711.1| 216|Homo sapiens RBM38 protein protein. 31 4.7
BC000488-1|AAH00488.1| 669|Homo sapiens RBM14 protein protein. 31 4.7
AK222830-1|BAD96550.1| 669|Homo sapiens RNA binding motif prote... 31 4.7
AF432218-1|AAL99924.1| 216|Homo sapiens CLL-associated antigen ... 31 4.7
AF315633-1|AAK77962.1| 156|Homo sapiens coactivator modulator p... 31 4.7
AF315632-1|AAK77961.1| 669|Homo sapiens coactivator activator p... 31 4.7
AF080561-1|AAC64058.1| 669|Homo sapiens SYT interacting protein... 31 4.7
AB209007-1|BAD92244.1| 552|Homo sapiens RNA binding motif prote... 31 4.7
U76713-1|AAC50956.1| 331|Homo sapiens ABBP-1 protein. 30 6.2
U75686-1|AAB97309.1| 644|Homo sapiens polyadenylate binding pro... 30 6.2
U33818-1|AAC50350.1| 644|Homo sapiens inducible poly(A)-binding... 30 6.2
M65028-1|AAA36575.1| 284|Homo sapiens hnRNP type A/B protein pr... 30 6.2
L41887-1|AAA88098.1| 238|Homo sapiens splicing factor, arginine... 30 6.2
L22253-1|AAA35495.1| 238|Homo sapiens 9G8 splicing factor protein. 30 6.2
D12799-1|BAA02244.1| 193|Homo sapiens polyadenylate binding pro... 30 6.2
BT006745-1|AAP35391.1| 238|Homo sapiens splicing factor, argini... 30 6.2
BC094755-1|AAH94755.1| 660|Homo sapiens PABPC4 protein protein. 30 6.2
BC071591-1|AAH71591.1| 660|Homo sapiens PABPC4 protein protein. 30 6.2
BC065540-1|AAH65540.1| 631|Homo sapiens PABPC4 protein protein. 30 6.2
BC022328-1|AAH22328.1| 238|Homo sapiens splicing factor, argini... 30 6.2
BC017908-1|AAH17908.1| 238|Homo sapiens splicing factor, argini... 30 6.2
BC017369-1|AAH17369.1| 238|Homo sapiens splicing factor, argini... 30 6.2
BC015944-1|AAH15944.1| 214|Homo sapiens TIA1 protein protein. 30 6.2
BC000997-1|AAH00997.1| 238|Homo sapiens splicing factor, argini... 30 6.2
AY513287-1|AAT08040.1| 238|Homo sapiens aging-associated protei... 30 6.2
AY166860-1|AAN87842.1| 238|Homo sapiens arginine/serine-rich sp... 30 6.2
AL845289-3|CAI12300.1| 644|Homo sapiens poly(A) binding protein... 30 6.2
AL845289-2|CAI12298.1| 660|Homo sapiens poly(A) binding protein... 30 6.2
AL845289-1|CAI12299.1| 615|Homo sapiens poly(A) binding protein... 30 6.2
AL365277-15|CAI16425.1| 410|Homo sapiens poly(A) binding protei... 30 6.2
AL365277-4|CAI16414.1| 644|Homo sapiens poly(A) binding protein... 30 6.2
AL365277-3|CAI16412.1| 660|Homo sapiens poly(A) binding protein... 30 6.2
AL365277-2|CAI16413.1| 615|Homo sapiens poly(A) binding protein... 30 6.2
AK091425-1|BAC03661.1| 137|Homo sapiens protein ( Homo sapiens ... 30 6.2
AC074366-2|AAX93102.1| 238|Homo sapiens unknown protein. 30 6.2
AC016700-3|AAX93193.1| 386|Homo sapiens unknown protein. 30 6.2
AB209211-1|BAD92448.1| 464|Homo sapiens TIA1 protein variant pr... 30 6.2
X75755-1|CAA53383.1| 221|Homo sapiens PR264/SC35 protein. 30 8.2
X62447-1|CAA44307.1| 221|Homo sapiens PR 264 protein. 30 8.2
X03910-1|CAA27544.1| 225|Homo sapiens protein ( Human mRNA for ... 30 8.2
M94630-1|AAA35781.1| 328|Homo sapiens DNA-binding protein protein. 30 8.2
M90104-1|AAA60306.1| 221|Homo sapiens splicing factor protein. 30 8.2
D55674-1|BAA09525.1| 355|Homo sapiens heterogeneous nuclear rib... 30 8.2
D55673-1|BAA09524.1| 215|Homo sapiens heterogeneous nuclear rib... 30 8.2
D55672-1|BAA09523.1| 306|Homo sapiens heterogeneous nuclear rib... 30 8.2
D55671-1|BAA09522.1| 267|Homo sapiens heterogeneous nuclear rib... 30 8.2
BT007250-1|AAP35914.1| 221|Homo sapiens splicing factor, argini... 30 8.2
BC070086-1|AAH70086.1| 221|Homo sapiens splicing factor, argini... 30 8.2
BC026015-1|AAH26015.1| 306|Homo sapiens heterogeneous nuclear r... 30 8.2
BC023977-1|AAH23977.1| 306|Homo sapiens heterogeneous nuclear r... 30 8.2
BC009348-1|AAH09348.1| 686|Homo sapiens cirrhosis, autosomal re... 30 8.2
BC002401-1|AAH02401.1| 355|Homo sapiens heterogeneous nuclear r... 30 8.2
BC001303-1|AAH01303.1| 221|Homo sapiens SFRS2 protein protein. 30 8.2
BC000339-1|AAH00339.1| 221|Homo sapiens SFRS2 protein protein. 30 8.2
BC000167-1|AAH00167.1| 533|Homo sapiens Unknown (protein for IM... 30 8.2
AK223252-1|BAD96972.1| 221|Homo sapiens splicing factor, argini... 30 8.2
AK092489-1|BAC03903.1| 201|Homo sapiens protein ( Homo sapiens ... 30 8.2
AK074795-1|BAC11214.1| 686|Homo sapiens protein ( Homo sapiens ... 30 8.2
AK027675-1|BAB55287.1| 686|Homo sapiens protein ( Homo sapiens ... 30 8.2
AK027634-1|BAB55251.1| 686|Homo sapiens protein ( Homo sapiens ... 30 8.2
AK027445-1|BAB55116.1| 475|Homo sapiens protein ( Homo sapiens ... 30 8.2
AK027419-1|BAB55100.1| 505|Homo sapiens protein ( Homo sapiens ... 30 8.2
AF039575-1|AAB96683.1| 298|Homo sapiens heterogeneous nuclear r... 30 8.2
AF026126-2|AAC23475.1| 306|Homo sapiens heterogeneous nuclear r... 30 8.2
AF026126-1|AAC23474.1| 355|Homo sapiens heterogeneous nuclear r... 30 8.2
AC124016-1|AAY40913.1| 355|Homo sapiens unknown protein. 30 8.2
AB075868-1|BAB85574.2| 636|Homo sapiens KIAA1988 protein protein. 30 8.2
>AC003982-3|AAB95636.1| 362|Homo sapiens WUGSC:H_166H1.2 protein.
Length = 362
Score = 39.5 bits (88), Expect = 0.010
Identities = 16/27 (59%), Positives = 22/27 (81%)
Frame = +3
Query: 159 RIYVGALSDNTTVEELYDYFIQYGKID 239
+I+VG LS NTTVE++ YF Q+GK+D
Sbjct: 110 KIFVGGLSVNTTVEDVKQYFEQFGKVD 136
>AB073212-1|BAB70469.1| 179|Homo sapiens Musashi1 protein.
Length = 179
Score = 39.5 bits (88), Expect = 0.010
Identities = 16/27 (59%), Positives = 22/27 (81%)
Frame = +3
Query: 159 RIYVGALSDNTTVEELYDYFIQYGKID 239
+I+VG LS NTTVE++ YF Q+GK+D
Sbjct: 44 KIFVGGLSVNTTVEDVKQYFEQFGKVD 70
>AB072592-1|BAB69769.1| 181|Homo sapiens Musashi1 protein.
Length = 181
Score = 39.5 bits (88), Expect = 0.010
Identities = 16/27 (59%), Positives = 22/27 (81%)
Frame = +3
Query: 159 RIYVGALSDNTTVEELYDYFIQYGKID 239
+I+VG LS NTTVE++ YF Q+GK+D
Sbjct: 47 KIFVGGLSVNTTVEDVKQYFEQFGKVD 73
>AB072591-1|BAB69768.1| 181|Homo sapiens Musashi1 protein.
Length = 181
Score = 39.5 bits (88), Expect = 0.010
Identities = 16/27 (59%), Positives = 22/27 (81%)
Frame = +3
Query: 159 RIYVGALSDNTTVEELYDYFIQYGKID 239
+I+VG LS NTTVE++ YF Q+GK+D
Sbjct: 47 KIFVGGLSVNTTVEDVKQYFEQFGKVD 73
>AB072590-1|BAB69767.1| 180|Homo sapiens Musashi1 protein.
Length = 180
Score = 39.5 bits (88), Expect = 0.010
Identities = 16/27 (59%), Positives = 22/27 (81%)
Frame = +3
Query: 159 RIYVGALSDNTTVEELYDYFIQYGKID 239
+I+VG LS NTTVE++ YF Q+GK+D
Sbjct: 47 KIFVGGLSVNTTVEDVKQYFEQFGKVD 73
>AB012851-1|BAA33962.1| 362|Homo sapiens Musashi protein.
Length = 362
Score = 39.5 bits (88), Expect = 0.010
Identities = 16/27 (59%), Positives = 22/27 (81%)
Frame = +3
Query: 159 RIYVGALSDNTTVEELYDYFIQYGKID 239
+I+VG LS NTTVE++ YF Q+GK+D
Sbjct: 110 KIFVGGLSVNTTVEDVKQYFEQFGKVD 136
>BC017560-1|AAH17560.1| 151|Homo sapiens MSI2 protein protein.
Length = 151
Score = 36.3 bits (80), Expect = 0.094
Identities = 14/27 (51%), Positives = 21/27 (77%)
Frame = +3
Query: 159 RIYVGALSDNTTVEELYDYFIQYGKID 239
+I+VG LS NT VE++ YF Q+GK++
Sbjct: 7 KIFVGGLSANTVVEDVKQYFEQFGKVE 33
>BC001526-1|AAH01526.1| 328|Homo sapiens musashi homolog 2
(Drosophila) protein.
Length = 328
Score = 36.3 bits (80), Expect = 0.094
Identities = 14/27 (51%), Positives = 21/27 (77%)
Frame = +3
Query: 159 RIYVGALSDNTTVEELYDYFIQYGKID 239
+I+VG LS NT VE++ YF Q+GK++
Sbjct: 111 KIFVGGLSANTVVEDVKQYFEQFGKVE 137
>AK093888-1|BAC04244.1| 251|Homo sapiens protein ( Homo sapiens
cDNA FLJ36569 fis, clone TRACH2010824, highly similar to
Ribonucleoprotein. ).
Length = 251
Score = 36.3 bits (80), Expect = 0.094
Identities = 14/27 (51%), Positives = 21/27 (77%)
Frame = +3
Query: 159 RIYVGALSDNTTVEELYDYFIQYGKID 239
+I+VG LS NT VE++ YF Q+GK++
Sbjct: 107 KIFVGGLSANTVVEDVKQYFEQFGKVE 133
>X79536-1|CAA56072.1| 320|Homo sapiens hnRNPcore protein A1
protein.
Length = 320
Score = 35.9 bits (79), Expect = 0.12
Identities = 18/39 (46%), Positives = 25/39 (64%), Gaps = 3/39 (7%)
Frame = +3
Query: 138 QKSTAHL---RIYVGALSDNTTVEELYDYFIQYGKIDGI 245
Q+ AHL +I+VG + ++T L DYF QYGKI+ I
Sbjct: 96 QRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVI 134
>X12671-1|CAA31191.1| 320|Homo sapiens hnrnp a1 protein protein.
Length = 320
Score = 35.9 bits (79), Expect = 0.12
Identities = 18/39 (46%), Positives = 25/39 (64%), Gaps = 3/39 (7%)
Frame = +3
Query: 138 QKSTAHL---RIYVGALSDNTTVEELYDYFIQYGKIDGI 245
Q+ AHL +I+VG + ++T L DYF QYGKI+ I
Sbjct: 96 QRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVI 134
>BC121133-1|AAI21134.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1 protein.
Length = 320
Score = 35.9 bits (79), Expect = 0.12
Identities = 18/39 (46%), Positives = 25/39 (64%), Gaps = 3/39 (7%)
Frame = +3
Query: 138 QKSTAHL---RIYVGALSDNTTVEELYDYFIQYGKIDGI 245
Q+ AHL +I+VG + ++T L DYF QYGKI+ I
Sbjct: 96 QRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVI 134
>BC108266-1|AAI08267.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1-like protein.
Length = 320
Score = 35.9 bits (79), Expect = 0.12
Identities = 18/39 (46%), Positives = 25/39 (64%), Gaps = 3/39 (7%)
Frame = +3
Query: 138 QKSTAHL---RIYVGALSDNTTVEELYDYFIQYGKIDGI 245
Q+ AHL +I+VG + ++T L DYF QYGKI+ I
Sbjct: 96 QRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVI 134
>BC103707-1|AAI03708.1| 267|Homo sapiens HNRPA1 protein protein.
