Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021303
         (669 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82077-5|CAB63333.1|  783|Caenorhabditis elegans Hypothetical pr...    29   3.0  
AC024751-8|AAK21510.3|  369|Caenorhabditis elegans Hypothetical ...    29   3.0  
Z35719-6|CAA84795.1| 1253|Caenorhabditis elegans Hypothetical pr...    29   3.9  
AC025716-21|AAT39978.1|  586|Caenorhabditis elegans Hypothetical...    29   3.9  
AC025716-20|AAT39977.2|  946|Caenorhabditis elegans Hypothetical...    29   3.9  
Z74042-9|CAA98526.1|  325|Caenorhabditis elegans Hypothetical pr...    28   5.2  
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr...    28   5.2  
AF045644-1|AAC02601.1|  543|Caenorhabditis elegans Hypothetical ...    28   6.9  
AF025469-5|AAG00029.1| 2054|Caenorhabditis elegans Hypothetical ...    28   6.9  
Z81109-1|CAB03245.1|  485|Caenorhabditis elegans Hypothetical pr...    27   9.1  
U29097-4|AAM98031.1|  308|Caenorhabditis elegans Hypothetical pr...    27   9.1  
AL032637-21|CAA21618.2|  612|Caenorhabditis elegans Hypothetical...    27   9.1  
AF077538-2|AAC64623.2|  175|Caenorhabditis elegans Hypothetical ...    27   9.1  

>Z82077-5|CAB63333.1|  783|Caenorhabditis elegans Hypothetical
           protein W09C5.7 protein.
          Length = 783

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 17/65 (26%), Positives = 35/65 (53%)
 Frame = -1

Query: 252 YGLCDCLPSSNDMPVFLLLDKNNLHRSDFKYHGTRKKNTQNLSKLITKLQLGSSTTLRTV 73
           +GL +   SS+++   ++L ++NL+   ++  G +  + Q ++       L    T++T 
Sbjct: 562 WGLINAFQSSDEIDTVVILTRSNLYIVTYEIDGEKMTDVQIVA-------LEDINTIQTG 614

Query: 72  TSGNN 58
           TSGNN
Sbjct: 615 TSGNN 619


>AC024751-8|AAK21510.3|  369|Caenorhabditis elegans Hypothetical
           protein Y18H1A.7 protein.
          Length = 369

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
 Frame = +3

Query: 495 DDATKPPDYDTVGGST-ANV*RRHQTESSGDCCRRRTARAESRPAVR 632
           DD ++  D D + GS  A + R +  E+    CR+    A+S P VR
Sbjct: 54  DDDSEDDDGDVITGSQEAQLKRLNNEEAGSSSCRKSPETAKSTPKVR 100


>Z35719-6|CAA84795.1| 1253|Caenorhabditis elegans Hypothetical
           protein F17C8.1 protein.
          Length = 1253

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = -2

Query: 662 DLGSQVRLLASDCGPTLRARCSTPATV 582
           D+G +   L   CGP++RA  S+P  V
Sbjct: 4   DVGERTPALGGSCGPSVRAHSSSPRRV 30


>AC025716-21|AAT39978.1|  586|Caenorhabditis elegans Hypothetical
           protein Y39G10AR.18b protein.
          Length = 586

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 16/51 (31%), Positives = 22/51 (43%)
 Frame = -2

Query: 404 DCSQQHIAAQMSSAPATMHATPTYRTGSA*SSARPSQLISAPAHNNTMPYC 252
           + S       ++  PA +   PT     A + A P Q  +APA  N MP C
Sbjct: 256 EASPSAFGPPLAHLPAPVAIYPTPPPPPAPAPAAPQQASAAPAAPNVMPVC 306


>AC025716-20|AAT39977.2|  946|Caenorhabditis elegans Hypothetical
           protein Y39G10AR.18a protein.
          Length = 946

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 16/51 (31%), Positives = 22/51 (43%)
 Frame = -2

Query: 404 DCSQQHIAAQMSSAPATMHATPTYRTGSA*SSARPSQLISAPAHNNTMPYC 252
           + S       ++  PA +   PT     A + A P Q  +APA  N MP C
Sbjct: 616 EASPSAFGPPLAHLPAPVAIYPTPPPPPAPAPAAPQQASAAPAAPNVMPVC 666


