Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021306
         (649 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex det...    23   3.4  
DQ325102-1|ABD14116.1|  183|Apis mellifera complementary sex det...    22   5.9  
DQ325101-1|ABD14115.1|  182|Apis mellifera complementary sex det...    22   5.9  
DQ325100-1|ABD14114.1|  183|Apis mellifera complementary sex det...    22   5.9  
DQ325099-1|ABD14113.1|  183|Apis mellifera complementary sex det...    22   5.9  
DQ325098-1|ABD14112.1|  183|Apis mellifera complementary sex det...    22   5.9  
DQ325097-1|ABD14111.1|  183|Apis mellifera complementary sex det...    22   5.9  
DQ325096-1|ABD14110.1|  183|Apis mellifera complementary sex det...    22   5.9  
DQ325095-1|ABD14109.1|  183|Apis mellifera complementary sex det...    22   5.9  
DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    22   5.9  
AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     21   7.8  

>AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex
           determiner protein.
          Length = 419

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +1

Query: 463 YDNYGNNNDHGFQEEL 510
           Y+NY NNN + + ++L
Sbjct: 330 YNNYNNNNYNNYNKKL 345


>DQ325102-1|ABD14116.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +1

Query: 463 YDNYGNNNDHGFQEEL 510
           Y+NY NNN++   ++L
Sbjct: 94  YNNYNNNNNYNNYKKL 109


>DQ325101-1|ABD14115.1|  182|Apis mellifera complementary sex
           determiner protein.
          Length = 182

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +1

Query: 463 YDNYGNNNDHGFQEEL 510
           Y+NY NNN++   ++L
Sbjct: 94  YNNYNNNNNYNNYKKL 109


>DQ325100-1|ABD14114.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +1

Query: 463 YDNYGNNNDHGFQEEL 510
           Y+NY NNN++   ++L
Sbjct: 94  YNNYNNNNNYNNYKKL 109


>DQ325099-1|ABD14113.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +1

Query: 463 YDNYGNNNDHGFQEEL 510
           Y+NY NNN++   ++L
Sbjct: 94  YNNYNNNNNYNNYKKL 109


>DQ325098-1|ABD14112.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +1

Query: 463 YDNYGNNNDHGFQEEL 510
           Y+NY NNN++   ++L
Sbjct: 94  YNNYNNNNNYNNYKKL 109


>DQ325097-1|ABD14111.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +1

Query: 463 YDNYGNNNDHGFQEEL 510
           Y+NY NNN++   ++L
Sbjct: 94  YNNYNNNNNYNNYKKL 109


>DQ325096-1|ABD14110.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +1

Query: 463 YDNYGNNNDHGFQEEL 510
           Y+NY NNN++   ++L
Sbjct: 94  YNNYNNNNNYNNYKKL 109


>DQ325095-1|ABD14109.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +1

Query: 463 YDNYGNNNDHGFQEEL 510
           Y+NY NNN++   ++L
Sbjct: 94  YNNYNNNNNYNNYKKL 109


>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 12/42 (28%), Positives = 19/42 (45%)
 Frame = -2

Query: 402 WIYRYGFNISLLSVAALTGIFFPLNTLPLAFFIASCALDSSA 277
           WI      + LL     T + F + T+P+   IA    ++SA
Sbjct: 376 WIISDRMPVFLLXTLNYTDVXFRILTMPVRDAIAGTICENSA 417


>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +3

Query: 603 RSRGPSFCDRPPINP 647
           ++R P++CDR  +NP
Sbjct: 334 QTRVPAWCDRVLLNP 348


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,115
Number of Sequences: 438
Number of extensions: 3480
Number of successful extensions: 13
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19560480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)