Length = 267
Score = 35.9 bits (79), Expect = 0.12
Identities = 18/39 (46%), Positives = 25/39 (64%), Gaps = 3/39 (7%)
Frame = +3
Query: 138 QKSTAHL---RIYVGALSDNTTVEELYDYFIQYGKIDGI 245
Q+ AHL +I+VG + ++T L DYF QYGKI+ I
Sbjct: 96 QRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVI 134
>BC074502-1|AAH74502.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1 protein.
Length = 320
Score = 35.9 bits (79), Expect = 0.12
Identities = 18/39 (46%), Positives = 25/39 (64%), Gaps = 3/39 (7%)
Frame = +3
Query: 138 QKSTAHL---RIYVGALSDNTTVEELYDYFIQYGKIDGI 245
Q+ AHL +I+VG + ++T L DYF QYGKI+ I
Sbjct: 96 QRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVI 134
>BC073162-1|AAH73162.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1 protein.
Length = 320
Score = 35.9 bits (79), Expect = 0.12
Identities = 18/39 (46%), Positives = 25/39 (64%), Gaps = 3/39 (7%)
Frame = +3
Query: 138 QKSTAHL---RIYVGALSDNTTVEELYDYFIQYGKIDGI 245
Q+ AHL +I+VG + ++T L DYF QYGKI+ I
Sbjct: 96 QRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVI 134
>BC070315-1|AAH70315.1| 320|Homo sapiens HNRPA1 protein protein.
Length = 320
Score = 35.9 bits (79), Expect = 0.12
Identities = 18/39 (46%), Positives = 25/39 (64%), Gaps = 3/39 (7%)
Frame = +3
Query: 138 QKSTAHL---RIYVGALSDNTTVEELYDYFIQYGKIDGI 245
Q+ AHL +I+VG + ++T L DYF QYGKI+ I
Sbjct: 96 QRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVI 134
>BC052296-1|AAH52296.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1 protein.
Length = 320
Score = 35.9 bits (79), Expect = 0.12
Identities = 18/39 (46%), Positives = 25/39 (64%), Gaps = 3/39 (7%)
Frame = +3
Query: 138 QKSTAHL---RIYVGALSDNTTVEELYDYFIQYGKIDGI 245
Q+ AHL +I+VG + ++T L DYF QYGKI+ I
Sbjct: 96 QRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVI 134
>BC033714-1|AAH33714.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1 protein.
Length = 320
Score = 35.9 bits (79), Expect = 0.12
Identities = 18/39 (46%), Positives = 25/39 (64%), Gaps = 3/39 (7%)
Frame = +3
Query: 138 QKSTAHL---RIYVGALSDNTTVEELYDYFIQYGKIDGI 245
Q+ AHL +I+VG + ++T L DYF QYGKI+ I
Sbjct: 96 QRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVI 134
>BC012158-1|AAH12158.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1 protein.
Length = 320
Score = 35.9 bits (79), Expect = 0.12
Identities = 18/39 (46%), Positives = 25/39 (64%), Gaps = 3/39 (7%)
Frame = +3
Query: 138 QKSTAHL---RIYVGALSDNTTVEELYDYFIQYGKIDGI 245
Q+ AHL +I+VG + ++T L DYF QYGKI+ I
Sbjct: 96 QRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVI 134
>BC009600-1|AAH09600.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1 protein.
Length = 320
Score = 35.9 bits (79), Expect = 0.12
Identities = 18/39 (46%), Positives = 25/39 (64%), Gaps = 3/39 (7%)
Frame = +3
Query: 138 QKSTAHL---RIYVGALSDNTTVEELYDYFIQYGKIDGI 245
Q+ AHL +I+VG + ++T L DYF QYGKI+ I
Sbjct: 96 QRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVI 134
>BC004945-1|AAH04945.1| 298|Homo sapiens Unknown (protein for
IMAGE:3615335) protein.
Length = 298
Score = 35.9 bits (79), Expect = 0.12
Identities = 18/39 (46%), Positives = 25/39 (64%), Gaps = 3/39 (7%)
Frame = +3
Query: 138 QKSTAHL---RIYVGALSDNTTVEELYDYFIQYGKIDGI 245
Q+ AHL +I+VG + ++T L DYF QYGKI+ I
Sbjct: 74 QRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVI 112
>BC002355-1|AAH02355.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1 protein.
Length = 320
Score = 35.9 bits (79), Expect = 0.12
Identities = 18/39 (46%), Positives = 25/39 (64%), Gaps = 3/39 (7%)
Frame = +3
Query: 138 QKSTAHL---RIYVGALSDNTTVEELYDYFIQYGKIDGI 245
Q+ AHL +I+VG + ++T L DYF QYGKI+ I
Sbjct: 96 QRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVI 134
>AL137058-3|CAI16736.1| 320|Homo sapiens protein ( Human DNA
sequence from clone RP11-78J21 on chromosome
13q32.2-33.3 Contains 2 novel genes, a pseudogene
similar to part of TPTE and ).
Length = 320
Score = 35.9 bits (79), Expect = 0.12
Identities = 18/39 (46%), Positives = 25/39 (64%), Gaps = 3/39 (7%)
Frame = +3
Query: 138 QKSTAHL---RIYVGALSDNTTVEELYDYFIQYGKIDGI 245
Q+ AHL +I+VG + ++T L DYF QYGKI+ I
Sbjct: 96 QRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVI 134
>S63912-1|AAB27595.1| 269|Homo sapiens FBRNP protein.
Length = 269
Score = 35.1 bits (77), Expect = 0.22
Identities = 19/42 (45%), Positives = 27/42 (64%), Gaps = 3/42 (7%)
Frame = +3
Query: 141 KSTAHL---RIYVGALSDNTTVEELYDYFIQYGKIDGIIVNE 257
K AHL +I+VG++ ++T L DYF +YGKI+ I V E
Sbjct: 118 KPGAHLTVKKIFVGSIKEDTEEYNLRDYFEKYGKIETIEVME 159
>BC113470-1|AAI13471.1| 378|Homo sapiens LOC653115 protein protein.
Length = 378
Score = 34.7 bits (76), Expect = 0.29
Identities = 19/42 (45%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Frame = +3
Query: 141 KSTAHL---RIYVGALSDNTTVEELYDYFIQYGKIDGIIVNE 257
K AHL +I+VG + ++T L DYF +YGKI+ I V E
Sbjct: 118 KPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVME 159
>BC112027-1|AAI12028.1| 378|Homo sapiens heterogeneous nuclear
ribonucleoprotein A3 protein.
Length = 378
Score = 34.7 bits (76), Expect = 0.29
Identities = 19/42 (45%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Frame = +3
Query: 141 KSTAHL---RIYVGALSDNTTVEELYDYFIQYGKIDGIIVNE 257
K AHL +I+VG + ++T L DYF +YGKI+ I V E
Sbjct: 118 KPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVME 159
>AY363225-1|AAQ63629.1| 378|Homo sapiens heterogeneous nuclear
ribonucleoprotein A3 protein.
Length = 378
Score = 34.7 bits (76), Expect = 0.29
Identities = 19/42 (45%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Frame = +3
Query: 141 KSTAHL---RIYVGALSDNTTVEELYDYFIQYGKIDGIIVNE 257
K AHL +I+VG + ++T L DYF +YGKI+ I V E
Sbjct: 118 KPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVME 159
>AC079305-1|AAY14709.1| 378|Homo sapiens unknown protein.
Length = 378
Score = 34.7 bits (76), Expect = 0.29
Identities = 19/42 (45%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Frame = +3
Query: 141 KSTAHL---RIYVGALSDNTTVEELYDYFIQYGKIDGIIVNE 257
K AHL +I+VG + ++T L DYF +YGKI+ I V E
Sbjct: 118 KPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVME 159
>X06747-1|CAA29922.1| 320|Homo sapiens protein ( Human hnRNP core
protein A1. ).
Length = 320
Score = 34.3 bits (75), Expect = 0.38
Identities = 17/39 (43%), Positives = 25/39 (64%), Gaps = 3/39 (7%)
Frame = +3
Query: 138 QKSTAHL---RIYVGALSDNTTVEELYDYFIQYGKIDGI 245
Q+ AHL +I+VG + ++T L DYF Q+GKI+ I
Sbjct: 96 QRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQFGKIEVI 134
>U89505-1|AAC51293.1| 366|Homo sapiens Hlark protein.
Length = 366
Score = 34.3 bits (75), Expect = 0.38
Identities = 15/40 (37%), Positives = 26/40 (65%)
Frame = +2
Query: 257 NFGFVQFAEESSAQDAIKKANGSVFKGKNIPVRAATDKSE 376
N+GFV ++++A+DAI+ + G NI V A+ +KS+
Sbjct: 36 NYGFVHIEDKTAAEDAIRNLHHYKLHGVNINVEASKNKSK 75
>BC071945-1|AAH71945.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1 protein.
Length = 320
Score = 34.3 bits (75), Expect = 0.38
Identities = 17/39 (43%), Positives = 25/39 (64%), Gaps = 3/39 (7%)
Frame = +3
Query: 138 QKSTAHL---RIYVGALSDNTTVEELYDYFIQYGKIDGI 245
Q+ AHL +I+VG + ++T L DYF Q+GKI+ I
Sbjct: 96 QRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQFGKIEVI 134
>BC064960-1|AAH64960.1| 143|Homo sapiens RBM4 protein protein.
Length = 143
Score = 34.3 bits (75), Expect = 0.38
Identities = 15/40 (37%), Positives = 26/40 (65%)
Frame = +2
Query: 257 NFGFVQFAEESSAQDAIKKANGSVFKGKNIPVRAATDKSE 376
N+GFV ++++A+DAI+ + G NI V A+ +KS+
Sbjct: 36 NYGFVHIEDKTAAEDAIRNLHHYKLHGVNINVEASKNKSK 75
>BC032735-1|AAH32735.1| 364|Homo sapiens RNA binding motif protein
4 protein.
Length = 364
Score = 34.3 bits (75), Expect = 0.38
Identities = 15/40 (37%), Positives = 26/40 (65%)
Frame = +2
Query: 257 NFGFVQFAEESSAQDAIKKANGSVFKGKNIPVRAATDKSE 376
N+GFV ++++A+DAI+ + G NI V A+ +KS+
Sbjct: 36 NYGFVHIEDKTAAEDAIRNLHHYKLHGVNINVEASKNKSK 75
>BC021120-1|AAH21120.1| 177|Homo sapiens RBM4 protein protein.
Length = 177
Score = 34.3 bits (75), Expect = 0.38
Identities = 15/40 (37%), Positives = 26/40 (65%)
Frame = +2
Query: 257 NFGFVQFAEESSAQDAIKKANGSVFKGKNIPVRAATDKSE 376
N+GFV ++++A+DAI+ + G NI V A+ +KS+
Sbjct: 36 NYGFVHIEDKTAAEDAIRNLHHYKLHGVNINVEASKNKSK 75
>BC004951-1|AAH04951.1| 359|Homo sapiens RNA binding motif protein
4B protein.
Length = 359
Score = 34.3 bits (75), Expect = 0.38
Identities = 15/40 (37%), Positives = 26/40 (65%)
Frame = +2
Query: 257 NFGFVQFAEESSAQDAIKKANGSVFKGKNIPVRAATDKSE 376
N+GFV ++++A+DAI+ + G NI V A+ +KS+
Sbjct: 36 NYGFVHIEDKTAAEDAIRNLHHYKLHGVNINVEASKNKSK 75
>BC003503-1|AAH03503.1| 359|Homo sapiens RNA binding motif protein
4B protein.
Length = 359
Score = 34.3 bits (75), Expect = 0.38
Identities = 15/40 (37%), Positives = 26/40 (65%)
Frame = +2
Query: 257 NFGFVQFAEESSAQDAIKKANGSVFKGKNIPVRAATDKSE 376
N+GFV ++++A+DAI+ + G NI V A+ +KS+
Sbjct: 36 NYGFVHIEDKTAAEDAIRNLHHYKLHGVNINVEASKNKSK 75
>BC000307-1|AAH00307.1| 364|Homo sapiens RNA binding motif protein
4 protein.
Length = 364
Score = 34.3 bits (75), Expect = 0.38
Identities = 15/40 (37%), Positives = 26/40 (65%)
Frame = +2
Query: 257 NFGFVQFAEESSAQDAIKKANGSVFKGKNIPVRAATDKSE 376
N+GFV ++++A+DAI+ + G NI V A+ +KS+
Sbjct: 36 NYGFVHIEDKTAAEDAIRNLHHYKLHGVNINVEASKNKSK 75
>Z48501-1|CAA88401.1| 522|Homo sapiens polyadenylate binding
protein II protein.
Length = 522
Score = 33.9 bits (74), Expect = 0.50
Identities = 17/39 (43%), Positives = 19/39 (48%)
Frame = +2
Query: 260 FGFVQFAEESSAQDAIKKANGSVFKGKNIPVRAATDKSE 376
FGFV F AQ A+ + NG GK I V A K E
Sbjct: 208 FGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVE 246
>Y00345-1|CAA68428.1| 633|Homo sapiens protein ( Human mRNA for
polyA binding protein. ).
