Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021299
(668 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1; Peri... 87 4e-16
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 87 5e-16
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 87 5e-16
UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106; ... 75 2e-12
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 74 4e-12
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 71 2e-11
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 71 3e-11
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 71 3e-11
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 71 3e-11
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 70 4e-11
UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4 pre... 70 4e-11
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 70 6e-11
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 69 8e-11
UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI... 69 8e-11
UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI... 69 8e-11
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 69 1e-10
UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein; ... 68 2e-10
UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1; Wa... 67 4e-10
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 67 4e-10
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 66 5e-10
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 65 2e-09
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 64 3e-09
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 64 4e-09
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 64 4e-09
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 62 2e-08
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 61 2e-08
UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|... 61 2e-08
UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|R... 61 2e-08
UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|R... 61 2e-08
UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Ae... 60 4e-08
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 59 8e-08
UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1; My... 59 8e-08
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 59 8e-08
UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa gro... 58 1e-07
UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI... 51 2e-05
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 50 4e-05
UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1; Ap... 50 4e-05
UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1; Cela... 50 7e-05
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 49 9e-05
UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia polym... 49 1e-04
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 48 3e-04
UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1; Mu... 48 3e-04
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 44 0.003
UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia lipolyti... 42 0.013
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 42 0.018
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 41 0.031
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 39 0.095
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 39 0.13
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 39 0.13
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 39 0.13
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 38 0.22
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 38 0.29
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 37 0.51
UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1; Kluyver... 37 0.51
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 36 1.2
UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1; Te... 35 1.5
UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1; Pach... 35 2.0
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 33 4.7
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 33 6.2
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 33 8.2
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 33 8.2
>UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1;
Periclimenes thermohydrophilus|Rep: Cytochrome oxidase
subunit I - Periclimenes thermohydrophilus
Length = 217
Score = 87.0 bits (206), Expect = 4e-16
Identities = 48/90 (53%), Positives = 55/90 (61%)
Frame = -2
Query: 292 KGGG*ESKSYIIYRGNAISGAPSIRGTNQFPNPPXXXXXXXXXXXXKACAVTIVL*I*SS 113
K GG + RGNA+SGAP++ GTNQFPNPP KA AVT+ L I S
Sbjct: 126 KEGGSNQNLMLFIRGNAMSGAPNMSGTNQFPNPPIMIGMTMKKIITKAWAVTMTL-IWSF 184
Query: 112 PINDPGFPNSARIKSLKDVPIIPDQIPKIK 23
PI PG PNSARIKSL DVP +P PK+K
Sbjct: 185 PIKLPGCPNSARIKSLSDVPTMPAHAPKMK 214
Score = 82.2 bits (194), Expect = 1e-14
Identities = 39/63 (61%), Positives = 46/63 (73%)
Frame = -3
Query: 435 DEIPAKCSEKIARSTDLPLCAILDESGG*TVHPVPAPFSTILLEINNIREGGRSQNLILF 256
+E PAKC+EKI STD P CAI SGG TVHPVP P STI L + ++EGG +QNL+LF
Sbjct: 78 EETPAKCNEKIPMSTDAPACAIPLASGGYTVHPVPTPLSTIPLNKSKVKEGGSNQNLMLF 137
Query: 255 IVG 247
I G
Sbjct: 138 IRG 140
Score = 57.2 bits (132), Expect = 3e-07
Identities = 28/52 (53%), Positives = 36/52 (69%)
Frame = -1
Query: 650 LGLPPSSRIKNDVFKFRSVNNIVIAPAKTGSDNNNKNAVIPTAHTNKVIDQM 495
+G PP + K +VFKFRSV +IVIAPA TGS++N+K AV T TN + M
Sbjct: 6 IGSPPPAGSKKEVFKFRSVKSIVIAPASTGSESNSKMAVSNTDQTNSGMRSM 57
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 86.6 bits (205), Expect = 5e-16
Identities = 47/88 (53%), Positives = 50/88 (56%)
Frame = +2
Query: 248 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 427
P +NN+ F IVENGAGTG TVYPPLSSNIAH G SVDLAIFSLHLAG
Sbjct: 92 PRMNNMSFWLLPPSLTLLISSSIVENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLAG 151
Query: 428 ISSXXXXXXXXXXXXXXXXXXXSFDQLP 511
ISS SFDQ+P
Sbjct: 152 ISSILGAINFITTIINMRMNNLSFDQMP 179
Score = 74.5 bits (175), Expect = 2e-12
Identities = 41/71 (57%), Positives = 43/71 (60%)
Frame = +3
Query: 81 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR*I 260
AELG PGSLIGDDQIYNTIVTAHA N LVPL+LGAPD+AFPR
Sbjct: 36 AELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVMPIMIGGFGNWLVPLMLGAPDMAFPRMN 95
Query: 261 I*DFDSYPPPL 293
F PP L
Sbjct: 96 NMSFWLLPPSL 106
Score = 54.4 bits (125), Expect = 2e-06
Identities = 30/49 (61%), Positives = 31/49 (63%)
Frame = +1
