Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021305
         (555 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061221-1|AAL28769.1|  201|Drosophila melanogaster LD16419p pro...   112   3e-25
AE014296-3251|AAF49090.1|  201|Drosophila melanogaster CG7823-PA...   112   3e-25
AY071713-1|AAL49335.1|  232|Drosophila melanogaster RH27559p pro...    28   9.7  
AE013599-1676|AAF58397.1|  232|Drosophila melanogaster CG4688-PA...    28   9.7  

>AY061221-1|AAL28769.1|  201|Drosophila melanogaster LD16419p
           protein.
          Length = 201

 Score =  112 bits (270), Expect = 3e-25
 Identities = 58/87 (66%), Positives = 68/87 (78%)
 Frame = +3

Query: 255 EILAADQEDESLRKYKEALLGQAQAGAVIVEPDDPRKVIVKKQHCVWVGRHDVELDLTGD 434
           EI+AADQEDESLR+YKEALLG AQ   +IVEP+DPRKVIVKK   V  GR D+ELDLTGD
Sbjct: 32  EIMAADQEDESLRRYKEALLGAAQTEKIIVEPNDPRKVIVKKLALVVEGRDDMELDLTGD 91

Query: 435 LTDLQKQGFVIKEGVHTE*RXVYVHAR 515
           L+ L+KQ FVIKEGV  + R  ++  R
Sbjct: 92  LSQLKKQLFVIKEGVQYKVRIDFIVQR 118


>AE014296-3251|AAF49090.1|  201|Drosophila melanogaster CG7823-PA
           protein.
          Length = 201

 Score =  112 bits (270), Expect = 3e-25
 Identities = 58/87 (66%), Positives = 68/87 (78%)
 Frame = +3

Query: 255 EILAADQEDESLRKYKEALLGQAQAGAVIVEPDDPRKVIVKKQHCVWVGRHDVELDLTGD 434
           EI+AADQEDESLR+YKEALLG AQ   +IVEP+DPRKVIVKK   V  GR D+ELDLTGD
Sbjct: 32  EIMAADQEDESLRRYKEALLGAAQTEKIIVEPNDPRKVIVKKLALVVEGRDDMELDLTGD 91

Query: 435 LTDLQKQGFVIKEGVHTE*RXVYVHAR 515
           L+ L+KQ FVIKEGV  + R  ++  R
Sbjct: 92  LSQLKKQLFVIKEGVQYKVRIDFIVQR 118


>AY071713-1|AAL49335.1|  232|Drosophila melanogaster RH27559p
           protein.
          Length = 232

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = +2

Query: 44  ETANRCKFYNYLVFKCFFLFR 106
           E A R K  N L+F+C FLFR
Sbjct: 91  EHAERMKVLNLLLFECSFLFR 111


>AE013599-1676|AAF58397.1|  232|Drosophila melanogaster CG4688-PA
           protein.
          Length = 232

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = +2

Query: 44  ETANRCKFYNYLVFKCFFLFR 106
           E A R K  N L+F+C FLFR
Sbjct: 91  EHAERMKVLNLLLFECSFLFR 111


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,412,647
Number of Sequences: 53049
Number of extensions: 458092
Number of successful extensions: 1133
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1101
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1133
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2131214097
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)