Length = 633
Score = 33.9 bits (74), Expect = 0.50
Identities = 17/39 (43%), Positives = 19/39 (48%)
Frame = +2
Query: 260 FGFVQFAEESSAQDAIKKANGSVFKGKNIPVRAATDKSE 376
FGFV F AQ A+ + NG GK I V A K E
Sbjct: 230 FGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVE 268
>U68104-1|AAD08718.1| 636|Homo sapiens poly(A)-binding protein
protein.
Length = 636
Score = 33.9 bits (74), Expect = 0.50
Identities = 17/39 (43%), Positives = 19/39 (48%)
Frame = +2
Query: 260 FGFVQFAEESSAQDAIKKANGSVFKGKNIPVRAATDKSE 376
FGFV F AQ A+ + NG GK I V A K E
Sbjct: 233 FGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVE 271
>U09123-1|AAB60650.1| 341|Homo sapiens hnRNP protein A2 protein.
Length = 341
Score = 33.9 bits (74), Expect = 0.50
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +3
Query: 159 RIYVGALSDNTTVEELYDYFIQYGKIDGI 245
+++VG + ++T L DYF +YGKID I
Sbjct: 101 KLFVGGIKEDTEEHHLRDYFEEYGKIDTI 129
Score = 32.7 bits (71), Expect = 1.2
Identities = 13/40 (32%), Positives = 25/40 (62%)
Frame = +3
Query: 132 MKQKSTAHLRIYVGALSDNTTVEELYDYFIQYGKIDGIIV 251
M+++ ++++G LS TT E L +Y+ Q+GK+ +V
Sbjct: 1 MEREKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVV 40
>M29065-1|AAA36574.1| 341|Homo sapiens protein ( Human hnRNP A2
protein mRNA. ).
Length = 341
Score = 33.9 bits (74), Expect = 0.50
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +3
Query: 159 RIYVGALSDNTTVEELYDYFIQYGKIDGI 245
+++VG + ++T L DYF +YGKID I
Sbjct: 101 KLFVGGIKEDTEEHHLRDYFEEYGKIDTI 129
Score = 32.7 bits (71), Expect = 1.2
Identities = 13/40 (32%), Positives = 25/40 (62%)
Frame = +3
Query: 132 MKQKSTAHLRIYVGALSDNTTVEELYDYFIQYGKIDGIIV 251
M+++ ++++G LS TT E L +Y+ Q+GK+ +V
Sbjct: 1 MEREKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVV 40
>M29064-1|AAA60271.1| 353|Homo sapiens SNRPB1 protein.
Length = 353
Score = 33.9 bits (74), Expect = 0.50
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +3
Query: 159 RIYVGALSDNTTVEELYDYFIQYGKIDGI 245
+++VG + ++T L DYF +YGKID I
Sbjct: 113 KLFVGGIKEDTEEHHLRDYFEEYGKIDTI 141
Score = 32.3 bits (70), Expect = 1.5
Identities = 13/39 (33%), Positives = 24/39 (61%)
Frame = +3
Query: 135 KQKSTAHLRIYVGALSDNTTVEELYDYFIQYGKIDGIIV 251
K++ ++++G LS TT E L +Y+ Q+GK+ +V
Sbjct: 14 KREKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVV 52
>D28877-2|BAA06032.1| 341|Homo sapiens hnRNP A2 protein protein.
Length = 341
Score = 33.9 bits (74), Expect = 0.50
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +3
Query: 159 RIYVGALSDNTTVEELYDYFIQYGKIDGI 245
+++VG + ++T L DYF +YGKID I
Sbjct: 101 KLFVGGIKEDTEEHHLRDYFEEYGKIDTI 129
Score = 32.7 bits (71), Expect = 1.2
Identities = 13/40 (32%), Positives = 25/40 (62%)
Frame = +3
Query: 132 MKQKSTAHLRIYVGALSDNTTVEELYDYFIQYGKIDGIIV 251
M+++ ++++G LS TT E L +Y+ Q+GK+ +V
Sbjct: 1 MEREKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVV 40
>D28877-1|BAA06031.1| 353|Homo sapiens hnRNP B1 protein protein.
Length = 353
Score = 33.9 bits (74), Expect = 0.50
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +3
Query: 159 RIYVGALSDNTTVEELYDYFIQYGKIDGI 245
+++VG + ++T L DYF +YGKID I
Sbjct: 113 KLFVGGIKEDTEEHHLRDYFEEYGKIDTI 141
Score = 32.3 bits (70), Expect = 1.5
Identities = 13/39 (33%), Positives = 24/39 (61%)
Frame = +3
Query: 135 KQKSTAHLRIYVGALSDNTTVEELYDYFIQYGKIDGIIV 251
K++ ++++G LS TT E L +Y+ Q+GK+ +V
Sbjct: 14 KREKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVV 52
>DQ120640-1|ABB92425.1| 630|Homo sapiens PABP3 protein.
Length = 630
Score = 33.9 bits (74), Expect = 0.50
Identities = 17/39 (43%), Positives = 19/39 (48%)
Frame = +2
Query: 260 FGFVQFAEESSAQDAIKKANGSVFKGKNIPVRAATDKSE 376
FGFV F AQ A+ + NG GK I V A K E
Sbjct: 233 FGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVE 271
Score = 31.9 bits (69), Expect = 2.0
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +2
Query: 260 FGFVQFAEESSAQDAIKKANGSVFKGKNIPVRAATDKSE 376
+GFV F +A+ AIKK NG + G+ + V + E
Sbjct: 140 YGFVHFETHEAAERAIKKMNGMLLNGRKVFVGQFKSRKE 178
>BC045608-1|AAH45608.1| 631|Homo sapiens poly(A) binding protein,
cytoplasmic 3 protein.
Length = 631
Score = 33.9 bits (74), Expect = 0.50
Identities = 17/39 (43%), Positives = 19/39 (48%)
Frame = +2
Query: 260 FGFVQFAEESSAQDAIKKANGSVFKGKNIPVRAATDKSE 376
FGFV F AQ A+ + NG GK I V A K E
Sbjct: 233 FGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVE 271
Score = 31.9 bits (69), Expect = 2.0
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +2
Query: 260 FGFVQFAEESSAQDAIKKANGSVFKGKNIPVRAATDKSE 376
+GFV F +A+ AIKK NG + G+ + V + E
Sbjct: 140 YGFVHFETHEAAERAIKKMNGMLLNGRKVFVGQFKSRKE 178
>BC041863-1|AAH41863.1| 636|Homo sapiens poly(A) binding protein,
cytoplasmic 1 protein.
Length = 636
Score = 33.9 bits (74), Expect = 0.50
Identities = 17/39 (43%), Positives = 19/39 (48%)
Frame = +2
Query: 260 FGFVQFAEESSAQDAIKKANGSVFKGKNIPVRAATDKSE 376
FGFV F AQ A+ + NG GK I V A K E
Sbjct: 233 FGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVE 271
>BC027617-1|AAH27617.1| 631|Homo sapiens poly(A) binding protein,
cytoplasmic 3 protein.
Length = 631
Score = 33.9 bits (74), Expect = 0.50
Identities = 17/39 (43%), Positives = 19/39 (48%)
Frame = +2
Query: 260 FGFVQFAEESSAQDAIKKANGSVFKGKNIPVRAATDKSE 376
FGFV F AQ A+ + NG GK I V A K E
Sbjct: 233 FGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVE 271
Score = 31.9 bits (69), Expect = 2.0
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +2
Query: 260 FGFVQFAEESSAQDAIKKANGSVFKGKNIPVRAATDKSE 376
+GFV F +A+ AIKK NG + G+ + V + E
Sbjct: 140 YGFVHFETHEAAERAIKKMNGMLLNGRKVFVGQFKSRKE 178
>BC023520-1|AAH23520.1| 636|Homo sapiens poly(A) binding protein,
cytoplasmic 1 protein.
Length = 636
Score = 33.9 bits (74), Expect = 0.50
Identities = 17/39 (43%), Positives = 19/39 (48%)
Frame = +2
Query: 260 FGFVQFAEESSAQDAIKKANGSVFKGKNIPVRAATDKSE 376
FGFV F AQ A+ + NG GK I V A K E
Sbjct: 233 FGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVE 271
>BC015958-1|AAH15958.1| 636|Homo sapiens PABPC1 protein protein.
Length = 636
Score = 33.9 bits (74), Expect = 0.50
Identities = 17/39 (43%), Positives = 19/39 (48%)
Frame = +2
Query: 260 FGFVQFAEESSAQDAIKKANGSVFKGKNIPVRAATDKSE 376
FGFV F AQ A+ + NG GK I V A K E
Sbjct: 233 FGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVE 271
>BC000506-1|AAH00506.3| 249|Homo sapiens HNRPA2B1 protein protein.
Length = 249
Score = 33.9 bits (74), Expect = 0.50
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +3
Query: 159 RIYVGALSDNTTVEELYDYFIQYGKIDGI 245
+++VG + ++T L DYF +YGKID I
Sbjct: 101 KLFVGGIKEDTEEHHLRDYFEEYGKIDTI 129
Score = 32.7 bits (71), Expect = 1.2
Identities = 13/40 (32%), Positives = 25/40 (62%)
Frame = +3
Query: 132 MKQKSTAHLRIYVGALSDNTTVEELYDYFIQYGKIDGIIV 251
M+++ ++++G LS TT E L +Y+ Q+GK+ +V
Sbjct: 1 MEREKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVV 40
>AL359757-1|CAH70805.1| 631|Homo sapiens poly(A) binding protein,
cytoplasmic 3 protein.
Length = 631
Score = 33.9 bits (74), Expect = 0.50
Identities = 17/39 (43%), Positives = 19/39 (48%)
Frame = +2
Query: 260 FGFVQFAEESSAQDAIKKANGSVFKGKNIPVRAATDKSE 376
FGFV F AQ A+ + NG GK I V A K E
Sbjct: 233 FGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVE 271
Score = 31.9 bits (69), Expect = 2.0
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +2
Query: 260 FGFVQFAEESSAQDAIKKANGSVFKGKNIPVRAATDKSE 376
+GFV F +A+ AIKK NG + G+ + V + E
Sbjct: 140 YGFVHFETHEAAERAIKKMNGMLLNGRKVFVGQFKSRKE 178
>AF132026-1|AAG38953.1| 631|Homo sapiens testis-specific
poly(A)-binding protein protein.
Length = 631
Score = 33.9 bits (74), Expect = 0.50
Identities = 17/39 (43%), Positives = 19/39 (48%)
Frame = +2
Query: 260 FGFVQFAEESSAQDAIKKANGSVFKGKNIPVRAATDKSE 376
FGFV F AQ A+ + NG GK I V A K E
Sbjct: 233 FGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVE 271
Score = 31.9 bits (69), Expect = 2.0
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +2
Query: 260 FGFVQFAEESSAQDAIKKANGSVFKGKNIPVRAATDKSE 376
+GFV F +A+ AIKK NG + G+ + V + E
Sbjct: 140 YGFVHFETHEAAERAIKKMNGMLLNGRKVFVGQFKSRKE 178
>U39402-1|AAC99998.1| 367|Homo sapiens 199G4 protein.
Length = 367
Score = 33.1 bits (72), Expect = 0.88
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = +3
Query: 114 TLDRIDMKQKSTAHLRIYVGALSDNTTVEELYDYFIQYGKIDGIIV 251
T+ R+D + T +YVG L D T +L ++F Q+G+I I V
Sbjct: 166 TMPRLDPPEDKTI-TTLYVGGLGDTITETDLRNHFYQFGEIRTITV 210
>BC003402-1|AAH03402.1| 420|Homo sapiens RNA binding motif protein
22 protein.
Length = 420
Score = 33.1 bits (72), Expect = 0.88
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = +3
Query: 114 TLDRIDMKQKSTAHLRIYVGALSDNTTVEELYDYFIQYGKIDGIIV 251
T+ R+D + T +YVG L D T +L ++F Q+G+I I V
Sbjct: 219 TMPRLDPPEDKTI-TTLYVGGLGDTITETDLRNHFYQFGEIRTITV 263
>AK001152-1|BAA91521.1| 420|Homo sapiens protein ( Homo sapiens
cDNA FLJ10290 fis, clone MAMMA1002385, weakly similar to
RIBONUCLEOPROTEIN RB97D. ).
Length = 420
Score = 33.1 bits (72), Expect = 0.88
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = +3
Query: 114 TLDRIDMKQKSTAHLRIYVGALSDNTTVEELYDYFIQYGKIDGIIV 251
T+ R+D + T +YVG L D T +L ++F Q+G+I I V
Sbjct: 219 TMPRLDPPEDKTI-TTLYVGGLGDTITETDLRNHFYQFGEIRTITV 263
>AY547318-1|AAS55633.1| 236|Homo sapiens unknown protein.
Length = 236
Score = 32.7 bits (71), Expect = 1.2
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +3
Query: 138 QKSTAHLRIYVGALSDNTTVEELYDYFIQYGKIDGIIV 251
QK T + +I+VG L +TT L YF +G+I+ +V
Sbjct: 5 QKDTTYTKIFVGGLPYHTTDASLRKYFEVFGEIEEAVV 42
>AL136305-1|CAC36889.1| 236|Homo sapiens protein ( Human DNA
sequence from clone RP1-259A10 on chromosome 6p22.1-23
Contains the gene for an ssDNA binding protein and a CpG
island. ).