Query: 511 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFLILLEGGRPNFY 657
LFV AVGITAF AGAIT+LLTDRNLNTSF GG P Y
Sbjct: 180 LFVWAVGITAFLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILY 228
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 86.6 bits (205), Expect = 5e-16
Identities = 47/88 (53%), Positives = 50/88 (56%)
Frame = +2
Query: 248 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 427
P +NN+ F IVENGAGTG TVYPPLSSNIAH G SVDLAIFSLHLAG
Sbjct: 68 PRMNNMSFWLLPPSLILLISSSIVENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLAG 127
Query: 428 ISSXXXXXXXXXXXXXXXXXXXSFDQLP 511
ISS SFDQ+P
Sbjct: 128 ISSILGAINFITTIINMRINKMSFDQMP 155
Score = 72.5 bits (170), Expect = 8e-12
Identities = 39/70 (55%), Positives = 42/70 (60%)
Frame = +3
Query: 84 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR*II 263
ELG PGSLIGDDQIYNTIVTAHA N L+PL+LGAPD+AFPR
Sbjct: 13 ELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVMPIMIGGFGNWLIPLMLGAPDMAFPRMNN 72
Query: 264 *DFDSYPPPL 293
F PP L
Sbjct: 73 MSFWLLPPSL 82
Score = 51.6 bits (118), Expect = 2e-05
Identities = 28/49 (57%), Positives = 30/49 (61%)
Frame = +1
Query: 511 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFLILLEGGRPNFY 657
LF+ AVGITA AGAIT+LLTDRNLNTSF GG P Y
Sbjct: 156 LFIWAVGITALLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILY 204
>UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Homalopoma maculosa
Length = 219
Score = 74.5 bits (175), Expect = 2e-12
Identities = 37/63 (58%), Positives = 41/63 (65%)
Frame = +2
Query: 248 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 427
P +NN+ F VE+GAGTG TVYPPLS N AH G SVDLAIFSLHLAG
Sbjct: 78 PRLNNMSFWFLPPSLSLLLMSAAVESGAGTGWTVYPPLSGNTAHAGPSVDLAIFSLHLAG 137
Query: 428 ISS 436
+SS
Sbjct: 138 VSS 140
Score = 66.1 bits (154), Expect = 7e-10
Identities = 35/70 (50%), Positives = 40/70 (57%)
Frame = +3
Query: 84 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR*II 263
ELG PGS IG+DQ+YN +VTAHA N LVPL+LGAPD+AFPR
Sbjct: 23 ELGQPGSFIGNDQLYNVVVTAHAFVMIFFLVMPMMIGGFGNWLVPLMLGAPDMAFPRLNN 82
Query: 264 *DFDSYPPPL 293
F PP L
Sbjct: 83 MSFWFLPPSL 92
Score = 46.0 bits (104), Expect = 8e-04
Identities = 26/49 (53%), Positives = 28/49 (57%)
Frame = +1
Query: 511 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFLILLEGGRPNFY 657
LFV +V ITA AGAIT+LLTDRN NTSF GG P Y
Sbjct: 166 LFVWSVKITAILLLLSLPVLAGAITMLLTDRNFNTSFFDPAGGGDPILY 214
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 73.7 bits (173), Expect = 4e-12
Identities = 38/63 (60%), Positives = 42/63 (66%)
Frame = +2
Query: 248 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 427
P +NN+ F VE GAGTG TVYPPL+ N+AH G SVDLAIFSLHLAG
Sbjct: 96 PRMNNMSFWLXPPSFLLLLASSTVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAG 155
Query: 428 ISS 436
ISS
Sbjct: 156 ISS 158
Score = 68.9 bits (161), Expect = 1e-10
Identities = 33/58 (56%), Positives = 38/58 (65%)
Frame = +3
Query: 81 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 254
AELG PG+L+GDDQIYN IVTAHA N LVPL++GAPD+AFPR
Sbjct: 40 AELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPR 97
Score = 41.1 bits (92), Expect = 0.024
Identities = 24/49 (48%), Positives = 27/49 (55%)
Frame = +1
Query: 511 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFLILLEGGRPNFY 657
LFV +V ITA A IT+LLTDRNLNT+F GG P Y
Sbjct: 184 LFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILY 232
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 71.3 bits (167), Expect = 2e-11
Identities = 36/63 (57%), Positives = 41/63 (65%)
Frame = +2
Query: 248 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 427
P +NNI F +VE GAGTG TVYPPL+S AH G SVD+AIFSLHLAG
Sbjct: 96 PRLNNISFWLLPPALFLLLGSSLVEQGAGTGWTVYPPLASIQAHSGGSVDMAIFSLHLAG 155
Query: 428 ISS 436
+SS
Sbjct: 156 LSS 158
Score = 63.3 bits (147), Expect = 5e-09
Identities = 32/71 (45%), Positives = 40/71 (56%)
Frame = +3
Query: 84 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR*II 263
EL +PGS++GDD +YN IVTAHA N VPL++GAPD+AFPR
Sbjct: 41 ELSSPGSMLGDDHLYNVIVTAHAFVMIFFLVMPTMIGGFGNWFVPLMIGAPDMAFPRLNN 100
Query: 264 *DFDSYPPPLY 296
F PP L+
Sbjct: 101 ISFWLLPPALF 111
Score = 40.7 bits (91), Expect = 0.031
Identities = 24/49 (48%), Positives = 27/49 (55%)
Frame = +1
Query: 511 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFLILLEGGRPNFY 657
LFV +V ITA AGAIT+LLTDR NT+F GG P Y
Sbjct: 184 LFVWSVLITAILLLLSLPVLAGAITMLLTDRYFNTTFFDPAGGGDPILY 232
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 70.5 bits (165), Expect = 3e-11
Identities = 35/63 (55%), Positives = 40/63 (63%)
Frame = +2
Query: 248 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 427
P +NN+ F +E GAGTG TVYPPL+ N+AH G SVDL IFSLHLAG
Sbjct: 84 PRMNNMSFWLLPPSFLLLLASSGIEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAG 143
Query: 428 ISS 436
ISS
Sbjct: 144 ISS 146
Score = 66.1 bits (154), Expect = 7e-10
Identities = 31/58 (53%), Positives = 37/58 (63%)
Frame = +3
Query: 81 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 254
AEL PG+L+GDDQIYN IVTAHA N L+PL++GAPD+AFPR
Sbjct: 28 AELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLIPLMIGAPDMAFPR 85
Score = 37.5 bits (83), Expect = 0.29
Identities = 21/37 (56%), Positives = 23/37 (62%)
Frame = +1
Query: 511 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 621
LFV AV ITA A IT+LLTDRNLNT+F
Sbjct: 172 LFVWAVLITAVLLLLSLPVLAAGITMLLTDRNLNTTF 208
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 70.5 bits (165), Expect = 3e-11
Identities = 35/63 (55%), Positives = 40/63 (63%)
Frame = +2
Query: 248 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 427
P +NN+ F VE GAGTG TVYPPL+ N+AH G SVDL IFSLHLAG
Sbjct: 95 PRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAG 154
Query: 428 ISS 436
+SS
Sbjct: 155 VSS 157
Score = 66.5 bits (155), Expect = 5e-10
Identities = 32/58 (55%), Positives = 37/58 (63%)
Frame = +3
Query: 81 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 254
AEL PG+L+GDDQIYN IVTAHA N LVPL++GAPD+AFPR
Sbjct: 39 AELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPVMIGGFGNWLVPLMIGAPDMAFPR 96
Score = 40.7 bits (91), Expect = 0.031
Identities = 23/49 (46%), Positives = 27/49 (55%)
Frame = +1
Query: 511 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFLILLEGGRPNFY 657
LFV +V +TA A IT+LLTDRNLNT+F GG P Y
