Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021303
         (669 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-3029|AAN09550.1| 1240|Drosophila melanogaster CG32506-P...    30   3.3  
BT011166-1|AAR82835.1|  741|Drosophila melanogaster AT02106p pro...    29   7.6  
AE014297-231|AAN13278.1|  687|Drosophila melanogaster CG16708-PB...    29   7.6  
AE014297-230|AAF52040.2|  687|Drosophila melanogaster CG16708-PA...    29   7.6  
AE014296-1539|AAF50353.2|  887|Drosophila melanogaster CG5741-PA...    29   7.6  

>AE014298-3029|AAN09550.1| 1240|Drosophila melanogaster CG32506-PA
            protein.
          Length = 1240

 Score = 29.9 bits (64), Expect = 3.3
 Identities = 23/88 (26%), Positives = 39/88 (44%), Gaps = 6/88 (6%)
 Frame = +1

Query: 418  PQNERASTDTHQIDDPIHVISMPDEETMQQSRQTTTLWAGAP---PTY---DDAIKLNPA 579
            P+  + STD+  +D+  + +  PDEE  +Q +Q     + +    P Y   ++ I   P+
Sbjct: 836  PRAMKTSTDSGHVDESFNELDEPDEEDNKQKQQQDEKISESESKLPDYRKLEEQINQEPS 895

Query: 580  ATVAGVEQRARRVGPQSDARRRTCDPRS 663
             + A        VGP    +R   D RS
Sbjct: 896  CS-ASTASSYETVGPGEVHQRPNSDTRS 922


>BT011166-1|AAR82835.1|  741|Drosophila melanogaster AT02106p
           protein.
          Length = 741

 Score = 28.7 bits (61), Expect = 7.6
 Identities = 14/29 (48%), Positives = 17/29 (58%)
 Frame = -2

Query: 632 SDCGPTLRARCSTPATVAAGFSLMASSYV 546
           +D G    +R S    VA GFS +ASSYV
Sbjct: 97  TDAGADADSRASLTLPVAPGFSTLASSYV 125


>AE014297-231|AAN13278.1|  687|Drosophila melanogaster CG16708-PB,
           isoform B protein.
          Length = 687

 Score = 28.7 bits (61), Expect = 7.6
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +2

Query: 572 IQRRLLPASNSARGESARSPMPGDAPVIPG 661
           +  RL     S +G  A++P+P D+P  PG
Sbjct: 62  VWERLQKIKQSPQGNEAKAPLPPDSPAQPG 91


>AE014297-230|AAF52040.2|  687|Drosophila melanogaster CG16708-PA,
           isoform A protein.
          Length = 687

 Score = 28.7 bits (61), Expect = 7.6
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +2

Query: 572 IQRRLLPASNSARGESARSPMPGDAPVIPG 661
           +  RL     S +G  A++P+P D+P  PG
Sbjct: 62  VWERLQKIKQSPQGNEAKAPLPPDSPAQPG 91


>AE014296-1539|AAF50353.2|  887|Drosophila melanogaster CG5741-PA
           protein.
          Length = 887

 Score = 28.7 bits (61), Expect = 7.6
 Identities = 14/29 (48%), Positives = 17/29 (58%)
 Frame = -2

Query: 632 SDCGPTLRARCSTPATVAAGFSLMASSYV 546
           +D G    +R S    VA GFS +ASSYV
Sbjct: 97  TDAGADADSRASLTLPVAPGFSTLASSYV 125


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,017,273
Number of Sequences: 53049
Number of extensions: 803430
Number of successful extensions: 2554
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2347
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2554
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2889369000
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)