Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021292
(691 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_21443| Best HMM Match : Mito_carr (HMM E-Value=2.8e-26) 147 6e-36
SB_49149| Best HMM Match : Mito_carr (HMM E-Value=4.7e-22) 50 2e-06
SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45) 46 4e-05
SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23) 45 5e-05
SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 7e-05
SB_22047| Best HMM Match : Mito_carr (HMM E-Value=0) 40 0.001
SB_32253| Best HMM Match : Mito_carr (HMM E-Value=1.6e-31) 39 0.003
SB_51922| Best HMM Match : Mito_carr (HMM E-Value=0) 39 0.004
SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0) 38 0.006
SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0) 37 0.018
SB_51010| Best HMM Match : Mito_carr (HMM E-Value=0) 35 0.054
SB_25734| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.054
SB_31912| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.094
SB_4905| Best HMM Match : Mito_carr (HMM E-Value=3.3e-13) 34 0.094
SB_46795| Best HMM Match : Mito_carr (HMM E-Value=0) 34 0.12
SB_8951| Best HMM Match : Mito_carr (HMM E-Value=0) 34 0.12
SB_54004| Best HMM Match : Mito_carr (HMM E-Value=0) 33 0.17
SB_46794| Best HMM Match : Mito_carr (HMM E-Value=1.12104e-44) 33 0.22
SB_16877| Best HMM Match : Mito_carr (HMM E-Value=0) 33 0.29
SB_22788| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.88
SB_19190| Best HMM Match : Peptidase_A17 (HMM E-Value=0) 31 0.88
SB_26166| Best HMM Match : Mito_carr (HMM E-Value=0) 31 1.2
SB_42958| Best HMM Match : Mito_carr (HMM E-Value=4.60046e-42) 30 1.5
SB_27773| Best HMM Match : Mito_carr (HMM E-Value=0) 30 2.0
SB_27933| Best HMM Match : Mito_carr (HMM E-Value=6.9e-17) 29 2.7
SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0) 29 2.7
SB_402| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_25940| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_47003| Best HMM Match : Mito_carr (HMM E-Value=2.3e-29) 29 3.6
SB_13937| Best HMM Match : zf-CCCH (HMM E-Value=0.0017) 29 3.6
SB_5442| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_46203| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7
SB_18294| Best HMM Match : Ctr (HMM E-Value=0.0092) 29 4.7
SB_48488| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_10272| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_55282| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.2
SB_52834| Best HMM Match : Mito_carr (HMM E-Value=6.7e-34) 28 8.2
SB_51941| Best HMM Match : fn3 (HMM E-Value=2.1e-11) 28 8.2
>SB_21443| Best HMM Match : Mito_carr (HMM E-Value=2.8e-26)
Length = 205
Score = 147 bits (357), Expect = 6e-36
Identities = 64/87 (73%), Positives = 78/87 (89%)
Frame = +3
Query: 255 VLSCGLTHTAVVPLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSM 434
+LSCGLTHTAVVPLDLVKCR+QVD +KY ++VNGFK++++E+GVRGLA+GWAPTFIGYSM
Sbjct: 63 ILSCGLTHTAVVPLDLVKCRIQVDPKKYGSMVNGFKITLKEDGVRGLARGWAPTFIGYSM 122
Query: 435 QGLCKFGFYEVFKVAYAGMLDDETATL 515
QGL KFGFYEVFK+ Y ML +E + L
Sbjct: 123 QGLGKFGFYEVFKIMYGNMLGEEYSYL 149