Sbjct: 183 LFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILY 231
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 70.5 bits (165), Expect = 3e-11
Identities = 35/63 (55%), Positives = 40/63 (63%)
Frame = +2
Query: 248 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 427
P +NN+ F VE GAGTG TVYPPL+ N+AH G SVDL IFSLHLAG
Sbjct: 95 PRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAG 154
Query: 428 ISS 436
+SS
Sbjct: 155 VSS 157
Score = 66.5 bits (155), Expect = 5e-10
Identities = 32/58 (55%), Positives = 37/58 (63%)
Frame = +3
Query: 81 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 254
AEL PG+L+GDDQIYN IVTAHA N LVPL++GAPD+AFPR
Sbjct: 39 AELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPILIGGFGNWLVPLMIGAPDMAFPR 96
Score = 41.9 bits (94), Expect = 0.013
Identities = 24/49 (48%), Positives = 27/49 (55%)
Frame = +1
Query: 511 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFLILLEGGRPNFY 657
LFV AV +TA A IT+LLTDRNLNT+F GG P Y
Sbjct: 183 LFVWAVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILY 231
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 70.1 bits (164), Expect = 4e-11
Identities = 37/63 (58%), Positives = 40/63 (63%)
Frame = +2
Query: 248 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 427
P INNI F +VE+GAGTG TVYPPLSS AH G SVDLAIF+LHL
Sbjct: 96 PRINNIAFWVLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFALHLTS 155
Query: 428 ISS 436
ISS
Sbjct: 156 ISS 158
Score = 41.5 bits (93), Expect = 0.018
Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = +3
Query: 84 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 254
EL PGS L G+ Q++N +V HA N L+PL++GA D AFPR
Sbjct: 39 ELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLVMPALIGGFGNYLLPLMIGATDTAFPR 97
Score = 41.1 bits (92), Expect = 0.024
Identities = 22/49 (44%), Positives = 27/49 (55%)
Frame = +1
Query: 511 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFLILLEGGRPNFY 657
LFV ++ ITAF + IT+LL DRN NTSF + GG P Y
Sbjct: 184 LFVWSIFITAFLLLLSLPVLSAGITMLLLDRNFNTSFFEVSGGGDPILY 232
>UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4
precursor (DNA endonuclease I- SceII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI4 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceII)]; n=4; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI4 precursor (DNA
endonuclease I- SceII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI4 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 556
Score = 70.1 bits (164), Expect = 4e-11
Identities = 37/63 (58%), Positives = 40/63 (63%)
Frame = +2
Query: 248 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 427
P INNI F +VE+GAGTG TVYPPLSS AH G SVDLAIF+LHL
Sbjct: 96 PRINNIAFWVLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFALHLTS 155
Query: 428 ISS 436
ISS
Sbjct: 156 ISS 158
Score = 41.5 bits (93), Expect = 0.018
Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = +3
Query: 84 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 254
EL PGS L G+ Q++N +V HA N L+PL++GA D AFPR
Sbjct: 39 ELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLVMPALIGGFGNYLLPLMIGATDTAFPR 97
Score = 41.1 bits (92), Expect = 0.024
Identities = 22/49 (44%), Positives = 27/49 (55%)
Frame = +1
Query: 511 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFLILLEGGRPNFY 657
LFV ++ ITAF + IT+LL DRN NTSF + GG P Y
Sbjct: 184 LFVWSIFITAFLLLLSLPVLSAGITMLLLDRNFNTSFFEVSGGGDPILY 232
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 69.7 bits (163), Expect = 6e-11
Identities = 34/63 (53%), Positives = 40/63 (63%)
Frame = +2
Query: 248 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 427
P +NN+ F +VE GAGTG TVYPPL+ N +H G SVDL IFSLHLAG
Sbjct: 95 PRMNNMSFWLLPPSLLLLLASAMVEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLHLAG 154
Query: 428 ISS 436
+SS
Sbjct: 155 VSS 157
Score = 65.7 bits (153), Expect = 1e-09
Identities = 35/71 (49%), Positives = 41/71 (57%)
Frame = +3
Query: 81 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR*I 260
AELG PG+L+G+D IYN IVTAHA N LVPL++GAPD+AFPR
Sbjct: 39 AELGQPGNLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMN 98
Query: 261 I*DFDSYPPPL 293
F PP L
Sbjct: 99 NMSFWLLPPSL 109
Score = 41.1 bits (92), Expect = 0.024
Identities = 24/49 (48%), Positives = 27/49 (55%)
Frame = +1
Query: 511 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFLILLEGGRPNFY 657
LFV +V ITA A IT+LLTDRNLNT+F GG P Y
Sbjct: 183 LFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILY 231
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 69.3 bits (162), Expect = 8e-11
Identities = 36/63 (57%), Positives = 39/63 (61%)
Frame = +2
Query: 248 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 427
P +NNI F VE GAGTG TVYPPLS +H G SVDLAIFSLHL+G
Sbjct: 95 PRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSG 154
Query: 428 ISS 436
ISS
Sbjct: 155 ISS 157
Score = 51.2 bits (117), Expect = 2e-05
Identities = 31/72 (43%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Frame = +3
Query: 84 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR* 257
EL PG L GD Q+YN I+TAHA N LVP+++GAPD+AFPR
Sbjct: 38 ELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPAMVGGFGNYLVPVMIGAPDMAFPRL 97
Query: 258 II*DFDSYPPPL 293
F PP L
Sbjct: 98 NNISFWLLPPSL 109
Score = 45.6 bits (103), Expect = 0.001
Identities = 25/49 (51%), Positives = 28/49 (57%)
Frame = +1
Query: 511 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFLILLEGGRPNFY 657
LFV A+ +TA AGAIT+LLTDRN NTSF GG P Y
Sbjct: 183 LFVWAIFVTAILLLLSLPVLAGAITMLLTDRNFNTSFYDPAGGGDPILY 231
>UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI5
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI5 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI5 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI5 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 536
Score = 69.3 bits (162), Expect = 8e-11
Identities = 36/63 (57%), Positives = 39/63 (61%)
Frame = +2
Query: 248 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 427
P +NNI F VE GAGTG TVYPPLS +H G SVDLAIFSLHL+G
Sbjct: 95 PRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSG 154
Query: 428 ISS 436
ISS
Sbjct: 155 ISS 157
Score = 51.2 bits (117), Expect = 2e-05
Identities = 31/72 (43%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Frame = +3