Length = 236
Score = 32.7 bits (71), Expect = 1.2
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +3
Query: 138 QKSTAHLRIYVGALSDNTTVEELYDYFIQYGKIDGIIV 251
QK T + +I+VG L +TT L YF +G+I+ +V
Sbjct: 5 QKDTTYTKIFVGGLPYHTTDASLRKYFEVFGEIEEAVV 42
>AK095016-1|BAC04474.1| 211|Homo sapiens protein ( Homo sapiens
cDNA FLJ37697 fis, clone BRHIP2015360, highly similar to
Xenopus laevis RRM-containing protein SEB-4 mRNA. ).
Length = 211
Score = 32.7 bits (71), Expect = 1.2
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +3
Query: 138 QKSTAHLRIYVGALSDNTTVEELYDYFIQYGKIDGIIV 251
QK T + +I+VG L +TT L YF +G+I+ +V
Sbjct: 5 QKDTTYTKIFVGGLPYHTTDASLRKYFEVFGEIEEAVV 42
>Z23064-1|CAA80599.1| 391|Homo sapiens hnRNP G protein protein.
Length = 391
Score = 31.9 bits (69), Expect = 2.0
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = +2
Query: 260 FGFVQFAEESSAQDAIKKANGSVFKGKNIPVRAATDKS 373
F FV F + A+DA + NG GK I V AT S
Sbjct: 51 FAFVTFESPADAKDAARDMNGKSLDGKAIKVEQATKPS 88
>X71428-1|CAA50559.1| 525|Homo sapiens FUS gycline rich protein
protein.
Length = 525
Score = 31.9 bits (69), Expect = 2.0
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +3
Query: 123 RIDMKQKSTAHLRIYVGALSDNTTVEELYDYFIQYGKI 236
R D +Q ++ + I+V L +N T+E + DYF Q G I
Sbjct: 273 RHDSEQDNSDNNTIFVQGLGENVTIESVADYFKQIGII 310
>U36561-1|AAA79948.1| 528|Homo sapiens fus-like protein protein.
Length = 528
Score = 31.9 bits (69), Expect = 2.0
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +3
Query: 123 RIDMKQKSTAHLRIYVGALSDNTTVEELYDYFIQYGKI 236
R D +Q ++ + I+V L +N T+E + DYF Q G I
Sbjct: 277 RHDSEQDNSDNNTIFVQGLGENVTIESVADYFKQIGII 314
>U02019-1|AAC50056.1| 286|Homo sapiens p37 AUF1 protein.
Length = 286
Score = 31.9 bits (69), Expect = 2.0
Identities = 12/38 (31%), Positives = 25/38 (65%)
Frame = +3
Query: 123 RIDMKQKSTAHLRIYVGALSDNTTVEELYDYFIQYGKI 236
+ID + ++++G LS +TT ++L DYF ++G++
Sbjct: 65 KIDASKNEEDEGKMFIGGLSWDTTKKDLKDYFSKFGEV 102
Score = 29.9 bits (64), Expect = 8.2
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +3
Query: 132 MKQKSTAHLRIYVGALSDNTTVEELYDYFIQYGKIDGI 245
MK K +I+VG LS +T E++ +YF +G+++ I
Sbjct: 154 MKTKEPVK-KIFVGGLSPDTPEEKIREYFGGFGEVESI 190
>S62140-1|AAB27102.1| 526|Homo sapiens TLS protein.
Length = 526
Score = 31.9 bits (69), Expect = 2.0
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +3
Query: 123 RIDMKQKSTAHLRIYVGALSDNTTVEELYDYFIQYGKI 236
R D +Q ++ + I+V L +N T+E + DYF Q G I
Sbjct: 274 RHDSEQDNSDNNTIFVQGLGENVTIESVADYFKQIGII 311
>DQ120650-1|ABB92435.1| 384|Homo sapiens RBM1 protein.
Length = 384
Score = 31.9 bits (69), Expect = 2.0
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = +2
Query: 260 FGFVQFAEESSAQDAIKKANGSVFKGKNIPVRAATDKS 373
F FV F + A+DA + NG GK I V AT S
Sbjct: 51 FAFVTFESPADAKDAARDMNGKSLDGKAIKVEQATKPS 88
>CR457257-1|CAG33538.1| 423|Homo sapiens RNPC4 protein.
Length = 423
Score = 31.9 bits (69), Expect = 2.0
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +3
Query: 156 LRIYVGALSDNTTVEELYDYFIQYGKIDGIIV 251
+R+YVG+L N T + L F +GKID I++
Sbjct: 247 MRLYVGSLHFNITEDMLRGIFEPFGKIDNIVL 278
>CR456747-1|CAG33028.1| 526|Homo sapiens FUS protein.
Length = 526
Score = 31.9 bits (69), Expect = 2.0
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +3
Query: 123 RIDMKQKSTAHLRIYVGALSDNTTVEELYDYFIQYGKI 236
R D +Q ++ + I+V L +N T+E + DYF Q G I
Sbjct: 274 RHDSEQDNSDNNTIFVQGLGENVTIESVADYFKQIGII 311
>BT007131-1|AAP35795.1| 526|Homo sapiens fusion, derived from
t(12;16) malignant liposarcoma protein.
Length = 526
Score = 31.9 bits (69), Expect = 2.0
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +3
Query: 123 RIDMKQKSTAHLRIYVGALSDNTTVEELYDYFIQYGKI 236
R D +Q ++ + I+V L +N T+E + DYF Q G I
Sbjct: 274 RHDSEQDNSDNNTIFVQGLGENVTIESVADYFKQIGII 311
>BC026062-1|AAH26062.1| 526|Homo sapiens fusion (involved in
t(12;16) in malignant liposarcoma) protein.
Length = 526
Score = 31.9 bits (69), Expect = 2.0
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +3
Query: 123 RIDMKQKSTAHLRIYVGALSDNTTVEELYDYFIQYGKI 236
R D +Q ++ + I+V L +N T+E + DYF Q G I
Sbjct: 274 RHDSEQDNSDNNTIFVQGLGENVTIESVADYFKQIGII 311
>BC024208-1|AAH24208.1| 423|Homo sapiens RNA binding motif protein
23 protein.
Length = 423
Score = 31.9 bits (69), Expect = 2.0
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +3
Query: 156 LRIYVGALSDNTTVEELYDYFIQYGKIDGIIV 251
+R+YVG+L N T + L F +GKID I++
Sbjct: 247 MRLYVGSLHFNITEDMLRGIFEPFGKIDNIVL 278
>BC012942-1|AAH12942.1| 390|Homo sapiens RNA binding motif protein,
X-linked-like 1 protein.
Length = 390
Score = 31.9 bits (69), Expect = 2.0
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = +2
Query: 260 FGFVQFAEESSAQDAIKKANGSVFKGKNIPVRAATDKS 373
F FV F + A+DA + NG GK I V AT S
Sbjct: 51 FAFVTFESPADAKDAARDMNGKSLDGKAIKVEQATKPS 88
>BC007435-1|AAH07435.1| 391|Homo sapiens RNA binding motif protein,
X-linked protein.
Length = 391
Score = 31.9 bits (69), Expect = 2.0
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = +2
Query: 260 FGFVQFAEESSAQDAIKKANGSVFKGKNIPVRAATDKS 373
F FV F + A+DA + NG GK I V AT S
Sbjct: 51 FAFVTFESPADAKDAARDMNGKSLDGKAIKVEQATKPS 88
>BC006550-1|AAH06550.1| 391|Homo sapiens RNA binding motif protein,
X-linked protein.
Length = 391
Score = 31.9 bits (69), Expect = 2.0
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = +2
Query: 260 FGFVQFAEESSAQDAIKKANGSVFKGKNIPVRAATDKS 373
F FV F + A+DA + NG GK I V AT S
Sbjct: 51 FAFVTFESPADAKDAARDMNGKSLDGKAIKVEQATKPS 88
>BC002566-1|AAH02566.1| 424|Homo sapiens RNA binding motif protein
23 protein.
Length = 424
Score = 31.9 bits (69), Expect = 2.0
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +3
Query: 156 LRIYVGALSDNTTVEELYDYFIQYGKIDGIIV 251
+R+YVG+L N T + L F +GKID I++
Sbjct: 247 MRLYVGSLHFNITEDMLRGIFEPFGKIDNIVL 278
>BC002459-1|AAH02459.1| 526|Homo sapiens fusion (involved in
t(12;16) in malignant liposarcoma) protein.
Length = 526
Score = 31.9 bits (69), Expect = 2.0
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +3
Query: 123 RIDMKQKSTAHLRIYVGALSDNTTVEELYDYFIQYGKI 236
R D +Q ++ + I+V L +N T+E + DYF Q G I
Sbjct: 274 RHDSEQDNSDNNTIFVQGLGENVTIESVADYFKQIGII 311
>BC000402-1|AAH00402.1| 526|Homo sapiens fusion (involved in
t(12;16) in malignant liposarcoma) protein.
Length = 526
Score = 31.9 bits (69), Expect = 2.0
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +3
Query: 123 RIDMKQKSTAHLRIYVGALSDNTTVEELYDYFIQYGKI 236
R D +Q ++ + I+V L +N T+E + DYF Q G I
Sbjct: 274 RHDSEQDNSDNNTIFVQGLGENVTIESVADYFKQIGII 311
>AY464692-1|AAR28036.1| 391|Homo sapiens heterogeneous nuclear
ribonucleoprotein G protein.
Length = 391
Score = 31.9 bits (69), Expect = 2.0
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = +2
Query: 260 FGFVQFAEESSAQDAIKKANGSVFKGKNIPVRAATDKS 373
F FV F + A+DA + NG GK I V AT S
Sbjct: 51 FAFVTFESPADAKDAARDMNGKSLDGKAIKVEQATKPS 88
>AL683813-6|CAI39448.1| 391|Homo sapiens RNA binding motif protein,
X-linked protein.
Length = 391
Score = 31.9 bits (69), Expect = 2.0
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = +2
Query: 260 FGFVQFAEESSAQDAIKKANGSVFKGKNIPVRAATDKS 373
F FV F + A+DA + NG GK I V AT S
Sbjct: 51 FAFVTFESPADAKDAARDMNGKSLDGKAIKVEQATKPS 88
>AL139416-3|CAI21694.1| 159|Homo sapiens RNA binding motif protein,
X-linked-like 1 protein.
Length = 159
Score = 31.9 bits (69), Expect = 2.0
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = +2
Query: 260 FGFVQFAEESSAQDAIKKANGSVFKGKNIPVRAATDKS 373
F FV F + A+DA + NG GK I V AT S
Sbjct: 51 FAFVTFESPADAKDAARDMNGKSLDGKAIKVEQATKPS 88
>AL139416-2|CAI21693.1| 390|Homo sapiens RNA binding motif protein,
X-linked-like 1 protein.
Length = 390
Score = 31.9 bits (69), Expect = 2.0
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = +2
Query: 260 FGFVQFAEESSAQDAIKKANGSVFKGKNIPVRAATDKS 373
F FV F + A+DA + NG GK I V AT S
Sbjct: 51 FAFVTFESPADAKDAARDMNGKSLDGKAIKVEQATKPS 88
>AK001344-1|BAA91638.1| 406|Homo sapiens protein ( Homo sapiens
cDNA FLJ10482 fis, clone NT2RP2000153, weakly similar to
GAR2 PROTEIN. ).
Length = 406
Score = 31.9 bits (69), Expect = 2.0
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +3
Query: 156 LRIYVGALSDNTTVEELYDYFIQYGKIDGIIV 251
+R+YVG+L N T + L F +GKID I++
Sbjct: 229 MRLYVGSLHFNITEDMLRGIFEPFGKIDNIVL 260
>AF275678-1|AAG24388.1| 418|Homo sapiens PP239 protein protein.
Length = 418
Score = 31.9 bits (69), Expect = 2.0
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +3
Query: 156 LRIYVGALSDNTTVEELYDYFIQYGKIDGIIV 251
+R+YVG+L N T + L F +GKID I++
Sbjct: 241 MRLYVGSLHFNITEDMLRGIFEPFGKIDNIVL 272
>AF266723-1|AAK58567.1| 391|Homo sapiens RBMX protein.
Length = 391
Score = 31.9 bits (69), Expect = 2.0
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = +2
Query: 260 FGFVQFAEESSAQDAIKKANGSVFKGKNIPVRAATDKS 373
F FV F + A+DA + NG GK I V AT S
Sbjct: 51 FAFVTFESPADAKDAARDMNGKSLDGKAIKVEQATKPS 88
>AF087905-1|AAP97203.1| 425|Homo sapiens splicing factor SF2
protein.
Length = 425
Score = 31.9 bits (69), Expect = 2.0
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +3
Query: 156 LRIYVGALSDNTTVEELYDYFIQYGKIDGIIV 251
+R+YVG+L N T + L F +GKID I++
Sbjct: 247 MRLYVGSLHFNITEDMLRGIFEPFGKIDNIVL 278
>AF071213-2|AAC35284.1| 525|Homo sapiens FUS/TLS protein protein.