Score = 59.3 bits (137), Expect = 3e-09
Identities = 31/64 (48%), Positives = 38/64 (59%)
Frame = +1
Query: 64 MFSSLLDAARNSPFRGPLSPAQCQSTVAPVAIEQTGGMAASAAVPTESCEFGSPKYFALC 243
MFS + A+NS PLS A+C S V + + + ASAA SCEFGS KY+ALC
Sbjct: 1 MFSRYFETAKNSTLGDPLSVAKCPSDVR--SHRNSSRLMASAAGEQHSCEFGSAKYYALC 58
Query: 244 GVGG 255
G GG
Sbjct: 59 GFGG 62
Score = 51.2 bits (117), Expect = 8e-07
Identities = 27/51 (52%), Positives = 35/51 (68%)
Frame = +2
Query: 521 TFVYLAASASAEFIADIALSPWRRLRSVSKPCLVFASTLREAWPKMVKNEG 673
T +YLAASASAEF ADIAL+P ++ + +A TLRE PK++K EG
Sbjct: 152 TSLYLAASASAEFFADIALAPMEAVKVRIQTQPGWAGTLREGVPKLMKEEG 202
>SB_49149| Best HMM Match : Mito_carr (HMM E-Value=4.7e-22)
Length = 95
Score = 50.0 bits (114), Expect = 2e-06
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Frame = +3
Query: 291 PLDLVKCRLQV-DAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFGFYEV 467
PLD+V+ RL + +KY ++N F R+EG+R +G+ PT IG F YE
Sbjct: 9 PLDMVRARLAITQKKKYTGLINAFTRIYRDEGMRTFYRGYVPTLIGIMPYAGISFFTYET 68
Query: 468 FKVAYAGMLDDETAT 512
K A+ D + T
Sbjct: 69 CKKAFGEFYDGKKPT 83
>SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45)
Length = 773
Score = 45.6 bits (103), Expect = 4e-05
Identities = 30/79 (37%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Frame = +3
Query: 270 LTHTAVVPLDLVKCRLQVDAE----KYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQ 437
+ + PLD+V+ R+Q++ KY + +GFKV VR EG GL KG P + +
Sbjct: 694 VAQSGTYPLDVVRRRMQMERGEGMFKYSSTWDGFKVIVRSEGFIGLFKGMWPNLLKVAPT 753
Query: 438 GLCKFGFYEVFKVA-YAGM 491
+F YEV K A YA M
Sbjct: 754 IGIQFAVYEVSKSAMYARM 772
>SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23)
Length = 1026
Score = 45.2 bits (102), Expect = 5e-05
Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 6/88 (6%)
Frame = +3
Query: 279 TAVVPLDLVKCRLQ-----VDAEK-YKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQG 440
TAV P+DLVK R+Q ++AEK YKN ++ F VR EG GL +G P +G S +
Sbjct: 929 TAVYPIDLVKTRMQNQRAVLEAEKVYKNSIDCFFKVVRNEGPIGLYRGLLPQLLGVSPEK 988
Query: 441 LCKFGFYEVFKVAYAGMLDDETATLTVP 524
K + + G+ D+ +++P
Sbjct: 989 AIKLTTNDFVR----GIFSDDDGFISLP 1012
>SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 453
Score = 44.8 bits (101), Expect = 7e-05
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Frame = +3
Query: 267 GLTHTAVVPLDLVKCRLQVDAEKYK--NVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQG 440
G++ TA PLD +K LQV A +V+GFK+ +RE G++ L +G I + +
Sbjct: 148 GVSRTATAPLDRLKVLLQVQASSTNRFGIVSGFKMMLREGGIKSLWRGNGANVIKIAPES 207
Query: 441 LCKFGFYEVFK 473
KF YE K
Sbjct: 208 GIKFFAYEKAK 218
Score = 37.9 bits (84), Expect = 0.008
Identities = 19/80 (23%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Frame = +3
Query: 273 THTAVVPLDLVKCRLQV-DAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCK 449
+ T++ PL+++K RL + +Y+ +++ V ++EG+R +G P+ +G
Sbjct: 244 SQTSIYPLEVLKTRLAIRKTGQYRGLLHAASVIYQKEGIRSFYRGLFPSLLGIIPYAGID 303
Query: 450 FGFYEVFKVAYAGMLDDETA 509
YE K Y +++A
Sbjct: 304 LAVYETLKNFYLNYHKNQSA 323
Score = 34.7 bits (76), Expect = 0.071