Query: 84 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR* 257
EL PG L GD Q+YN I+TAHA N LVP+++GAPD+AFPR
Sbjct: 38 ELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPAMVGGFGNYLVPVMIGAPDMAFPRL 97
Query: 258 II*DFDSYPPPL 293
F PP L
Sbjct: 98 NNISFWLLPPSL 109
Score = 45.6 bits (103), Expect = 0.001
Identities = 25/49 (51%), Positives = 28/49 (57%)
Frame = +1
Query: 511 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFLILLEGGRPNFY 657
LFV A+ +TA AGAIT+LLTDRN NTSF GG P Y
Sbjct: 183 LFVWAIFVTAILLLLSLPVLAGAITMLLTDRNFNTSFYDPAGGGDPILY 231
>UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI4
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI4 (EC
3.1.-.-)]; n=3; Basidiomycota|Rep: Probable
intron-encoded endonuclease aI4 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI4 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 530
Score = 69.3 bits (162), Expect = 8e-11
Identities = 36/63 (57%), Positives = 39/63 (61%)
Frame = +2
Query: 248 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 427
P +NNI F VE GAGTG TVYPPLS +H G SVDLAIFSLHL+G
Sbjct: 95 PRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSG 154
Query: 428 ISS 436
ISS
Sbjct: 155 ISS 157
Score = 51.2 bits (117), Expect = 2e-05
Identities = 31/72 (43%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Frame = +3
Query: 84 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR* 257
EL PG L GD Q+YN I+TAHA N LVP+++GAPD+AFPR
Sbjct: 38 ELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPAMVGGFGNYLVPVMIGAPDMAFPRL 97
Query: 258 II*DFDSYPPPL 293
F PP L
Sbjct: 98 NNISFWLLPPSL 109
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 68.9 bits (161), Expect = 1e-10
Identities = 37/63 (58%), Positives = 40/63 (63%)
Frame = +2
Query: 248 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 427
P IN+I F +VE+GAGTG TVYPPLSS AH G SVDLAIFSLHL
Sbjct: 96 PRINSIGFWLLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFSLHLTS 155
Query: 428 ISS 436
ISS
Sbjct: 156 ISS 158
Score = 45.2 bits (102), Expect = 0.001
Identities = 24/49 (48%), Positives = 28/49 (57%)
Frame = +1
Query: 511 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFLILLEGGRPNFY 657
LFV A+ ITAF + IT+LL DRN NTSF + GG P FY
Sbjct: 184 LFVWAIFITAFLLLLSLPVLSAGITMLLMDRNFNTSFFEVAGGGDPIFY 232
Score = 40.3 bits (90), Expect = 0.041
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = +3
Query: 84 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 254
EL PGS L G+ Q++N +V HA N ++PL++GA D++FPR
Sbjct: 39 ELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLAMPALIGGFGNYMLPLMIGATDMSFPR 97
>UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein;
n=1; Saccharomyces castellii|Rep: I-SceII DNA
endonuclease-like protein - Saccharomyces castellii
(Yeast)
Length = 598
Score = 67.7 bits (158), Expect = 2e-10
Identities = 35/63 (55%), Positives = 40/63 (63%)
Frame = +2
Query: 248 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 427
P INNI F +VE+GAGTG TVYPPL+S AH G SVDLAIF+LH+
Sbjct: 96 PRINNIGFWLLPMGLVCLVTSTLVESGAGTGWTVYPPLASIQAHSGPSVDLAIFALHMTS 155
Query: 428 ISS 436
ISS
Sbjct: 156 ISS 158
Score = 39.5 bits (88), Expect = 0.072
Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = +3
Query: 84 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 254
EL PG L G++Q++N +V HA N ++PL++GA D AFPR
Sbjct: 39 ELAAPGQQYLHGNNQLFNVLVVGHAILMIFFMVMPALIGGFGNYMLPLMIGATDTAFPR 97
Score = 39.1 bits (87), Expect = 0.095
Identities = 21/49 (42%), Positives = 26/49 (53%)
Frame = +1
Query: 511 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFLILLEGGRPNFY 657
LFV A+ ITA + +T+LL DRN NTSF + GG P Y
Sbjct: 184 LFVWAILITAVLLLLTLPVLSAGVTMLLLDRNFNTSFFEVAGGGDPILY 232
>UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1;
Watasenia scintillans|Rep: Cytochrome c oxidase subunit
I - Watasenia scintillans (Sparkling enope)
Length = 217
Score = 66.9 bits (156), Expect = 4e-10
Identities = 56/191 (29%), Positives = 75/191 (39%)
Frame = +3
Query: 84 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR*II 263
ELG PGSL+ DDQ+YN +VTAH N LVPL+LGAPD+AFPR
Sbjct: 24 ELGQPGSLLNDDQLYNVVVTAHGFIMIFFMVMPIMIGGFGNWLVPLMLGAPDMAFPRMNN 83
Query: 264 *DFDSYPPPLYY*FQEEL*KMVQEQDEQFTPHFHLISHIEEDP*ILLFFHYI*QVFHQL* 443
F +P +Y + K +DE TP + + + +F ++ V L
Sbjct: 84 MSFGFFPLHWHY-YSFFTVKGGLARDELSTPLYLVTISAGPSVDLAIFPLHLAGVSSILG 142
Query: 444 EXXXXXXXXXXXXXXXXXXXXXXXCMSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF 623
C+ Y TC S SYY IIN L + I
Sbjct: 143 SYWLYYNNSLYTVSSSSNGTTTFICLISVYYRYPSTPFFTCTSSSYYYIINSPLLLHYII 202
Query: 624 DPAGRRETQFL 656
P + F+
Sbjct: 203 WPWSSSGSYFM 213
Score = 33.1 bits (72), Expect = 6.2
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 383 GRSVDLAIFSLHLAGISS 436
G SVDLAIF LHLAG+SS
Sbjct: 122 GPSVDLAIFPLHLAGVSS 139
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 66.9 bits (156), Expect = 4e-10
Identities = 33/63 (52%), Positives = 40/63 (63%)
Frame = +2
Query: 248 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 427
P +NNI F +VE G+GTG TVYPPLS +H G +VDLAIFSLHL+G
Sbjct: 98 PRLNNISFWLLPPSLLLLLSSALVEVGSGTGWTVYPPLSGITSHSGGAVDLAIFSLHLSG 157
Query: 428 ISS 436
+SS
Sbjct: 158 VSS 160
Score = 49.6 bits (113), Expect = 7e-05
Identities = 28/72 (38%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Frame = +3
Query: 84 ELGNPGSLI--GDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR* 257
EL PG I G+ Q+YN ++TAHA N VP+++GAPD+AFPR
Sbjct: 41 ELARPGDQILGGNHQLYNVLITAHAFLMIFFMVMPAMIGGFGNWFVPILIGAPDMAFPRL 100
Query: 258 II*DFDSYPPPL 293
F PP L
Sbjct: 101 NNISFWLLPPSL 112
Score = 46.0 bits (104), Expect = 8e-04
Identities = 25/49 (51%), Positives = 29/49 (59%)
Frame = +1
Query: 511 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFLILLEGGRPNFY 657
LFV +V +TAF AGAIT+LLTDRN NT+F GG P Y
Sbjct: 186 LFVWSVLVTAFLLLLSLPVLAGAITMLLTDRNFNTTFFDPAGGGDPILY 234
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 66.5 bits (155), Expect = 5e-10
Identities = 31/40 (77%), Positives = 34/40 (85%)
Frame = +2
Query: 317 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 436
VE GAGTG TV PPLS+NIAH G SVDLAIFSLH+AG+ S
Sbjct: 37 VEKGAGTGWTVSPPLSANIAHEGSSVDLAIFSLHMAGVXS 76
Score = 48.0 bits (109), Expect = 2e-04
Identities = 27/49 (55%), Positives = 29/49 (59%)
Frame = +1
Query: 511 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFLILLEGGRPNFY 657