Length = 525
Score = 31.9 bits (69), Expect = 2.0
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +3
Query: 123 RIDMKQKSTAHLRIYVGALSDNTTVEELYDYFIQYGKI 236
R D +Q ++ + I+V L +N T+E + DYF Q G I
Sbjct: 273 RHDSEQDNSDNNTIFVQGLGENVTIESVADYFKQIGII 310
>AF071213-1|AAC35285.1| 526|Homo sapiens FUS/TLS protein protein.
Length = 526
Score = 31.9 bits (69), Expect = 2.0
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +3
Query: 123 RIDMKQKSTAHLRIYVGALSDNTTVEELYDYFIQYGKI 236
R D +Q ++ + I+V L +N T+E + DYF Q G I
Sbjct: 274 RHDSEQDNSDNNTIFVQGLGENVTIESVADYFKQIGII 311
>AF026126-3|AAC23476.1| 336|Homo sapiens heterogeneous nuclear
ribonucleoprotein D protein.
Length = 336
Score = 31.9 bits (69), Expect = 2.0
Identities = 12/38 (31%), Positives = 25/38 (65%)
Frame = +3
Query: 123 RIDMKQKSTAHLRIYVGALSDNTTVEELYDYFIQYGKI 236
+ID + ++++G LS +TT ++L DYF ++G++
Sbjct: 67 KIDASKNEEDEGKMFIGGLSWDTTKKDLKDYFSKFGEV 104
Score = 29.9 bits (64), Expect = 8.2
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +3
Query: 132 MKQKSTAHLRIYVGALSDNTTVEELYDYFIQYGKIDGI 245
MK K +I+VG LS +T E++ +YF +G+++ I
Sbjct: 156 MKTKEPVK-KIFVGGLSPDTPEEKIREYFGGFGEVESI 192
>AB208902-1|BAD92139.1| 300|Homo sapiens fusion (involved in
t(12;16) in malignant liposarcoma) isoform a variant
protein.
Length = 300
Score = 31.9 bits (69), Expect = 2.0
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +3
Query: 123 RIDMKQKSTAHLRIYVGALSDNTTVEELYDYFIQYGKI 236
R D +Q ++ + I+V L +N T+E + DYF Q G I
Sbjct: 48 RHDSEQDNSDNNTIFVQGLGENVTIESVADYFKQIGII 85
>X75315-1|CAA53064.1| 230|Homo sapiens SEB4B protein.
Length = 230
Score = 31.1 bits (67), Expect = 3.5
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +3
Query: 135 KQKSTAHLRIYVGALSDNTTVEELYDYFIQYGKIDGIIV 251
K+K T +I+VG L +TT L YF +G I+ +V
Sbjct: 18 KKKGTTFTKIFVGGLPYHTTDASLRKYFEGFGDIEEAVV 56
>M96954-1|AAA36384.1| 375|Homo sapiens nucleolysin TIAR protein.
Length = 375
Score = 31.1 bits (67), Expect = 3.5
Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +3
Query: 135 KQKSTAHLRIYVGALSDNTTVEELYDYFIQYGKI-DGIIVNEI 260
K+ ++ H ++VG LS T E++ F +GKI D +V ++
Sbjct: 90 KKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDM 132
>D89678-1|BAA22860.1| 271|Homo sapiens A+U-rich element RNA binding
factor protein.
Length = 271
Score = 31.1 bits (67), Expect = 3.5
Identities = 11/29 (37%), Positives = 22/29 (75%)
Frame = +3
Query: 159 RIYVGALSDNTTVEELYDYFIQYGKIDGI 245
+++VG LS +T+ E++ +YF +G+I+ I
Sbjct: 85 KVFVGGLSPDTSEEQIKEYFGAFGEIENI 113
>D89092-1|BAA24361.1| 301|Homo sapiens hnRNP JKTBP protein.
Length = 301
Score = 31.1 bits (67), Expect = 3.5
Identities = 11/29 (37%), Positives = 22/29 (75%)
Frame = +3
Query: 159 RIYVGALSDNTTVEELYDYFIQYGKIDGI 245
+++VG LS +T+ E++ +YF +G+I+ I
Sbjct: 115 KVFVGGLSPDTSEEQIKEYFGAFGEIENI 143
>D64015-1|BAA21559.1| 265|Homo sapiens T-cluster binding protein
protein.
Length = 265
Score = 31.1 bits (67), Expect = 3.5
Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +3
Query: 135 KQKSTAHLRIYVGALSDNTTVEELYDYFIQYGKI-DGIIVNEI 260
K+ ++ H ++VG LS T E++ F +GKI D +V ++
Sbjct: 51 KKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDM 93
>CR407623-1|CAG28551.1| 420|Homo sapiens HNRPDL protein.
Length = 420
Score = 31.1 bits (67), Expect = 3.5
Identities = 11/29 (37%), Positives = 22/29 (75%)
Frame = +3
Query: 159 RIYVGALSDNTTVEELYDYFIQYGKIDGI 245
+++VG LS +T+ E++ +YF +G+I+ I
Sbjct: 234 KVFVGGLSPDTSEEQIKEYFGAFGEIENI 262
>BC071944-1|AAH71944.1| 420|Homo sapiens heterogeneous nuclear
ribonucleoprotein D-like protein.
Length = 420
Score = 31.1 bits (67), Expect = 3.5
Identities = 11/29 (37%), Positives = 22/29 (75%)
Frame = +3
Query: 159 RIYVGALSDNTTVEELYDYFIQYGKIDGI 245
+++VG LS +T+ E++ +YF +G+I+ I
Sbjct: 234 KVFVGGLSPDTSEEQIKEYFGAFGEIENI 262
>BC036708-1|AAH36708.1| 332|Homo sapiens heterogeneous nuclear
ribonucleoprotein A/B protein.
Length = 332
Score = 31.1 bits (67), Expect = 3.5
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +3
Query: 132 MKQKSTAHLRIYVGALSDNTTVEELYDYFIQYGKIDGI 245
M K +I+VG L+ T E++ +YF ++G+I+ I
Sbjct: 146 MAMKKDPVKKIFVGGLNPEATEEKIREYFGEFGEIEAI 183
Score = 30.3 bits (65), Expect = 6.2
Identities = 12/39 (30%), Positives = 26/39 (66%)
Frame = +3
Query: 120 DRIDMKQKSTAHLRIYVGALSDNTTVEELYDYFIQYGKI 236
D+I+ + +++VG LS +T+ ++L DYF ++G++
Sbjct: 58 DQINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEV 96
>BC012062-1|AAH12062.1| 407|Homo sapiens DAZ associated protein 1
protein.
Length = 407
Score = 31.1 bits (67), Expect = 3.5
Identities = 14/34 (41%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Frame = +3
Query: 159 RIYVGALSDNTTVEELYDYFIQYGK-IDGIIVNE 257
+++VG L +TT E L YF QYG+ +D +I+ +
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKD 44
>BC011714-1|AAH11714.1| 420|Homo sapiens heterogeneous nuclear
ribonucleoprotein D-like protein.
Length = 420
Score = 31.1 bits (67), Expect = 3.5
Identities = 11/29 (37%), Positives = 22/29 (75%)
Frame = +3
Query: 159 RIYVGALSDNTTVEELYDYFIQYGKIDGI 245
+++VG LS +T+ E++ +YF +G+I+ I
Sbjct: 234 KVFVGGLSPDTSEEQIKEYFGAFGEIENI 262
>BC009359-1|AAH09359.1| 285|Homo sapiens heterogeneous nuclear
ribonucleoprotein A/B protein.
Length = 285
Score = 31.1 bits (67), Expect = 3.5
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +3
Query: 132 MKQKSTAHLRIYVGALSDNTTVEELYDYFIQYGKIDGI 245
M K +I+VG L+ T E++ +YF ++G+I+ I
Sbjct: 146 MAMKKDPVKKIFVGGLNPEATEEKIREYFGEFGEIEAI 183
Score = 30.3 bits (65), Expect = 6.2
Identities = 12/39 (30%), Positives = 26/39 (66%)
Frame = +3
Query: 120 DRIDMKQKSTAHLRIYVGALSDNTTVEELYDYFIQYGKI 236
D+I+ + +++VG LS +T+ ++L DYF ++G++
Sbjct: 58 DQINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEV 96
>BC007392-1|AAH07392.2| 415|Homo sapiens HNRPDL protein protein.
Length = 415
Score = 31.1 bits (67), Expect = 3.5
Identities = 11/29 (37%), Positives = 22/29 (75%)
Frame = +3
Query: 159 RIYVGALSDNTTVEELYDYFIQYGKIDGI 245
+++VG LS +T+ E++ +YF +G+I+ I
Sbjct: 229 KVFVGGLSPDTSEEQIKEYFGAFGEIENI 257
>BC006137-1|AAH06137.1| 960|Homo sapiens RBM19 protein protein.
Length = 960
Score = 31.1 bits (67), Expect = 3.5
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +2
Query: 260 FGFVQFAEESSAQDAIKKANGSVFKGKNIPVR 355
FGFV++ + AQ A+K+ G V G + VR
Sbjct: 776 FGFVEYRKPEQAQKALKQLQGHVVDGHKLEVR 807
>BC004561-1|AAH04561.1| 285|Homo sapiens heterogeneous nuclear
ribonucleoprotein A/B protein.
Length = 285
Score = 31.1 bits (67), Expect = 3.5
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +3
Query: 132 MKQKSTAHLRIYVGALSDNTTVEELYDYFIQYGKIDGI 245
M K +I+VG L+ T E++ +YF ++G+I+ I
Sbjct: 146 MAMKKDPVKKIFVGGLNPEATEEKIREYFGEFGEIEAI 183
Score = 30.3 bits (65), Expect = 6.2
Identities = 12/39 (30%), Positives = 26/39 (66%)
Frame = +3
Query: 120 DRIDMKQKSTAHLRIYVGALSDNTTVEELYDYFIQYGKI 236
D+I+ + +++VG LS +T+ ++L DYF ++G++
Sbjct: 58 DQINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEV 96
>BC004289-1|AAH04289.1| 960|Homo sapiens RBM19 protein protein.
Length = 960
Score = 31.1 bits (67), Expect = 3.5
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +2
Query: 260 FGFVQFAEESSAQDAIKKANGSVFKGKNIPVR 355
FGFV++ + AQ A+K+ G V G + VR
Sbjct: 776 FGFVEYRKPEQAQKALKQLQGHVVDGHKLEVR 807
>BC002625-1|AAH02625.1| 285|Homo sapiens heterogeneous nuclear
ribonucleoprotein A/B protein.
Length = 285
Score = 31.1 bits (67), Expect = 3.5
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +3
Query: 132 MKQKSTAHLRIYVGALSDNTTVEELYDYFIQYGKIDGI 245
M K +I+VG L+ T E++ +YF ++G+I+ I
Sbjct: 146 MAMKKDPVKKIFVGGLNPEATEEKIREYFGEFGEIEAI 183
Score = 30.3 bits (65), Expect = 6.2
Identities = 12/39 (30%), Positives = 26/39 (66%)
Frame = +3
Query: 120 DRIDMKQKSTAHLRIYVGALSDNTTVEELYDYFIQYGKI 236
D+I+ + +++VG LS +T+ ++L DYF ++G++
Sbjct: 58 DQINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEV 96
>BC001616-1|AAH01616.1| 285|Homo sapiens heterogeneous nuclear
ribonucleoprotein A/B protein.
Length = 285
Score = 31.1 bits (67), Expect = 3.5
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +3
Query: 132 MKQKSTAHLRIYVGALSDNTTVEELYDYFIQYGKIDGI 245
M K +I+VG L+ T E++ +YF ++G+I+ I
Sbjct: 146 MAMKKDPVKKIFVGGLNPEATEEKIREYFGEFGEIEAI 183
Score = 30.3 bits (65), Expect = 6.2
Identities = 12/39 (30%), Positives = 26/39 (66%)
Frame = +3
Query: 120 DRIDMKQKSTAHLRIYVGALSDNTTVEELYDYFIQYGKI 236
D+I+ + +++VG LS +T+ ++L DYF ++G++
Sbjct: 58 DQINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEV 96
>AY678451-1|AAV97647.1| 454|Homo sapiens DAZAP1/MEF2D fusion
protein protein.
Length = 454
Score = 31.1 bits (67), Expect = 3.5
Identities = 14/34 (41%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Frame = +3
Query: 159 RIYVGALSDNTTVEELYDYFIQYGK-IDGIIVNE 257
+++VG L +TT E L YF QYG+ +D +I+ +
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKD 44
>AY633610-1|AAV33303.1| 374|Homo sapiens aging-associated gene 7
protein protein.
Length = 374
Score = 31.1 bits (67), Expect = 3.5
Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +3
Query: 135 KQKSTAHLRIYVGALSDNTTVEELYDYFIQYGKI-DGIIVNEI 260
K+ ++ H ++VG LS T E++ F +GKI D +V ++
Sbjct: 90 KKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDM 132
>AY453824-1|AAR17782.1| 298|Homo sapiens CArG binding factor
protein.
Length = 298
Score = 31.1 bits (67), Expect = 3.5
Identities = 11/29 (37%), Positives = 22/29 (75%)
Frame = +3
Query: 159 RIYVGALSDNTTVEELYDYFIQYGKIDGI 245
+++VG LS +T+ E++ +YF +G+I+ I
Sbjct: 112 KVFVGGLSPDTSEEQIKEYFGAFGEIENI 140
>AK223425-1|BAD97145.1| 332|Homo sapiens heterogeneous nuclear
ribonucleoprotein AB isoform a variant protein.