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Frame = +3
Query: 261 SCGLTHTAVVPLDLVKCRLQVDAEKY-----KNVVNGFKVSVREEGVRGLAKGWAPTFI 422
+CG A PL LV+ RLQ A + N+V+ + + E+G +GL +G AP F+
Sbjct: 339 TCG--QLASYPLSLVRTRLQAQAREKGGGQGDNMVSVLRKIITEDGFKGLYRGLAPNFL 395
>SB_22047| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 421
Score = 40.3 bits (90), Expect = 0.001
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +3
Query: 279 TAVVPLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGWAPTF 419
T P D++K R+ + Y+ V F ++V EG+ L KGW PT+
Sbjct: 316 TISTPADVIKTRIMNNPSGYQGAVECFMLAVHREGLLSLYKGWLPTW 362
Score = 29.1 bits (62), Expect = 3.6
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 8/49 (16%)
Frame = +3
Query: 291 PLDLVKCRLQVDAEKY--------KNVVNGFKVSVREEGVRGLAKGWAP 413
P DLVK ++Q++ + + + F+ V + G RGL KGW P
Sbjct: 151 PTDLVKVQMQMEGRRLSFYPISSVRGTFHAFRNIVDKYGFRGLWKGWLP 199
>SB_32253| Best HMM Match : Mito_carr (HMM E-Value=1.6e-31)
Length = 233
Score = 39.1 bits (87), Expect = 0.003
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = +3
Query: 291 PLDLVKCRLQVDAEK--YKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFGFYE 464
P +L+K RLQV + Y ++ F +R EGVRGL KG+ + G G C YE
Sbjct: 35 PANLIKIRLQVQRKTTLYNGSLDAFTKVIRTEGVRGLYKGYLVSCAGL-FAGQCYITTYE 93
Query: 465 VFK 473
+ +
Sbjct: 94 LVR 96
>SB_51922| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 200
Score = 38.7 bits (86), Expect = 0.004
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 6/78 (7%)
Frame = +3
Query: 258 LSCGLTHTAVVPLDLVKCRLQV-----DAEKYKNVVNGFKVSVREEGV-RGLAKGWAPTF 419
L+ + T PLD+V+ R+Q+ D KY +N F E+G+ RGL +G + +
Sbjct: 115 LAGATSQTLAYPLDVVRRRMQLAGTVADGHKYSTCINTFISVYTEDGIRRGLYRGLSINY 174
Query: 420 IGYSMQGLCKFGFYEVFK 473
+ Q F YEV K
Sbjct: 175 LRVCPQVAVMFAVYEVVK 192
>SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 262
Score = 38.7 bits (86), Expect = 0.004
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Frame = +3
Query: 258 LSCGLTHTAVVPLDLVKCRLQVDAEK----YKNVVNGFKVSVREEGVRGLAKGWAPTFI 422
L+ ++ TA PLD+V+ R+Q+ + YK+ ++ F V+ EG RGL KG P +
Sbjct: 170 LAGAVSQTATYPLDVVRRRMQMKGIRADFAYKSTLHAFSSIVKLEGFRGLYKGMWPNIL 228
Score = 34.7 bits (76), Expect = 0.071
Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Frame = +3
Query: 270 LTHTAVVPLDLVKCRLQVDAE--KYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGL 443
++ T+V PL+ VK LQ+ + K+K V+ +EEG+ G KG I
Sbjct: 47 VSRTSVSPLERVKILLQIQVKNPKFKGVLPTLIQIGKEEGILGYFKGNGTNVIRIFPYSA 106
Query: 444 CKFGFYEVFKVAYA 485
+F YE +K A
Sbjct: 107 VQFAAYEEYKKGIA 120
>SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 264
Score = 38.3 bits (85), Expect = 0.006
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Frame = +3
Query: 270 LTHTAVVPLDLVKCRLQV-----DAEKYKNVVNGFKVSVREEGVR-GLAKGWAPTFIGYS 431
++ T PLD+V+ R+Q+ D KY +N +++G+R GL +G + ++
Sbjct: 185 VSQTIAYPLDVVRRRMQLAGAVPDGHKYNTCINTLVNVYKDDGIRRGLYRGLSINYLRVC 244
Query: 432 MQGLCKFGFYEVFK 473
Q FG YEV K
Sbjct: 245 PQVAIMFGVYEVTK 258
Score = 32.7 bits (71), Expect = 0.29
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Frame = +3