LFV AV ITA AGAIT+LLTDRN+NTSF GG P Y
Sbjct: 102 LFVWAVEITAILLLLSLPVLAGAITMLLTDRNINTSFFDPAGGGDPILY 150
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 64.9 bits (151), Expect = 2e-09
Identities = 33/63 (52%), Positives = 39/63 (61%)
Frame = +2
Query: 248 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 427
P +NNI F +VE G GTG TVYPPLSS +H G +VDLAIFSLH++G
Sbjct: 103 PRLNNISFWLLPPSLCLLLMSALVEVGVGTGWTVYPPLSSIQSHSGGAVDLAIFSLHISG 162
Query: 428 ISS 436
SS
Sbjct: 163 ASS 165
Score = 50.0 bits (114), Expect = 5e-05
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Frame = +3
Query: 84 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR* 257
EL P + L+G+ QIYN ++TAHA N LVP+++G+PD+AFPR
Sbjct: 46 ELAQPSNHLLLGNHQIYNVLITAHAFLMIFFMVMPVMIGGFGNWLVPIMIGSPDMAFPRL 105
Query: 258 II*DFDSYPPPL 293
F PP L
Sbjct: 106 NNISFWLLPPSL 117
Score = 47.2 bits (107), Expect = 4e-04
Identities = 25/49 (51%), Positives = 29/49 (59%)
Frame = +1
Query: 511 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFLILLEGGRPNFY 657
LFV ++ +TAF AGAIT+LLTDRN NTSF GG P Y
Sbjct: 191 LFVWSILVTAFLLLLAVPVLAGAITMLLTDRNFNTSFFDASGGGDPILY 239
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 64.1 bits (149), Expect = 3e-09
Identities = 32/63 (50%), Positives = 38/63 (60%)
Frame = +2
Query: 248 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 427
P +NNI + +ENG GTG T+YPPLS +H G SVDLAIF LHL+G
Sbjct: 96 PRLNNISYLLLIPSIVLFLFAGGIENGVGTGWTLYPPLSGIQSHSGPSVDLAIFGLHLSG 155
Query: 428 ISS 436
ISS
Sbjct: 156 ISS 158
Score = 48.0 bits (109), Expect = 2e-04
Identities = 25/58 (43%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +3
Query: 84 ELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 254
EL PG I D+Q+YN+I+TAHA N L+PL LG PD+ FPR
Sbjct: 40 ELSGPGVQYIADNQLYNSIITAHAIIMIFFMVMPALIGGFGNFLLPLGLGGPDMGFPR 97
Score = 43.6 bits (98), Expect = 0.004
Identities = 24/49 (48%), Positives = 27/49 (55%)
Frame = +1
Query: 511 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFLILLEGGRPNFY 657
LF AV ITA AG IT++LTDRN NTSF + GG P Y
Sbjct: 184 LFAWAVVITAVLLLLSLPVLAGGITMVLTDRNFNTSFFEVAGGGDPILY 232
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 63.7 bits (148), Expect = 4e-09
Identities = 33/58 (56%), Positives = 38/58 (65%)
Frame = +3
Query: 81 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 254
AELG PG+L+GDDQ N IVTAHA N LVPL++GAPD+AFPR
Sbjct: 40 AELGQPGTLLGDDQXXNVIVTAHAFVMIFXMXMPIMIGGFGNWLVPLMIGAPDMAFPR 97
Score = 34.3 bits (75), Expect = 2.7
Identities = 17/39 (43%), Positives = 20/39 (51%)
Frame = +2
Query: 248 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLS 364
P +NN+ F VE GAGTG TVYPPL+
Sbjct: 96 PRMNNMSFWLLPPSFLLLLASSTVEAGAGTGWTVYPPLA 134
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 63.7 bits (148), Expect = 4e-09
Identities = 30/57 (52%), Positives = 38/57 (66%)
Frame = +3
Query: 84 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 254
ELG PGSLIG+DQIYN+IVT+HA N L+PL+LG+PD++FPR
Sbjct: 24 ELGMPGSLIGNDQIYNSIVTSHAFIMIFFMVMPVMIGGFGNWLIPLMLGSPDMSFPR 80
Score = 60.9 bits (141), Expect = 3e-08
Identities = 31/63 (49%), Positives = 35/63 (55%)
Frame = +2
Query: 248 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 427
P +NN+ F + G GTG TVYPPLS + H G SVDL IFSLHLAG
Sbjct: 79 PRMNNMSFWLLIPSLLLLILSMFINVGVGTGWTVYPPLSLILGHGGMSVDLGIFSLHLAG 138
Query: 428 ISS 436
SS
Sbjct: 139 ASS 141
Score = 43.6 bits (98), Expect = 0.004
Identities = 25/49 (51%), Positives = 28/49 (57%)
Frame = +1
Query: 511 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFLILLEGGRPNFY 657
LF +V ITA AGAIT+LLTDRN+NTSF GG P Y
Sbjct: 167 LFSWSVFITAILLLLSLPVLAGAITMLLTDRNMNTSFFDPSGGGDPILY 215
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 61.7 bits (143), Expect = 2e-08
Identities = 29/63 (46%), Positives = 36/63 (57%)
Frame = +2
Query: 248 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 427
P +NN+ + I+ENG GTG T+YPPLS +H VDL IF LHL+G
Sbjct: 122 PRLNNVSYWLLIPSLFLFVFAAIIENGVGTGWTLYPPLSGIQSHSSMGVDLGIFGLHLSG 181
Query: 428 ISS 436
ISS
Sbjct: 182 ISS 184
Score = 46.8 bits (106), Expect = 5e-04
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = +3
Query: 84 ELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 254
EL PG I D+Q+YN+I+T+H N L+P+++G PD+AFPR
Sbjct: 66 ELSGPGIQYIEDNQLYNSIITSHGVIMIFFMVMPALIGGFGNFLLPILIGGPDMAFPR 123
Score = 41.9 bits (94), Expect = 0.013
Identities = 26/49 (53%), Positives = 27/49 (55%)
Frame = +1
Query: 511 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFLILLEGGRPNFY 657
LF AV ITA A AIT+LLTDRNLNTSF L GG Y
Sbjct: 210 LFGWAVVITAVLLLLSLPVLAAAITMLLTDRNLNTSFYELAGGGDAILY 258
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 61.3 bits (142), Expect = 2e-08
Identities = 27/63 (42%), Positives = 40/63 (63%)
Frame = +2
Query: 248 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 427
P INN+ F +++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G
Sbjct: 113 PRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSG 172
Query: 428 ISS 436
+SS
Sbjct: 173 LSS 175
Score = 41.9 bits (94), Expect = 0.013
Identities = 23/52 (44%), Positives = 29/52 (55%)
Frame = +1
Query: 511 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFLILLEGGRPNFYINI 666
LFV +V ITA A +T+LL DRN NTSF ++ GG P Y +I
Sbjct: 201 LFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHI 252
Score = 39.5 bits (88), Expect = 0.072
Identities = 20/54 (37%), Positives = 28/54 (51%)
Frame = +3
Query: 93 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 254
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPR
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPR 114
>UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida
stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast)
Length = 676
Score = 61.3 bits (142), Expect = 2e-08
Identities = 27/63 (42%), Positives = 40/63 (63%)
Frame = +2
Query: 248 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 427
P INN+ F +++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G
Sbjct: 113 PRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSG 172
Query: 428 ISS 436
+SS
Sbjct: 173 LSS 175
Score = 41.9 bits (94), Expect = 0.013
Identities = 23/52 (44%), Positives = 29/52 (55%)
Frame = +1
Query: 511 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFLILLEGGRPNFYINI 666
LFV +V ITA A +T+LL DRN NTSF ++ GG P Y +I