Length = 332
Score = 31.1 bits (67), Expect = 3.5
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +3
Query: 132 MKQKSTAHLRIYVGALSDNTTVEELYDYFIQYGKIDGI 245
M K +I+VG L+ T E++ +YF ++G+I+ I
Sbjct: 146 MAMKKDPVKKIFVGGLNPEATEEKIREYFGEFGEIEAI 183
Score = 30.3 bits (65), Expect = 6.2
Identities = 12/39 (30%), Positives = 26/39 (66%)
Frame = +3
Query: 120 DRIDMKQKSTAHLRIYVGALSDNTTVEELYDYFIQYGKI 236
D+I+ + +++VG LS +T+ ++L DYF ++G++
Sbjct: 58 DQINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEV 96
>AK097657-1|BAC05134.1| 332|Homo sapiens protein ( Homo sapiens
cDNA FLJ40338 fis, clone TESTI2032067, highly similar to
Rattus norvegicus mRNA for type A/B hnRNP protein p40.
).
Length = 332
Score = 31.1 bits (67), Expect = 3.5
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +3
Query: 132 MKQKSTAHLRIYVGALSDNTTVEELYDYFIQYGKIDGI 245
M K +I+VG L+ T E++ +YF ++G+I+ I
Sbjct: 146 MAMKKDPVKKIFVGGLNPEATEEKIREYFGEFGEIEAI 183
Score = 30.3 bits (65), Expect = 6.2
Identities = 12/39 (30%), Positives = 26/39 (66%)
Frame = +3
Query: 120 DRIDMKQKSTAHLRIYVGALSDNTTVEELYDYFIQYGKI 236
D+I+ + +++VG LS +T+ ++L DYF ++G++
Sbjct: 58 DQINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEV 96
>AF181719-1|AAF78364.1| 407|Homo sapiens DAZ associated protein 1
protein.
Length = 407
Score = 31.1 bits (67), Expect = 3.5
Identities = 14/34 (41%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Frame = +3
Query: 159 RIYVGALSDNTTVEELYDYFIQYGK-IDGIIVNE 257
+++VG L +TT E L YF QYG+ +D +I+ +
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKD 44
>AC124016-2|AAY40914.1| 420|Homo sapiens unknown protein.
Length = 420
Score = 31.1 bits (67), Expect = 3.5
Identities = 11/29 (37%), Positives = 22/29 (75%)
Frame = +3
Query: 159 RIYVGALSDNTTVEELYDYFIQYGKIDGI 245
+++VG LS +T+ E++ +YF +G+I+ I
Sbjct: 234 KVFVGGLSPDTSEEQIKEYFGAFGEIENI 262
>AB066484-1|BAB62188.1| 244|Homo sapiens JKTBP1delta6 protein.
Length = 244
Score = 31.1 bits (67), Expect = 3.5
Identities = 11/29 (37%), Positives = 22/29 (75%)
Frame = +3
Query: 159 RIYVGALSDNTTVEELYDYFIQYGKIDGI 245
+++VG LS +T+ E++ +YF +G+I+ I
Sbjct: 115 KVFVGGLSPDTSEEQIKEYFGAFGEIENI 143
>AB017019-1|BAA75241.1| 420|Homo sapiens JKTBP2 protein.
Length = 420
Score = 31.1 bits (67), Expect = 3.5
Identities = 11/29 (37%), Positives = 22/29 (75%)
Frame = +3
Query: 159 RIYVGALSDNTTVEELYDYFIQYGKIDGI 245
+++VG LS +T+ E++ +YF +G+I+ I
Sbjct: 234 KVFVGGLSPDTSEEQIKEYFGAFGEIENI 262
>AB017018-2|BAA75240.1| 301|Homo sapiens JKTBP1 protein.
Length = 301
Score = 31.1 bits (67), Expect = 3.5
Identities = 11/29 (37%), Positives = 22/29 (75%)
Frame = +3
Query: 159 RIYVGALSDNTTVEELYDYFIQYGKIDGI 245
+++VG LS +T+ E++ +YF +G+I+ I
Sbjct: 115 KVFVGGLSPDTSEEQIKEYFGAFGEIENI 143
>AB017018-1|BAA75239.1| 420|Homo sapiens JKTBP2 protein.
Length = 420
Score = 31.1 bits (67), Expect = 3.5
Identities = 11/29 (37%), Positives = 22/29 (75%)
Frame = +3
Query: 159 RIYVGALSDNTTVEELYDYFIQYGKIDGI 245
+++VG LS +T+ E++ +YF +G+I+ I
Sbjct: 234 KVFVGGLSPDTSEEQIKEYFGAFGEIENI 262
>AB014582-1|BAA31657.2| 973|Homo sapiens KIAA0682 protein protein.
Length = 973
Score = 31.1 bits (67), Expect = 3.5
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +2
Query: 260 FGFVQFAEESSAQDAIKKANGSVFKGKNIPVR 355
FGFV++ + AQ A+K+ G V G + VR
Sbjct: 789 FGFVEYRKPEQAQKALKQLQGHVVDGHKLEVR 820
>X75314-1|CAA53063.1| 229|Homo sapiens SEB4D protein.
Length = 229
Score = 30.7 bits (66), Expect = 4.7
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +3
Query: 138 QKSTAHLRIYVGALSDNTTVEELYDYFIQYGKIDGIIV 251
QK T +I+VG L +TT L YF +G I+ +V
Sbjct: 18 QKGTTFTKIFVGGLPYHTTDASLRKYFEGFGDIEEAVV 55
>BC018711-1|AAH18711.1| 216|Homo sapiens RBM38 protein protein.
Length = 216
Score = 30.7 bits (66), Expect = 4.7
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +3
Query: 138 QKSTAHLRIYVGALSDNTTVEELYDYFIQYGKIDGIIV 251
QK T +I+VG L +TT L YF +G I+ +V
Sbjct: 5 QKDTTFTKIFVGGLPYHTTDASLRKYFEGFGDIEEAVV 42
>BC000488-1|AAH00488.1| 669|Homo sapiens RBM14 protein protein.
Length = 669
Score = 30.7 bits (66), Expect = 4.7
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +2
Query: 257 NFGFVQFAEESSAQDAIKKANGSVFKGKNIPVRAAT 364
++ FV +E+ A+ AI + NG KGK I V +T
Sbjct: 113 DYAFVHMEKEADAKAAIAQLNGKEVKGKRINVELST 148
>AK222830-1|BAD96550.1| 669|Homo sapiens RNA binding motif protein
14 variant protein.
Length = 669
Score = 30.7 bits (66), Expect = 4.7
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +2
Query: 257 NFGFVQFAEESSAQDAIKKANGSVFKGKNIPVRAAT 364
++ FV +E+ A+ AI + NG KGK I V +T
Sbjct: 113 DYAFVHMEKEADAKAAIAQLNGKEVKGKRINVELST 148
>AF432218-1|AAL99924.1| 216|Homo sapiens CLL-associated antigen
KW-5 protein.
Length = 216
Score = 30.7 bits (66), Expect = 4.7
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +3
Query: 138 QKSTAHLRIYVGALSDNTTVEELYDYFIQYGKIDGIIV 251
QK T +I+VG L +TT L YF +G I+ +V
Sbjct: 5 QKDTTFTKIFVGGLPYHTTDASLRKYFEGFGDIEEAVV 42
>AF315633-1|AAK77962.1| 156|Homo sapiens coactivator modulator
protein.
Length = 156
Score = 30.7 bits (66), Expect = 4.7
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +2
Query: 257 NFGFVQFAEESSAQDAIKKANGSVFKGKNIPVRAAT 364
++ FV +E+ A+ AI + NG KGK I V +T
Sbjct: 113 DYAFVHMEKEADAKAAIAQLNGKEVKGKRINVELST 148
>AF315632-1|AAK77961.1| 669|Homo sapiens coactivator activator
protein.
Length = 669
Score = 30.7 bits (66), Expect = 4.7
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +2
Query: 257 NFGFVQFAEESSAQDAIKKANGSVFKGKNIPVRAAT 364
++ FV +E+ A+ AI + NG KGK I V +T
Sbjct: 113 DYAFVHMEKEADAKAAIAQLNGKEVKGKRINVELST 148
>AF080561-1|AAC64058.1| 669|Homo sapiens SYT interacting protein
SIP protein.
Length = 669
Score = 30.7 bits (66), Expect = 4.7
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +2
Query: 257 NFGFVQFAEESSAQDAIKKANGSVFKGKNIPVRAAT 364
++ FV +E+ A+ AI + NG KGK I V +T
Sbjct: 113 DYAFVHMEKEADAKAAIAQLNGKEVKGKRINVELST 148
>AB209007-1|BAD92244.1| 552|Homo sapiens RNA binding motif protein
14 variant protein.
Length = 552
Score = 30.7 bits (66), Expect = 4.7
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +2
Query: 257 NFGFVQFAEESSAQDAIKKANGSVFKGKNIPVRAAT 364
++ FV +E+ A+ AI + NG KGK I V +T
Sbjct: 47 DYAFVHMEKEADAKAAIAQLNGKEVKGKRINVELST 82
>U76713-1|AAC50956.1| 331|Homo sapiens ABBP-1 protein.
Length = 331
Score = 30.3 bits (65), Expect = 6.2
Identities = 12/39 (30%), Positives = 26/39 (66%)
Frame = +3
Query: 120 DRIDMKQKSTAHLRIYVGALSDNTTVEELYDYFIQYGKI 236
D+I+ + +++VG LS +T+ ++L DYF ++G++
Sbjct: 56 DQINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEV 94
>U75686-1|AAB97309.1| 644|Homo sapiens polyadenylate binding
protein protein.
Length = 644
Score = 30.3 bits (65), Expect = 6.2
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +2
Query: 260 FGFVQFAEESSAQDAIKKANGSVFKGKNIPVRAATDKSE 376
FGFV + + A A+++ NG GK I V A K E
Sbjct: 233 FGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVE 271
>U33818-1|AAC50350.1| 644|Homo sapiens inducible poly(A)-binding
protein protein.
Length = 644
Score = 30.3 bits (65), Expect = 6.2
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +2
Query: 260 FGFVQFAEESSAQDAIKKANGSVFKGKNIPVRAATDKSE 376
FGFV + + A A+++ NG GK I V A K E
Sbjct: 233 FGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVE 271
>M65028-1|AAA36575.1| 284|Homo sapiens hnRNP type A/B protein
protein.
Length = 284
Score = 30.3 bits (65), Expect = 6.2
Identities = 12/39 (30%), Positives = 26/39 (66%)
Frame = +3
Query: 120 DRIDMKQKSTAHLRIYVGALSDNTTVEELYDYFIQYGKI 236
D+I+ + +++VG LS +T+ ++L DYF ++G++
Sbjct: 56 DQINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEV 94
>L41887-1|AAA88098.1| 238|Homo sapiens splicing factor,
arginine/serine-rich 7 protein.
Length = 238
Score = 30.3 bits (65), Expect = 6.2
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +2
Query: 260 FGFVQFAEESSAQDAIKKANGSVFKGKNIPVRAAT 364
F FV+F + A+DA++ +G V G + V +T
Sbjct: 49 FAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELST 83
>L22253-1|AAA35495.1| 238|Homo sapiens 9G8 splicing factor protein.
Length = 238
Score = 30.3 bits (65), Expect = 6.2
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +2
Query: 260 FGFVQFAEESSAQDAIKKANGSVFKGKNIPVRAAT 364
F FV+F + A+DA++ +G V G + V +T
Sbjct: 49 FAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELST 83
>D12799-1|BAA02244.1| 193|Homo sapiens polyadenylate binding
protein II protein.
Length = 193
Score = 30.3 bits (65), Expect = 6.2
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +2
Query: 260 FGFVQFAEESSAQDAIKKANGSVFKGKNIPVRAATDKSE 376
FGFV + + A A+++ NG GK I V A K E
Sbjct: 44 FGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVE 82
>BT006745-1|AAP35391.1| 238|Homo sapiens splicing factor,
arginine/serine-rich 7, 35kDa protein.
Length = 238
Score = 30.3 bits (65), Expect = 6.2
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +2
Query: 260 FGFVQFAEESSAQDAIKKANGSVFKGKNIPVRAAT 364
F FV+F + A+DA++ +G V G + V +T
Sbjct: 49 FAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELST 83
>BC094755-1|AAH94755.1| 660|Homo sapiens PABPC4 protein protein.
Length = 660
Score = 30.3 bits (65), Expect = 6.2
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +2
Query: 260 FGFVQFAEESSAQDAIKKANGSVFKGKNIPVRAATDKSE 376
FGFV + + A A+++ NG GK I V A K E
Sbjct: 233 FGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVE 271
>BC071591-1|AAH71591.1| 660|Homo sapiens PABPC4 protein protein.
Length = 660
Score = 30.3 bits (65), Expect = 6.2
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +2
Query: 260 FGFVQFAEESSAQDAIKKANGSVFKGKNIPVRAATDKSE 376
FGFV + + A A+++ NG GK I V A K E
Sbjct: 233 FGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVE 271
>BC065540-1|AAH65540.1| 631|Homo sapiens PABPC4 protein protein.
