Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021297
         (686 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY263176-1|AAP78791.1|  705|Anopheles gambiae TmcB-like protein ...    27   0.55 
AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein pr...    24   3.9  
AY534995-1|AAT07393.1|  461|Anopheles gambiae XK-related protein.      24   5.2  
DQ383732-1|ABD47743.1|  201|Anopheles gambiae IAP-antagonist mic...    23   6.8  
CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein ...    23   6.8  
AY214334-1|AAP69612.1|  519|Anopheles gambiae nicotinate phospho...    23   9.0  
AJ549085-1|CAD70159.1|  529|Anopheles gambiae thioredoxin-disulf...    23   9.0  
AJ549084-1|CAD70158.1|  505|Anopheles gambiae thioredoxin-disulf...    23   9.0  
AJ459821-1|CAD30858.1|  502|Anopheles gambiae thioredoxin reduct...    23   9.0  

>AY263176-1|AAP78791.1|  705|Anopheles gambiae TmcB-like protein
           protein.
          Length = 705

 Score = 27.1 bits (57), Expect = 0.55
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = -1

Query: 164 YGEKIARYFMFLCRLLRLNMCI 99
           +G +I+ YF FL RLL LN+ +
Sbjct: 116 FGSRISAYFKFLRRLLVLNLVL 137


>AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein
           protein.
          Length = 476

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 10/41 (24%), Positives = 19/41 (46%)
 Frame = +1

Query: 4   ISSHIKKICMGDSTHCIKQLCFINNDQ*LRLNIHIFNLNNL 126
           +  H +K  M      +K+LC    D+   +  H+F ++ L
Sbjct: 84  LQKHHQKTTMSTKVSLLKKLCKAEYDESGDMEAHLFRMDEL 124


>AY534995-1|AAT07393.1|  461|Anopheles gambiae XK-related protein.
          Length = 461

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +3

Query: 309 KTHCHCAKTYRH 344
           KT+CHCA+   H
Sbjct: 30  KTNCHCARNLSH 41


>DQ383732-1|ABD47743.1|  201|Anopheles gambiae IAP-antagonist
           michelob_x protein.
          Length = 201

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 15/47 (31%), Positives = 20/47 (42%), Gaps = 1/47 (2%)
 Frame = +1

Query: 370 PVLKTRMKRTGPHPNQYLWPLVTAATFLENQ-STSGSEVPQSQEHHH 507
           P   T    T   P   + P  T  T + +  S +GS   Q Q+HHH
Sbjct: 72  PNAATVTAATPQPPAASMPPSTTTNTQIPSMVSAAGSTQQQHQQHHH 118


>CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein
           protein.
          Length = 615

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +2

Query: 461 NPLQGQRFHNHRSIT 505
           NP +GQ FH+ R IT
Sbjct: 254 NPQRGQNFHDARIIT 268


>AY214334-1|AAP69612.1|  519|Anopheles gambiae nicotinate
           phosphoribosyltransferase-like protein protein.
          Length = 519

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = +2

Query: 446 LFWRTNPLQGQ 478
           LF+RTNP QG+
Sbjct: 19  LFFRTNPFQGE 29


>AJ549085-1|CAD70159.1|  529|Anopheles gambiae thioredoxin-disulfide
           reductase protein.
          Length = 529

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -2

Query: 265 RRNIKTSCHFIQNHLESCNW 206
           R +  T    +QNH++S NW
Sbjct: 122 RHDWATLTESVQNHIKSVNW 141


>AJ549084-1|CAD70158.1|  505|Anopheles gambiae thioredoxin-disulfide
           reductase protein.
          Length = 505

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -2

Query: 265 RRNIKTSCHFIQNHLESCNW 206
           R +  T    +QNH++S NW
Sbjct: 98  RHDWATLTESVQNHIKSVNW 117


>AJ459821-1|CAD30858.1|  502|Anopheles gambiae thioredoxin reductase
           protein.
          Length = 502

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -2

Query: 265 RRNIKTSCHFIQNHLESCNW 206
           R +  T    +QNH++S NW
Sbjct: 95  RHDWATLTESVQNHIKSVNW 114


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 787,023
Number of Sequences: 2352
Number of extensions: 16466
Number of successful extensions: 28
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69413730
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)