Sbjct: 201 LFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHI 252
Score = 39.5 bits (88), Expect = 0.072
Identities = 20/54 (37%), Positives = 28/54 (51%)
Frame = +3
Query: 93 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 254
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPR
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPR 114
>UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|Rep:
Cox-i3 protein - Candida stellata (Yeast)
Length = 588
Score = 61.3 bits (142), Expect = 2e-08
Identities = 27/63 (42%), Positives = 40/63 (63%)
Frame = +2
Query: 248 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 427
P INN+ F +++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G
Sbjct: 113 PRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSG 172
Query: 428 ISS 436
+SS
Sbjct: 173 LSS 175
Score = 41.9 bits (94), Expect = 0.013
Identities = 23/52 (44%), Positives = 29/52 (55%)
Frame = +1
Query: 511 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFLILLEGGRPNFYINI 666
LFV +V ITA A +T+LL DRN NTSF ++ GG P Y +I
Sbjct: 201 LFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHI 252
Score = 39.5 bits (88), Expect = 0.072
Identities = 20/54 (37%), Positives = 28/54 (51%)
Frame = +3
Query: 93 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 254
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPR
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPR 114
>UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|Rep:
Cox-i2 protein - Candida stellata (Yeast)
Length = 586
Score = 61.3 bits (142), Expect = 2e-08
Identities = 27/63 (42%), Positives = 40/63 (63%)
Frame = +2
Query: 248 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 427
P INN+ F +++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G
Sbjct: 113 PRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSG 172
Query: 428 ISS 436
+SS
Sbjct: 173 LSS 175
Score = 41.9 bits (94), Expect = 0.013
Identities = 23/52 (44%), Positives = 29/52 (55%)
Frame = +1
Query: 511 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFLILLEGGRPNFYINI 666
LFV +V ITA A +T+LL DRN NTSF ++ GG P Y +I
Sbjct: 201 LFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHI 252
Score = 39.5 bits (88), Expect = 0.072
Identities = 20/54 (37%), Positives = 28/54 (51%)
Frame = +3
Query: 93 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 254
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPR
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPR 114
>UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Aedes
cretinus|Rep: Cytochrome c oxidase subunit I - Aedes
cretinus
Length = 153
Score = 60.5 bits (140), Expect = 4e-08
Identities = 30/55 (54%), Positives = 34/55 (61%)
Frame = +2
Query: 248 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFS 412
P +NN+ F +VENGAGTG TVYPPLSS AH G SVDLAI+S
Sbjct: 11 PRMNNMSFWMLPPSLTLLLSSSMVENGAGTGWTVYPPLSSGTAHAGASVDLAIYS 65
Score = 39.1 bits (87), Expect = 0.095
Identities = 19/38 (50%), Positives = 21/38 (55%)
Frame = +3
Query: 516 CMSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIFDP 629
CM C +Y TCFS S+Y IIN K KY IF P
Sbjct: 97 CMICCNYCYFITSFFTCFSSSHYYIINWPKSKYFIFWP 134
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 59.3 bits (137), Expect = 8e-08
Identities = 31/63 (49%), Positives = 33/63 (52%)
Frame = +2
Query: 248 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 427
P +NN F E G GTG TVYPPLSS +H G SVDL IFS HL G
Sbjct: 99 PRLNNFSFWLLPGAILLAVLATYSEGGPGTGWTVYPPLSSLQSHSGASVDLMIFSFHLVG 158
Query: 428 ISS 436
I S
Sbjct: 159 IGS 161
Score = 39.9 bits (89), Expect = 0.054
Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Frame = +3
Query: 84 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 254
EL PG L G+ YN I T H N VP+++GAPD++FPR
Sbjct: 42 ELAFPGDQILFGEYHFYNMITTVHGVLMLFVVVMPILFGGFGNYFVPILIGAPDMSFPR 100
Score = 39.5 bits (88), Expect = 0.072
Identities = 21/44 (47%), Positives = 26/44 (59%)
Frame = +1
Query: 511 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFLILLEGG 642
LFV +V +T+F A AIT+LL DRN NTSF + GG
Sbjct: 187 LFVWSVAVTSFLVIVAIPVLAAAITLLLFDRNFNTSFYDPVGGG 230
>UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1;
Myrmarachne sp. G FSC-2006|Rep: Cytochrome c oxidase
subunit I - Myrmarachne sp. G FSC-2006
Length = 129
Score = 59.3 bits (137), Expect = 8e-08
Identities = 28/41 (68%), Positives = 31/41 (75%)
Frame = +2
Query: 314 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 436
+VE G G G TVYPPL+S + H G SVD AIFSLHLAG SS
Sbjct: 12 MVEMGVGAGWTVYPPLASVVGHGGSSVDFAIFSLHLAGASS 52
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 59.3 bits (137), Expect = 8e-08
Identities = 32/67 (47%), Positives = 39/67 (58%), Gaps = 4/67 (5%)
Frame = +2
Query: 248 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV----YPPLSSNIAHRGRSVDLAIFSL 415
P +NNI F I+E G GTG T+ YPPLS +H G SVDLAIF+L
Sbjct: 124 PRLNNISFWLLPPSLLLLVFSAIIEGGVGTGWTLLKDKYPPLSGLQSHSGPSVDLAIFAL 183
Query: 416 HLAGISS 436
HL+G+SS
Sbjct: 184 HLSGVSS 190
Score = 50.0 bits (114), Expect = 5e-05
Identities = 28/71 (39%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Frame = +3
Query: 84 ELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR*I 260
EL PG I ++Q+YN+I+TAHA N L+PL++G PD+AFPR
Sbjct: 68 ELSGPGVQFIANNQLYNSIITAHAILMIFFMVMPALIGGFGNFLMPLMIGGPDMAFPRLN 127
Query: 261 I*DFDSYPPPL 293
F PP L
Sbjct: 128 NISFWLLPPSL 138
>UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa
group|Rep: COX1-i5 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 608
Score = 58.4 bits (135), Expect = 1e-07
Identities = 31/61 (50%), Positives = 37/61 (60%)
Frame = +2
Query: 254 INNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGIS 433
+NNI F +VE GAGTG TVY PL+ +H G +VDLAIFSLHL+G S
Sbjct: 103 LNNISFWLLVPSLILILTSALVEAGAGTGWTVYFPLAGIQSHSGPAVDLAIFSLHLSGFS 162
Query: 434 S 436
S
Sbjct: 163 S 163
Score = 41.9 bits (94), Expect = 0.013
Identities = 24/59 (40%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = +3
Query: 84 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 254
EL N GS L G+ Q +N ++TAHA N L+PL+LGA D+AF R
Sbjct: 44 ELANTGSPFLHGNTQAFNVVITAHAILMIFFFVMPALVGGFGNYLMPLMLGASDMAFAR 102
>UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI2