Length = 631
Score = 30.3 bits (65), Expect = 6.2
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +2
Query: 260 FGFVQFAEESSAQDAIKKANGSVFKGKNIPVRAATDKSE 376
FGFV + + A A+++ NG GK I V A K E
Sbjct: 233 FGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVE 271
>BC022328-1|AAH22328.1| 238|Homo sapiens splicing factor,
arginine/serine-rich 7, 35kDa protein.
Length = 238
Score = 30.3 bits (65), Expect = 6.2
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +2
Query: 260 FGFVQFAEESSAQDAIKKANGSVFKGKNIPVRAAT 364
F FV+F + A+DA++ +G V G + V +T
Sbjct: 49 FAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELST 83
>BC017908-1|AAH17908.1| 238|Homo sapiens splicing factor,
arginine/serine-rich 7, 35kDa protein.
Length = 238
Score = 30.3 bits (65), Expect = 6.2
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +2
Query: 260 FGFVQFAEESSAQDAIKKANGSVFKGKNIPVRAAT 364
F FV+F + A+DA++ +G V G + V +T
Sbjct: 49 FAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELST 83
>BC017369-1|AAH17369.1| 238|Homo sapiens splicing factor,
arginine/serine-rich 7, 35kDa protein.
Length = 238
Score = 30.3 bits (65), Expect = 6.2
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +2
Query: 260 FGFVQFAEESSAQDAIKKANGSVFKGKNIPVRAAT 364
F FV+F + A+DA++ +G V G + V +T
Sbjct: 49 FAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELST 83
>BC015944-1|AAH15944.1| 214|Homo sapiens TIA1 protein protein.
Length = 214
Score = 30.3 bits (65), Expect = 6.2
Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +3
Query: 138 QKSTAHLRIYVGALSDNTTVEELYDYFIQYGKI-DGIIVNEI 260
Q+S H ++VG LS T E++ F +G+I D +V ++
Sbjct: 100 QRSQDHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDM 141
>BC000997-1|AAH00997.1| 238|Homo sapiens splicing factor,
arginine/serine-rich 7, 35kDa protein.
Length = 238
Score = 30.3 bits (65), Expect = 6.2
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +2
Query: 260 FGFVQFAEESSAQDAIKKANGSVFKGKNIPVRAAT 364
F FV+F + A+DA++ +G V G + V +T
Sbjct: 49 FAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELST 83
>AY513287-1|AAT08040.1| 238|Homo sapiens aging-associated protein 3
protein.
Length = 238
Score = 30.3 bits (65), Expect = 6.2
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +2
Query: 260 FGFVQFAEESSAQDAIKKANGSVFKGKNIPVRAAT 364
F FV+F + A+DA++ +G V G + V +T
Sbjct: 49 FAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELST 83
>AY166860-1|AAN87842.1| 238|Homo sapiens arginine/serine-rich
splicing factor 7 type B protein.
Length = 238
Score = 30.3 bits (65), Expect = 6.2
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +2
Query: 260 FGFVQFAEESSAQDAIKKANGSVFKGKNIPVRAAT 364
F FV+F + A+DA++ +G V G + V +T
Sbjct: 49 FAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELST 83
>AL845289-3|CAI12300.1| 644|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibletaining 6 protein.
Length = 644
Score = 30.3 bits (65), Expect = 6.2
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +2
Query: 260 FGFVQFAEESSAQDAIKKANGSVFKGKNIPVRAATDKSE 376
FGFV + + A A+++ NG GK I V A K E
Sbjct: 233 FGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVE 271
>AL845289-2|CAI12298.1| 660|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibleseudogene protein.
Length = 660
Score = 30.3 bits (65), Expect = 6.2
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +2
Query: 260 FGFVQFAEESSAQDAIKKANGSVFKGKNIPVRAATDKSE 376
FGFV + + A A+++ NG GK I V A K E
Sbjct: 233 FGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVE 271
>AL845289-1|CAI12299.1| 615|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibleeudogene protein.
Length = 615
Score = 30.3 bits (65), Expect = 6.2
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +2
Query: 260 FGFVQFAEESSAQDAIKKANGSVFKGKNIPVRAATDKSE 376
FGFV + + A A+++ NG GK I V A K E
Sbjct: 233 FGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVE 271
>AL365277-15|CAI16425.1| 410|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (induciblela) protein.
Length = 410
Score = 30.3 bits (65), Expect = 6.2
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +2
Query: 260 FGFVQFAEESSAQDAIKKANGSVFKGKNIPVRAATDKSE 376
FGFV + + A A+++ NG GK I V A K E
Sbjct: 12 FGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVE 50
>AL365277-4|CAI16414.1| 644|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (induciblepeptide, antigen CD29 includes
protein.
Length = 644
Score = 30.3 bits (65), Expect = 6.2
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +2
Query: 260 FGFVQFAEESSAQDAIKKANGSVFKGKNIPVRAATDKSE 376
FGFV + + A A+++ NG GK I V A K E
Sbjct: 233 FGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVE 271
>AL365277-3|CAI16412.1| 660|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducible) pseudogene protein.
Length = 660
Score = 30.3 bits (65), Expect = 6.2
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +2
Query: 260 FGFVQFAEESSAQDAIKKANGSVFKGKNIPVRAATDKSE 376
FGFV + + A A+++ NG GK I V A K E
Sbjct: 233 FGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVE 271
>AL365277-2|CAI16413.1| 615|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (induciblely, member 5 protein.
Length = 615
Score = 30.3 bits (65), Expect = 6.2
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +2
Query: 260 FGFVQFAEESSAQDAIKKANGSVFKGKNIPVRAATDKSE 376
FGFV + + A A+++ NG GK I V A K E
Sbjct: 233 FGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVE 271
>AK091425-1|BAC03661.1| 137|Homo sapiens protein ( Homo sapiens
cDNA FLJ34106 fis, clone FCBBF3008073, highly similar to
SPLICING FACTOR, ARGININE/SERINE-RICH 7. ).
Length = 137
Score = 30.3 bits (65), Expect = 6.2
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +2
Query: 260 FGFVQFAEESSAQDAIKKANGSVFKGKNIPVRAAT 364
F FV+F + A+DA++ +G V G + V +T
Sbjct: 49 FAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELST 83
>AC074366-2|AAX93102.1| 238|Homo sapiens unknown protein.
Length = 238
Score = 30.3 bits (65), Expect = 6.2
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +2
Query: 260 FGFVQFAEESSAQDAIKKANGSVFKGKNIPVRAAT 364
F FV+F + A+DA++ +G V G + V +T
Sbjct: 49 FAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELST 83
>AC016700-3|AAX93193.1| 386|Homo sapiens unknown protein.
Length = 386
Score = 30.3 bits (65), Expect = 6.2
Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +3
Query: 138 QKSTAHLRIYVGALSDNTTVEELYDYFIQYGKI-DGIIVNEI 260
Q+S H ++VG LS T E++ F +G+I D +V ++
Sbjct: 100 QRSQDHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDM 141
>AB209211-1|BAD92448.1| 464|Homo sapiens TIA1 protein variant
protein.
Length = 464
Score = 30.3 bits (65), Expect = 6.2
Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +3
Query: 138 QKSTAHLRIYVGALSDNTTVEELYDYFIQYGKI-DGIIVNEI 260
Q+S H ++VG LS T E++ F +G+I D +V ++
Sbjct: 138 QRSQDHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDM 179
>X75755-1|CAA53383.1| 221|Homo sapiens PR264/SC35 protein.
Length = 221
Score = 29.9 bits (64), Expect = 8.2
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +2
Query: 260 FGFVQFAEESSAQDAIKKANGSVFKGKNIPVRAA 361
F FV+F ++ A+DA+ +G+V G+ + V+ A
Sbjct: 57 FAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMA 90
>X62447-1|CAA44307.1| 221|Homo sapiens PR 264 protein.
Length = 221
Score = 29.9 bits (64), Expect = 8.2
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +2
Query: 260 FGFVQFAEESSAQDAIKKANGSVFKGKNIPVRAA 361
F FV+F ++ A+DA+ +G+V G+ + V+ A
Sbjct: 57 FAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMA 90
>X03910-1|CAA27544.1| 225|Homo sapiens protein ( Human mRNA for
hnRNP C protein cross-reacting with C1 and C2 hnRNP
core proteins. ).
Length = 225
Score = 29.9 bits (64), Expect = 8.2
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +3
Query: 132 MKQKSTAHLRIYVGALSDNTTVEELYDYFIQYGKIDGI 245
MK K +I+VG LS +T E++ +YF +G+++ I
Sbjct: 165 MKTKEPVK-KIFVGGLSPDTPEEKIREYFGGFGEVESI 201
>M94630-1|AAA35781.1| 328|Homo sapiens DNA-binding protein protein.
Length = 328
Score = 29.9 bits (64), Expect = 8.2
Identities = 10/26 (38%), Positives = 21/26 (80%)
Frame = +3
Query: 159 RIYVGALSDNTTVEELYDYFIQYGKI 236
++++G LS +TT ++L DYF ++G++
Sbjct: 77 KMFIGGLSWDTTKKDLKDYFSKFGEV 102
Score = 29.9 bits (64), Expect = 8.2
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +3
Query: 132 MKQKSTAHLRIYVGALSDNTTVEELYDYFIQYGKIDGI 245
MK K +I+VG LS +T E++ +YF +G+++ I
Sbjct: 154 MKTKEPVK-KIFVGGLSPDTPEEKIREYFGGFGEVESI 190
>M90104-1|AAA60306.1| 221|Homo sapiens splicing factor protein.
Length = 221
Score = 29.9 bits (64), Expect = 8.2
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +2
Query: 260 FGFVQFAEESSAQDAIKKANGSVFKGKNIPVRAA 361
F FV+F ++ A+DA+ +G+V G+ + V+ A
Sbjct: 57 FAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMA 90
>D55674-1|BAA09525.1| 355|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (hnRNP D) protein.
Length = 355
Score = 29.9 bits (64), Expect = 8.2
Identities = 10/26 (38%), Positives = 21/26 (80%)
Frame = +3
Query: 159 RIYVGALSDNTTVEELYDYFIQYGKI 236
++++G LS +TT ++L DYF ++G++
Sbjct: 98 KMFIGGLSWDTTKKDLKDYFSKFGEV 123
Score = 29.9 bits (64), Expect = 8.2
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +3
Query: 132 MKQKSTAHLRIYVGALSDNTTVEELYDYFIQYGKIDGI 245
MK K +I+VG LS +T E++ +YF +G+++ I
Sbjct: 175 MKTKEPVK-KIFVGGLSPDTPEEKIREYFGGFGEVESI 211
>D55673-1|BAA09524.1| 215|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (hnRNP D) protein.
Length = 215
Score = 29.9 bits (64), Expect = 8.2
Identities = 10/26 (38%), Positives = 21/26 (80%)
Frame = +3
Query: 159 RIYVGALSDNTTVEELYDYFIQYGKI 236
++++G LS +TT ++L DYF ++G++
Sbjct: 7 KMFIGGLSWDTTKKDLKDYFSKFGEV 32
Score = 29.9 bits (64), Expect = 8.2
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +3
Query: 132 MKQKSTAHLRIYVGALSDNTTVEELYDYFIQYGKIDGI 245
MK K +I+VG LS +T E++ +YF +G+++ I
Sbjct: 84 MKTKEPVK-KIFVGGLSPDTPEEKIREYFGGFGEVESI 120
>D55672-1|BAA09523.1| 306|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (hnRNP D) protein.
Length = 306
Score = 29.9 bits (64), Expect = 8.2
Identities = 10/26 (38%), Positives = 21/26 (80%)
Frame = +3
Query: 159 RIYVGALSDNTTVEELYDYFIQYGKI 236
++++G LS +TT ++L DYF ++G++
Sbjct: 98 KMFIGGLSWDTTKKDLKDYFSKFGEV 123
Score = 29.9 bits (64), Expect = 8.2
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +3
Query: 132 MKQKSTAHLRIYVGALSDNTTVEELYDYFIQYGKIDGI 245
MK K +I+VG LS +T E++ +YF +G+++ I
Sbjct: 175 MKTKEPVK-KIFVGGLSPDTPEEKIREYFGGFGEVESI 211
>D55671-1|BAA09522.1| 267|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (hnRNP D) protein.
Length = 267
Score = 29.9 bits (64), Expect = 8.2
Identities = 10/26 (38%), Positives = 21/26 (80%)
Frame = +3
Query: 159 RIYVGALSDNTTVEELYDYFIQYGKI 236
++++G LS +TT ++L DYF ++G++
Sbjct: 10 KMFIGGLSWDTTKKDLKDYFSKFGEV 35
Score = 29.9 bits (64), Expect = 8.2
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +3
Query: 132 MKQKSTAHLRIYVGALSDNTTVEELYDYFIQYGKIDGI 245
MK K +I+VG LS +T E++ +YF +G+++ I
Sbjct: 87 MKTKEPVK-KIFVGGLSPDTPEEKIREYFGGFGEVESI 123
>BT007250-1|AAP35914.1| 221|Homo sapiens splicing factor,
arginine/serine-rich 2 protein.
