Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021300
         (680 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    24   1.0  
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    23   3.1  
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    22   5.3  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    22   5.3  

>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 11/30 (36%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
 Frame = +3

Query: 21  ELTDLESAIGFCEEV--GYPCLVRPSYVLS 104
           E+TDLE A+ +C  +  GY  +   +Y L+
Sbjct: 44  EITDLEPALQYCTHLIYGYAAIDEETYKLT 73


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 11/36 (30%), Positives = 17/36 (47%)
 Frame = +3

Query: 87  PSYVLSGAAMNVANSHQELETYLKSASQLSKEHPVV 194
           P Y        +  ++Q    YL++AS L K  P+V
Sbjct: 208 PPYPFYPGTSAMLAAYQRYNPYLQAASMLPKPTPLV 243


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -3

Query: 342 ISCGGVTRVASPECT 298
           I+C G + +ASP CT
Sbjct: 98  IACIGFSWIASPACT 112


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = -1

Query: 437 FCYQLHIKWTSYV*SFSYDSR 375
           FC+ +  KW +Y+  F  + R
Sbjct: 398 FCHMVSHKWLNYINQFEANFR 418


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,861
Number of Sequences: 336
Number of extensions: 3790
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17801955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)