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI2 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI2 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI2 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 533
Score = 51.2 bits (117), Expect = 2e-05
Identities = 31/72 (43%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Frame = +3
Query: 84 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR* 257
EL PG L GD Q+YN I+TAHA N LVP+++GAPD+AFPR
Sbjct: 38 ELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPAMVGGFGNYLVPVMIGAPDMAFPRL 97
Query: 258 II*DFDSYPPPL 293
F PP L
Sbjct: 98 NNISFWLLPPSL 109
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 50.4 bits (115), Expect = 4e-05
Identities = 22/63 (34%), Positives = 35/63 (55%)
Frame = +2
Query: 248 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 427
P +NN+ + +++ GAG G T YPP+S+ R+VD AIF++H++G
Sbjct: 201 PRLNNLSYWMYVAGTCLAFCSVMIDGGAGPGWTFYPPISAQGVETSRAVDFAIFAVHVSG 260
Query: 428 ISS 436
SS
Sbjct: 261 ASS 263
Score = 39.5 bits (88), Expect = 0.072
Identities = 22/52 (42%), Positives = 29/52 (55%)
Frame = +1
Query: 511 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFLILLEGGRPNFYINI 666
LF +V +TA+ AGAIT+LLTDRN T+F GG P + +I
Sbjct: 289 LFAWSVFVTAWLLLLSLPVLAGAITMLLTDRNFGTTFFDPAGGGDPILFQHI 340
Score = 36.7 bits (81), Expect = 0.51
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Frame = +3
Query: 81 AELGNPGSLIG--DDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 254
A LG L G D ++N ++T H N +PL++GAPD+AFPR
Sbjct: 143 ALLGTMDQLDGNPDGHLWNVLITGHGVLMMFFVVIPALFGGFGNYFMPLMIGAPDMAFPR 202
>UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1;
Aplidium nordmanni|Rep: Cytochrome c oxidase subunit I -
Aplidium nordmanni
Length = 227
Score = 50.4 bits (115), Expect = 4e-05
Identities = 28/63 (44%), Positives = 33/63 (52%)
Frame = +2
Query: 248 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 427
P + N+ F + G G VYPP SS +AH +VDL IF LHLAG
Sbjct: 85 PRLXNMSFWLLPPSLXXLCLSVFIGXGVGXXWXVYPPXSSGLAHSSGAVDLGIFXLHLAG 144
Query: 428 ISS 436
ISS
Sbjct: 145 ISS 147
>UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1;
Celatoblatta vulgaris|Rep: Cytochrome oxidase subunit I
- Celatoblatta vulgaris
Length = 134
Score = 49.6 bits (113), Expect = 7e-05
Identities = 22/46 (47%), Positives = 28/46 (60%)
Frame = +3
Query: 519 MSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIFDPAGRRETQFL 656
M C +YS +TC WSYYN IN SKLKYI+F P+ + F+
Sbjct: 84 MICSNYSFTIIIVSTCSCWSYYNTINWSKLKYILFWPSSSWGSYFM 129
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 49.2 bits (112), Expect = 9e-05
Identities = 24/63 (38%), Positives = 34/63 (53%)
Frame = +2
Query: 248 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 427
P +NN+ + G G G T+YPPLS++ G +DLA+FSLH+AG
Sbjct: 97 PRLNNLSVWLALGSLFLMCMAFLSSGGLGCGWTMYPPLSNSEFMDGLPIDLAVFSLHMAG 156
Query: 428 ISS 436
+SS
Sbjct: 157 MSS 159
>UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia
polymorpha|Rep: CoxI intron4 ORF - Marchantia polymorpha
(Liverwort)
Length = 434
Score = 48.8 bits (111), Expect = 1e-04
Identities = 27/72 (37%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Frame = +3
Query: 84 ELGNPGSLI--GDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR* 257
EL PG+ I G+ Q+YN ++TAHA N VP+++G+PD+AFPR
Sbjct: 42 ELAQPGNQILGGNHQLYNVLITAHAFLMIFFMVMPAMIGGFGNWFVPILIGSPDMAFPRL 101
Query: 258 II*DFDSYPPPL 293
F PP L
Sbjct: 102 NNISFWLLPPSL 113
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 47.6 bits (108), Expect = 3e-04
Identities = 24/38 (63%), Positives = 29/38 (76%)
Frame = +2
Query: 323 NGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 436
NGAGTG TVY PLS++ G +VD+AI SLH+AG SS
Sbjct: 164 NGAGTGWTVYAPLSTS-GSAGPAVDMAILSLHIAGASS 200
Score = 42.7 bits (96), Expect = 0.008
Identities = 23/49 (46%), Positives = 27/49 (55%)
Frame = +1
Query: 511 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFLILLEGGRPNFY 657
LFV +V +TAF A AIT+LLTDRN T+F GG P Y
Sbjct: 226 LFVWSVLVTAFLLLLALPVLAAAITMLLTDRNFGTTFYDAAGGGDPELY 274
Score = 35.9 bits (79), Expect = 0.88
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +3
Query: 123 IYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 254
++N ++TAH N VP+++GAPD+AFPR
Sbjct: 93 LWNVLITAHGLIMVFFMVMPAMIGGFGNWFVPIMIGAPDMAFPR 136
>UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1;
Munidopsis verrucosus|Rep: Cytochrome c oxidase subunit
1 - Munidopsis verrucosus
Length = 154
Score = 47.6 bits (108), Expect = 3e-04
Identities = 21/27 (77%), Positives = 25/27 (92%)
Frame = +2
Query: 356 PLSSNIAHRGRSVDLAIFSLHLAGISS 436
PL+S+IAH G SVD+AIFSLHLAG+SS
Sbjct: 72 PLASSIAHAGASVDMAIFSLHLAGVSS 98
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 44.0 bits (99), Expect = 0.003
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = +3
Query: 84 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 254
EL +PG G Q+YN+++T H N ++PL+LGAP++AFPR
Sbjct: 49 ELSSPGGHLFFGSGQVYNSVLTMHGVLMIFFLVMPILIGGFGNWMLPLMLGAPEMAFPR 107
Score = 37.1 bits (82), Expect = 0.38
Identities = 19/49 (38%), Positives = 25/49 (51%)
Frame = +1
Query: 511 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFLILLEGGRPNFY 657
+FV +T+F AG++ LL DRN NTSF +GG P Y
Sbjct: 193 MFVWTSYLTSFLLVLSVPVLAGSLLFLLLDRNFNTSFYDTKKGGNPLLY 241
>UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia
lipolytica|Rep: COX1-i3 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 457
Score = 41.9 bits (94), Expect = 0.013
Identities = 24/59 (40%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = +3
Query: 84 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 254
EL N GS L G+ Q +N ++TAHA N L+PL+LGA D+AF R
Sbjct: 44 ELANTGSPFLHGNTQAFNVVITAHAILMIFFFVMPALVGGFGNYLMPLMLGASDMAFAR 102
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 41.5 bits (93), Expect = 0.018
Identities = 21/63 (33%), Positives = 29/63 (46%)
Frame = +2
Query: 248 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 427
P +NN+ F + E G G G T+YP L H + D +F++HL G
Sbjct: 98 PRLNNMSFWMYLAGFGCVVNGFLTEEGMGVGWTLYPTLICIDFHSSLACDFVMFAVHLLG 157
Query: 428 ISS 436
ISS
Sbjct: 158 ISS 160
Score = 38.7 bits (86), Expect = 0.13
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = +3
Query: 99 GSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 254
G L GD Q YN ++T+H N +P++ G PD+ FPR
Sbjct: 48 GILFGDYQFYNVLITSHGLIMVFAFIMPVMMGGLVNYFIPVMAGFPDMVFPR 99
Score = 37.9 bits (84), Expect = 0.22