Length = 221
Score = 29.9 bits (64), Expect = 8.2
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +2
Query: 260 FGFVQFAEESSAQDAIKKANGSVFKGKNIPVRAA 361
F FV+F ++ A+DA+ +G+V G+ + V+ A
Sbjct: 57 FAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMA 90
>BC070086-1|AAH70086.1| 221|Homo sapiens splicing factor,
arginine/serine-rich 2 protein.
Length = 221
Score = 29.9 bits (64), Expect = 8.2
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +2
Query: 260 FGFVQFAEESSAQDAIKKANGSVFKGKNIPVRAA 361
F FV+F ++ A+DA+ +G+V G+ + V+ A
Sbjct: 57 FAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMA 90
>BC026015-1|AAH26015.1| 306|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (AU-rich element RNA binding protein
protein.
Length = 306
Score = 29.9 bits (64), Expect = 8.2
Identities = 10/26 (38%), Positives = 21/26 (80%)
Frame = +3
Query: 159 RIYVGALSDNTTVEELYDYFIQYGKI 236
++++G LS +TT ++L DYF ++G++
Sbjct: 98 KMFIGGLSWDTTKKDLKDYFSKFGEV 123
Score = 29.9 bits (64), Expect = 8.2
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +3
Query: 132 MKQKSTAHLRIYVGALSDNTTVEELYDYFIQYGKIDGI 245
MK K +I+VG LS +T E++ +YF +G+++ I
Sbjct: 175 MKTKEPVK-KIFVGGLSPDTPEEKIREYFGGFGEVESI 211
>BC023977-1|AAH23977.1| 306|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (AU-rich element RNA binding protein
protein.
Length = 306
Score = 29.9 bits (64), Expect = 8.2
Identities = 10/26 (38%), Positives = 21/26 (80%)
Frame = +3
Query: 159 RIYVGALSDNTTVEELYDYFIQYGKI 236
++++G LS +TT ++L DYF ++G++
Sbjct: 98 KMFIGGLSWDTTKKDLKDYFSKFGEV 123
Score = 29.9 bits (64), Expect = 8.2
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +3
Query: 132 MKQKSTAHLRIYVGALSDNTTVEELYDYFIQYGKIDGI 245
MK K +I+VG LS +T E++ +YF +G+++ I
Sbjct: 175 MKTKEPVK-KIFVGGLSPDTPEEKIREYFGGFGEVESI 211
>BC009348-1|AAH09348.1| 686|Homo sapiens cirrhosis, autosomal
recessive 1A (cirhin) protein.
Length = 686
Score = 29.9 bits (64), Expect = 8.2
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = -1
Query: 448 HLPFECLLVQQQVALLDISLR---FQHLAFISCGSDRDIFSFEYA 323
HL F L+ + +V D +LR F H ISC R + F++A
Sbjct: 308 HLVFRPLMEKVEVKNYDAALRKITFPHRCLISCSKKRQLLLFQFA 352
>BC002401-1|AAH02401.1| 355|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (AU-rich element RNA binding protein
protein.
Length = 355
Score = 29.9 bits (64), Expect = 8.2
Identities = 10/26 (38%), Positives = 21/26 (80%)
Frame = +3
Query: 159 RIYVGALSDNTTVEELYDYFIQYGKI 236
++++G LS +TT ++L DYF ++G++
Sbjct: 98 KMFIGGLSWDTTKKDLKDYFSKFGEV 123
Score = 29.9 bits (64), Expect = 8.2
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +3
Query: 132 MKQKSTAHLRIYVGALSDNTTVEELYDYFIQYGKIDGI 245
MK K +I+VG LS +T E++ +YF +G+++ I
Sbjct: 175 MKTKEPVK-KIFVGGLSPDTPEEKIREYFGGFGEVESI 211
>BC001303-1|AAH01303.1| 221|Homo sapiens SFRS2 protein protein.
Length = 221
Score = 29.9 bits (64), Expect = 8.2
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +2
Query: 260 FGFVQFAEESSAQDAIKKANGSVFKGKNIPVRAA 361
F FV+F ++ A+DA+ +G+V G+ + V+ A
Sbjct: 57 FAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMA 90
>BC000339-1|AAH00339.1| 221|Homo sapiens SFRS2 protein protein.
Length = 221
Score = 29.9 bits (64), Expect = 8.2
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +2
Query: 260 FGFVQFAEESSAQDAIKKANGSVFKGKNIPVRAA 361
F FV+F ++ A+DA+ +G+V G+ + V+ A
Sbjct: 57 FAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMA 90
>BC000167-1|AAH00167.1| 533|Homo sapiens Unknown (protein for
IMAGE:2900671) protein.
Length = 533
Score = 29.9 bits (64), Expect = 8.2
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = -1
Query: 448 HLPFECLLVQQQVALLDISLR---FQHLAFISCGSDRDIFSFEYA 323
HL F L+ + +V D +LR F H ISC R + F++A
Sbjct: 155 HLVFRPLMEKVEVKNYDAALRKITFPHRCLISCSKKRQLLLFQFA 199
>AK223252-1|BAD96972.1| 221|Homo sapiens splicing factor,
arginine/serine-rich 2 variant protein.
Length = 221
Score = 29.9 bits (64), Expect = 8.2
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +2
Query: 260 FGFVQFAEESSAQDAIKKANGSVFKGKNIPVRAA 361
F FV+F ++ A+DA+ +G+V G+ + V+ A
Sbjct: 57 FAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMA 90
>AK092489-1|BAC03903.1| 201|Homo sapiens protein ( Homo sapiens
cDNA FLJ35170 fis, clone PLACE6012942, highly similar to
SPLICING FACTOR, ARGININE/SERINE-RICH 2. ).
Length = 201
Score = 29.9 bits (64), Expect = 8.2
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +2
Query: 260 FGFVQFAEESSAQDAIKKANGSVFKGKNIPVRAA 361
F FV+F ++ A+DA+ +G+V G+ + V+ A
Sbjct: 57 FAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMA 90
>AK074795-1|BAC11214.1| 686|Homo sapiens protein ( Homo sapiens
cDNA FLJ90314 fis, clone NT2RP2001469, weakly similar to
VEGETATIBLE INCOMPATIBILITY PROTEIN HET-E-1. ).
Length = 686
Score = 29.9 bits (64), Expect = 8.2
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = -1
Query: 448 HLPFECLLVQQQVALLDISLR---FQHLAFISCGSDRDIFSFEYA 323
HL F L+ + +V D +LR F H ISC R + F++A
Sbjct: 308 HLVFRPLMEKVEVKNYDAALRKITFPHRCLISCSKKRQLLLFQFA 352
>AK027675-1|BAB55287.1| 686|Homo sapiens protein ( Homo sapiens
cDNA FLJ14769 fis, clone NT2RP3004189, weakly similar to
VEGETATIBLE INCOMPATIBILITY PROTEIN HET-E-1. ).
Length = 686
Score = 29.9 bits (64), Expect = 8.2
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = -1
Query: 448 HLPFECLLVQQQVALLDISLR---FQHLAFISCGSDRDIFSFEYA 323
HL F L+ + +V D +LR F H ISC R + F++A
Sbjct: 308 HLVFRPLMEKVEVKNYDAALRKITFPHRCLISCSKKRQLLLFQFA 352
>AK027634-1|BAB55251.1| 686|Homo sapiens protein ( Homo sapiens
cDNA FLJ14728 fis, clone NT2RP3001857, weakly similar to
VEGETATIBLE INCOMPATIBILITY PROTEIN HET-E-1. ).
Length = 686
Score = 29.9 bits (64), Expect = 8.2
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = -1
Query: 448 HLPFECLLVQQQVALLDISLR---FQHLAFISCGSDRDIFSFEYA 323
HL F L+ + +V D +LR F H ISC R + F++A
Sbjct: 308 HLVFRPLMEKVEVKNYDAALRKITFPHRCLISCSKKRQLLLFQFA 352
>AK027445-1|BAB55116.1| 475|Homo sapiens protein ( Homo sapiens
cDNA FLJ14539 fis, clone NT2RM2001345, weakly similar to
VEGETATIBLE INCOMPATIBILITY PROTEIN HET-E-1. ).
Length = 475
Score = 29.9 bits (64), Expect = 8.2
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = -1
Query: 448 HLPFECLLVQQQVALLDISLR---FQHLAFISCGSDRDIFSFEYA 323
HL F L+ + +V D +LR F H ISC R + F++A
Sbjct: 212 HLVFRPLMEKVEVKNYDAALRKITFPHRCLISCSKKRQLLLFQFA 256
>AK027419-1|BAB55100.1| 505|Homo sapiens protein ( Homo sapiens
cDNA FLJ14513 fis, clone NT2RM1000702, weakly similar to
PUTATIVE SERINE/THREONINE-PROTEIN KINASE PKWA (EC
2.7.1.-). ).
Length = 505
Score = 29.9 bits (64), Expect = 8.2
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = -1
Query: 448 HLPFECLLVQQQVALLDISLR---FQHLAFISCGSDRDIFSFEYA 323
HL F L+ + +V D +LR F H ISC R + F++A
Sbjct: 127 HLVFRPLMEKVEVKNYDAALRKITFPHRCLISCSKKRQLLLFQFA 171
>AF039575-1|AAB96683.1| 298|Homo sapiens heterogeneous nuclear
ribonucleoprotein D0B protein.
Length = 298
Score = 29.9 bits (64), Expect = 8.2
Identities = 10/26 (38%), Positives = 21/26 (80%)
Frame = +3
Query: 159 RIYVGALSDNTTVEELYDYFIQYGKI 236
++++G LS +TT ++L DYF ++G++
Sbjct: 90 KMFIGGLSWDTTKKDLKDYFSKFGEV 115
Score = 29.9 bits (64), Expect = 8.2
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +3
Query: 132 MKQKSTAHLRIYVGALSDNTTVEELYDYFIQYGKIDGI 245
MK K +I+VG LS +T E++ +YF +G+++ I
Sbjct: 167 MKTKEPVK-KIFVGGLSPDTPEEKIREYFGGFGEVESI 203
>AF026126-2|AAC23475.1| 306|Homo sapiens heterogeneous nuclear
ribonucleoprotein D protein.
Length = 306
Score = 29.9 bits (64), Expect = 8.2
Identities = 10/26 (38%), Positives = 21/26 (80%)
Frame = +3
Query: 159 RIYVGALSDNTTVEELYDYFIQYGKI 236
++++G LS +TT ++L DYF ++G++
Sbjct: 98 KMFIGGLSWDTTKKDLKDYFSKFGEV 123
Score = 29.9 bits (64), Expect = 8.2
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +3
Query: 132 MKQKSTAHLRIYVGALSDNTTVEELYDYFIQYGKIDGI 245
MK K +I+VG LS +T E++ +YF +G+++ I
Sbjct: 175 MKTKEPVK-KIFVGGLSPDTPEEKIREYFGGFGEVESI 211
>AF026126-1|AAC23474.1| 355|Homo sapiens heterogeneous nuclear
ribonucleoprotein D protein.
Length = 355
Score = 29.9 bits (64), Expect = 8.2
Identities = 10/26 (38%), Positives = 21/26 (80%)
Frame = +3
Query: 159 RIYVGALSDNTTVEELYDYFIQYGKI 236
++++G LS +TT ++L DYF ++G++
Sbjct: 98 KMFIGGLSWDTTKKDLKDYFSKFGEV 123
Score = 29.9 bits (64), Expect = 8.2
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +3
Query: 132 MKQKSTAHLRIYVGALSDNTTVEELYDYFIQYGKIDGI 245
MK K +I+VG LS +T E++ +YF +G+++ I
Sbjct: 175 MKTKEPVK-KIFVGGLSPDTPEEKIREYFGGFGEVESI 211
>AC124016-1|AAY40913.1| 355|Homo sapiens unknown protein.
Length = 355
Score = 29.9 bits (64), Expect = 8.2
Identities = 10/26 (38%), Positives = 21/26 (80%)
Frame = +3
Query: 159 RIYVGALSDNTTVEELYDYFIQYGKI 236
++++G LS +TT ++L DYF ++G++
Sbjct: 98 KMFIGGLSWDTTKKDLKDYFSKFGEV 123
Score = 29.9 bits (64), Expect = 8.2
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +3
Query: 132 MKQKSTAHLRIYVGALSDNTTVEELYDYFIQYGKIDGI 245
MK K +I+VG LS +T E++ +YF +G+++ I
Sbjct: 175 MKTKEPVK-KIFVGGLSPDTPEEKIREYFGGFGEVESI 211
>AB075868-1|BAB85574.2| 636|Homo sapiens KIAA1988 protein protein.
Length = 636
Score = 29.9 bits (64), Expect = 8.2
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = -1
Query: 448 HLPFECLLVQQQVALLDISLR---FQHLAFISCGSDRDIFSFEYA 323
HL F L+ + +V D +LR F H ISC R + F++A
Sbjct: 319 HLVFRPLMEKVEVKNYDAALRKITFPHRCLISCSKKRQLLLFQFA 363
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,859,066
Number of Sequences: 237096
Number of extensions: 1616286
Number of successful extensions: 4118
Number of sequences better than 10.0: 187
Number of HSP's better than 10.0 without gapping: 3725
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4118
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7197658880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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