Query: 267 GLTHTAVV-PLDLVKCRL--QVDAEK-YKNVVNGFK-VSVREEGVRGLAKGWAPTFIGYS 431
G+T A PLD+V+ RL QV ++ Y + + +SV+E G + L KG+ PT + +
Sbjct: 75 GMTACACTYPLDMVRSRLAFQVAQDQGYTTITQTIRCISVKEGGPKALYKGFVPTLL--T 132
Query: 432 MQGLCKFGFYEVFKVAYAGMLDDETA 509
+ GFY +F+ A L+ A
Sbjct: 133 IVPAMGIGFY-MFETMKAYFLETRIA 157
>SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 375
Score = 36.7 bits (81), Expect = 0.018
Identities = 30/88 (34%), Positives = 42/88 (47%), Gaps = 5/88 (5%)
Frame = +3
Query: 285 VVPLDLVKCRLQVDAEK-----YKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCK 449
V P +++K RL V YK + + K +REEG+ L KG P+F+G
Sbjct: 170 VYPCEVIKTRLTVQHVNKSNAHYKGMRHALKTILREEGILALYKGVTPSFLGL------- 222
Query: 450 FGFYEVFKVAYAGMLDDETATLTVPSCT 533
F F +AY +LD +T T PS T
Sbjct: 223 FPFAGGSFLAYQ-ILDKVDSTRTEPSAT 249
>SB_51010| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 306
Score = 35.1 bits (77), Expect = 0.054
Identities = 28/90 (31%), Positives = 41/90 (45%), Gaps = 15/90 (16%)
Frame = +3
Query: 291 PLDLVKCRLQVDAEK--------------YKNVVN-GFKVSVREEGVRGLAKGWAPTFIG 425
P+++VK R+Q+D E YK ++ G REEGVRGL +G P +
Sbjct: 26 PIEVVKIRMQLDNELGSKHNSKDIFRERYYKGLIRTGLSRVYREEGVRGLYRGIFPALLR 85
Query: 426 YSMQGLCKFGFYEVFKVAYAGMLDDETATL 515
++ + G YE K G D +A L
Sbjct: 86 QAIYSSTRLGAYEPIK-NLLGATDSTSAAL 114
Score = 33.1 bits (72), Expect = 0.22
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Frame = +3
Query: 258 LSCGLTHTAVV-PLDLVKCRLQV----DAEKYKNVVNGFKVSVREEGVRGLAKGWAPT 416
+S G+ +A+ P DLVK R Q + YKN+ + F ++EG GL G PT
Sbjct: 122 VSSGVIGSAIATPTDLVKIRFQAVKIGETIPYKNMFHAFYKIAKKEGFLGLWTGMKPT 179
Score = 29.9 bits (64), Expect = 2.0
Identities = 23/86 (26%), Positives = 38/86 (44%), Gaps = 8/86 (9%)
Frame = +3
Query: 258 LSCGLTHTAVV-PLDLVKCRLQVDAEK-------YKNVVNGFKVSVREEGVRGLAKGWAP 413
L G T V P+D+V+ R + Y+ ++ +VR EG+ L KG+ P
Sbjct: 219 LVAGFVATCVASPVDIVRTRFMTQPKDTKGRPLVYQGTLDCIYKTVRHEGILALYKGFFP 278
Query: 414 TFIGYSMQGLCKFGFYEVFKVAYAGM 491
+ + + F YE + YAG+
Sbjct: 279 NWTRTGLDTIIIFFVYERLR-RYAGL 303
>SB_25734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1938
Score = 35.1 bits (77), Expect = 0.054
Identities = 22/53 (41%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +3
Query: 312 RLQVDA-EKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFGFYEV 467
R + DA +K GF ++ +EEG L K T YS++GL KF FYEV
Sbjct: 909 RTKPDATDKVYGEFQGFNITYKEEGGGTLYKTADHTKRSYSIKGLKKFTFYEV 961
>SB_31912| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 34.3 bits (75), Expect = 0.094
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 11/64 (17%)
Frame = +3
Query: 258 LSCGLTHTAVVPLDLVKCRLQVDA-----------EKYKNVVNGFKVSVREEGVRGLAKG 404
LS ++ ++P D++K R+QV ++Y V + F+ ++EEG GL KG
Sbjct: 38 LSGMISKAVILPFDIIKKRIQVQGFEEARQSFGRVQQYDGVKDCFRTILKEEGAMGLFKG 97
Query: 405 WAPT 416
AP+
Sbjct: 98 LAPS 101
>SB_4905| Best HMM Match : Mito_carr (HMM E-Value=3.3e-13)
Length = 577
Score = 34.3 bits (75), Expect = 0.094
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 8/68 (11%)
Frame = +3
Query: 243 RSWWVLSCGLTHTAVV---PLDLVKCRLQVDAEK-----YKNVVNGFKVSVREEGVRGLA 398