Identities = 19/44 (43%), Positives = 25/44 (56%)
Frame = +1
Query: 511 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFLILLEGG 642
LF+ A ITA AG +T++L DRN NTSF ++ GG
Sbjct: 186 LFIWAALITAILLIITLPVLAGGVTLILCDRNFNTSFYDVVGGG 229
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 40.7 bits (91), Expect = 0.031
Identities = 20/40 (50%), Positives = 30/40 (75%)
Frame = +2
Query: 317 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 436
+E G+GTG T+YPPLS+++++ G +D IF L AGI+S
Sbjct: 126 LEIGSGTGWTLYPPLSTSLSNVG--IDFIIFGLLAAGIAS 163
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 39.1 bits (87), Expect = 0.095
Identities = 21/37 (56%), Positives = 24/37 (64%)
Frame = +2
Query: 326 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 436
G G G T+YPPLS G VD +FSLHLAG+SS
Sbjct: 217 GCGIGWTLYPPLSI-WEGSGFGVDYLMFSLHLAGVSS 252
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 38.7 bits (86), Expect = 0.13
Identities = 21/57 (36%), Positives = 25/57 (43%)
Frame = +3
Query: 84 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 254
EL PG I D YN T H N ++PL+LGA D+AFPR
Sbjct: 70 ELLTPGPTIMDAMTYNRTFTLHGLVMIFLFMIPAIPAVFGNFMLPLMLGAKDVAFPR 126
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 38.7 bits (86), Expect = 0.13
Identities = 19/57 (33%), Positives = 30/57 (52%)
Frame = +3
Query: 84 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 254
EL +PG + + YN+++T+H N L+PL++GA D+AFPR
Sbjct: 122 ELADPGMTVISNTFYNSLLTSHGITMLFLFATPIIAAFS-NYLIPLLIGADDMAFPR 177
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 38.7 bits (86), Expect = 0.13
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +2
Query: 248 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGR-SVDLAIFSLHLA 424
P IN+I E G GTG T+YPPLS+++ +VD+ IF L ++
Sbjct: 100 PRINSISLLLQPIAFVLVILSTAAEFGGGTGWTLYPPLSTSLMSLSPVAVDVIIFGLLVS 159
Query: 425 GISS 436
G++S
Sbjct: 160 GVAS 163
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 37.9 bits (84), Expect = 0.22
Identities = 18/53 (33%), Positives = 26/53 (49%)
Frame = +3
Query: 96 PGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 254
PG + D + YN ++T H N L+PL++GA D+AFPR
Sbjct: 2 PGMQVVDFKTYNYLLTGHGVGMLFWWAIAAHIGGFGNFLLPLMIGAKDVAFPR 54
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 37.5 bits (83), Expect = 0.29
Identities = 19/57 (33%), Positives = 26/57 (45%)
Frame = +3
Query: 84 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 254
EL PG I D YN + T H N L+P+++GA D+AFP+
Sbjct: 63 ELLTPGPTIMDAMTYNRMFTLHGVVMIFLFMIPAIPSGFGNFLLPIMIGAKDVAFPK 119
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 36.7 bits (81), Expect = 0.51
Identities = 20/36 (55%), Positives = 24/36 (66%)
Frame = +2
Query: 329 AGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 436
A G T YPPLSS SV+ ++FSLHLAGI+S
Sbjct: 112 ASAGWTFYPPLSS----LSPSVEFSVFSLHLAGIAS 143
>UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1;
Kluyveromyces thermotolerans|Rep: Putative DNA
endonuclease - Kluyveromyces thermotolerans (Yeast)
Length = 542
Score = 36.7 bits (81), Expect = 0.51
Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Frame = +3
Query: 84 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR* 257
EL PG+ L G+ Q++N +V HA N L+PL++GA D++F R
Sbjct: 39 ELAAPGNQYLGGNHQLFNVLVVGHAVLMIFFLVMPALIGGFGNYLLPLMIGASDMSFARL 98
Query: 258 II*DFDSYPPPL 293
F PP L
Sbjct: 99 NNISFWLLPPAL 110
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 35.5 bits (78), Expect = 1.2
Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Frame = +3
Query: 84 ELGNPGSLIGDD-QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 254
EL G I DD +YNT + H N +PL++GA D+AFPR
Sbjct: 42 ELSQIGPTITDDPSVYNTWLYFHGAAMILAFQIPALTGFFANYFIPLMIGAKDVAFPR 99
>UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1;
Tetragona dorsalis ziegleri|Rep: Cytochrome c oxidase
subunit I - Tetragona dorsalis ziegleri
Length = 111
Score = 35.1 bits (77), Expect = 1.5
Identities = 19/46 (41%), Positives = 24/46 (52%)
Frame = +1
Query: 511 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFLILLEGGRP 648
LF ++ IT AG IT+LL+DRN N F IL+ G P
Sbjct: 16 LFSWSISITVNLSILSLPMLAGTITMLLSDRNFNKFFFILIGGEYP 61
>UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1;
Pachymerium ferrugineum|Rep: Cytochrome oxidase subunit
I - Pachymerium ferrugineum
Length = 219
Score = 34.7 bits (76), Expect = 2.0
Identities = 21/55 (38%), Positives = 26/55 (47%)
Frame = +1
Query: 253 DK*YKILTPTPLPYIINFKKNCRKWCRNRMNSLPPTFI*YRT*RKIRRSCYFFTT 417
+K +KIL TPL Y N C K C + +NSLP Y T R +F T
Sbjct: 81 NKQFKILIITPLTYTTNSIYGCSKRCSHSVNSLPAPCCKYLTLGPFRSYNHFCPT 135
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 33.5 bits (73), Expect = 4.7
Identities = 16/35 (45%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Frame = +2
Query: 335 TG*TVYPPLSSNIAHR-GRSVDLAIFSLHLAGISS 436
+G T+YPPLS+ A G ++DL++ +H+ GISS
Sbjct: 135 SGWTLYPPLSTRDADNIGVNIDLSLLVVHVLGISS 169
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 33.1 bits (72), Expect = 6.2
Identities = 18/57 (31%), Positives = 27/57 (47%)
Frame = +3
Query: 84 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 254
EL P + + D +YN + T H N L+P ++GAPD+AFP+
Sbjct: 64 ELITPPADLVDPSVYNGLYTMHGTVMLFLFLFPILNGFN-NLLIPTMIGAPDMAFPK 119
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 32.7 bits (71), Expect = 8.2
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +2
Query: 329 AGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 436
AG G T Y PLS+N+ G L + ++ + G+SS
Sbjct: 155 AGAGWTTYTPLSTNVGMPGMGQTLVVAAIFVTGVSS 190
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 32.7 bits (71), Expect = 8.2
Identities = 19/58 (32%), Positives = 27/58 (46%)
Frame = +3
Query: 81 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 254
AEL PG ++ +N + T H N ++PL +GAPD+AFPR
Sbjct: 65 AELFTPGLQFLSNEQFNQLFTMHGTVMLLLYGTPIVWGFA-NYVLPLQIGAPDVAFPR 121
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 490,469,273
Number of Sequences: 1657284
Number of extensions: 7607178
Number of successful extensions: 16435
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 15702
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16384
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 51239674196
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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