>Z74042-9|CAA98526.1|  325|Caenorhabditis elegans Hypothetical
           protein T11F9.10 protein.
          Length = 325

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
 Frame = +2

Query: 410 LGSRKTNGLRLIHIRSTIPFT*YQCQTRR-RCNKAARLRHCGREHRQRM 553
           LG+ +     ++H+    P +   C + R RC    R+R CG + R+R+
Sbjct: 11  LGTFEPPPTTVLHLHIRPPTSCATCTSNRPRCTPPRRIRQCGPKFRRRL 59


>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
            K06A9.1b protein.
          Length = 2232

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 16/40 (40%), Positives = 19/40 (47%)
 Frame = -2

Query: 380  AQMSSAPATMHATPTYRTGSA*SSARPSQLISAPAHNNTM 261
            A  S  P+   +TPT  TGS  SS   S  IS    + TM
Sbjct: 1409 ASSSPVPSQTSSTPTNPTGSTESSTLLSSTISGSTQHTTM 1448


>AF045644-1|AAC02601.1|  543|Caenorhabditis elegans Hypothetical
           protein F57H12.5 protein.
          Length = 543

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 15/46 (32%), Positives = 25/46 (54%)
 Frame = -1

Query: 183 LHRSDFKYHGTRKKNTQNLSKLITKLQLGSSTTLRTVTSGNNLNTV 46
           + RSD K  G +KK+++  SK  TK+ LG  + L      N++  +
Sbjct: 178 MERSDEK--GVKKKHSKKHSKQKTKMWLGMPSALNFCNKNNDIQKI 221


>AF025469-5|AAG00029.1| 2054|Caenorhabditis elegans Hypothetical
           protein W09B6.1a protein.
          Length = 2054

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 12/28 (42%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
 Frame = +2

Query: 338 WAWRASSPEHYSSARRCVAGC-NLLLGS 418
           W+W +S     S    C+A C NLL GS
Sbjct: 775 WSWHSSKANEQSKFNDCLAQCQNLLAGS 802


>Z81109-1|CAB03245.1|  485|Caenorhabditis elegans Hypothetical
           protein R10D12.1 protein.
          Length = 485

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = +1

Query: 358 AGALLICAAMCCWLQSPARQPQNERASTDTHQIDDPIH 471
           A  LLIC A+ CWL +    P  +R    +   + P++
Sbjct: 444 AAILLICNAIFCWLATAKPAPWTDRTIKHSATKNTPLY 481


>U29097-4|AAM98031.1|  308|Caenorhabditis elegans Hypothetical
           protein F18C5.4 protein.
          Length = 308

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = -3

Query: 331 APVPRSLQPDPAS*LALPHITTP 263
           APVP +L  DPA  + +P+I +P
Sbjct: 274 APVPATLPSDPAPEVRIPYIPSP 296


>AL032637-21|CAA21618.2|  612|Caenorhabditis elegans Hypothetical
           protein Y43F8C.3 protein.
          Length = 612

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 12/37 (32%), Positives = 21/37 (56%)
 Frame = +1

Query: 424 NERASTDTHQIDDPIHVISMPDEETMQQSRQTTTLWA 534
           N   S   H++D P+ +++ P+EE ++    TT  WA
Sbjct: 224 NREFSQLMHRLD-PVEIVAEPNEEPVKFEFNTTLKWA 259


>AF077538-2|AAC64623.2|  175|Caenorhabditis elegans Hypothetical
           protein H02F09.2 protein.
          Length = 175

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 13/38 (34%), Positives = 22/38 (57%)
 Frame = -1

Query: 162 YHGTRKKNTQNLSKLITKLQLGSSTTLRTVTSGNNLNT 49
           Y GT  K T N  K +  + +G +T++  +T+G N+ T
Sbjct: 115 YDGTTIKPTYNNFKTVIGVLVGGATSIPGLTTGTNVVT 152


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,788,673
Number of Sequences: 27780
Number of extensions: 380566
Number of successful extensions: 1050
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 979
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1050
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1508017654
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)