Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021294
         (745 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    24   1.5  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    23   3.4  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   7.9  

>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = +3

Query: 576 FERQWTAHGGPAYAPPP 626
           F +Q TA  GP YAP P
Sbjct: 65  FVKQQTAPHGPPYAPHP 81


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -3

Query: 488 ARSSTGVLSGCSSICRATYCPSK 420
           A  + GV  GC    R+ YC +K
Sbjct: 65  AGKNRGVTEGCDYPWRSNYCDNK 87


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = +3

Query: 102 KHDLSKWKYSELRDTINTSCDI 167
           +  +SK+K++EL   +  SCD+
Sbjct: 197 EESISKYKHAELVMPLCKSCDL 218


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,971
Number of Sequences: 336
Number of extensions: 1539
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19819879
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)