R W ++ T A+V P +++K RL V YK + + K +REEG+ L
Sbjct: 422 RDWSLVGTSSTLIAMVTVYPCEVIKTRLTVQHVNKSNAHYKGMRHALKTILREEGILALY 481
Query: 399 KGWAPTFI 422
KG P+F+
Sbjct: 482 KGVTPSFL 489
>SB_46795| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 328
Score = 33.9 bits (74), Expect = 0.12
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Frame = +3
Query: 228 IFRSLRSWWVLSCGLTHTAVVPLDLVKCRLQVD----AEKYKNVVNGFKVSVREEGVRGL 395
+ RSL + + T + PLD VKC LQ++ Y V+ + RE GVRG+
Sbjct: 137 LLRSLAAGMIAGVA-TSFVLTPLDRVKCILQIEKAFGGSSYGGPVDCLRRIYREAGVRGV 195
Query: 396 AKGWAPT 416
KG + T
Sbjct: 196 YKGISVT 202
>SB_8951| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 434
Score = 33.9 bits (74), Expect = 0.12
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 7/79 (8%)
Frame = +3
Query: 261 SCGLTHTAVV-PLDLVKCRLQVDAEKYKNVVN--GFKVSVR----EEGVRGLAKGWAPTF 419
+ G+ TA PLD+V+ RL V +++ N G ++R EEG+RGL KG P+
Sbjct: 37 TAGVVATASTHPLDVVRARLTVQDMSTRSISNYTGIVSALRRIHIEEGIRGLYKGLVPSL 96
Query: 420 IGYSMQGLCKFGFYEVFKV 476
+ + + Y++ K+
Sbjct: 97 VSIAPFLGVQQSVYDIMKL 115
>SB_54004| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 309
Score = 33.5 bits (73), Expect = 0.17
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Frame = +3
Query: 258 LSCGLTHTAV-VPLDLVKCRLQVDAEKYKNVVNGFKVSVR----EEGVRGLAKGWAPTFI 422
L CG + + P + +KC LQV+A + +G V+ EEGVRG+ +G PT I
Sbjct: 128 LFCGFCVSFLFAPAERIKCILQVEAGASGSTQSGPYAIVKRIYAEEGVRGIFRGLPPTMI 187
Score = 32.3 bits (70), Expect = 0.38
Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 7/45 (15%)
Frame = +3
Query: 291 PLDLVKCRLQV-------DAEKYKNVVNGFKVSVREEGVRGLAKG 404
PLDL+K RLQ + +K ++ F +VR EG+RGL KG
Sbjct: 40 PLDLLKVRLQAMNQVKPGETAPFKGAMDCFMKTVRLEGLRGLYKG 84
>SB_46794| Best HMM Match : Mito_carr (HMM E-Value=1.12104e-44)
Length = 192
Score = 33.1 bits (72), Expect = 0.22
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 5/69 (7%)
Frame = +3
Query: 273 THTAVVPLDLVKCRLQ----VDAE-KYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQ 437
T A +P+D+ K R+Q +D + +YK ++ VR EGV L KG+ P +
Sbjct: 107 TTVASMPVDIAKTRIQNMRIIDGKPEYKGTMDVLARIVRNEGVFALWKGFTPYYFRIGPH 166
Query: 438 GLCKFGFYE 464
+ F F E
Sbjct: 167 TVLTFIFLE 175
>SB_16877| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 1024
Score = 32.7 bits (71), Expect = 0.29
Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Frame = +3
Query: 270 LTHTAVVPLDLVKCRLQVDAEKYKNVVNGFKV---SVREEGVRGLAKGWAPTFIGYSMQG 440
+ HT PL +K RLQ++ + + FK+ + + EG+R +G +++G S +
Sbjct: 847 INHTVTNPLWFIKTRLQLENQGGTR-ASAFKIVSMAYKAEGIRAFYRGLTASYVGIS-ET 904
Query: 441 LCKFGFYEVFK 473
+ F YE K
Sbjct: 905 VVHFTIYERLK 915
>SB_22788| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 31.1 bits (67), Expect = 0.88
Identities = 14/53 (26%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = +1
Query: 502 RPLHLPYLRVPGGVCVGGIHRRHRPVAMEAAKVRIQTMPG-FREHPPRSVAED 657
+P ++ ++ +PGG C G + + +I M F EHP R + +D
Sbjct: 202 KPPYVCFVTLPGGSCFGSFQPCPTKAEAKRSAAKIALMNSVFNEHPSRKITDD 254
>SB_19190| Best HMM Match : Peptidase_A17 (HMM E-Value=0)
Length = 1829
Score = 31.1 bits (67), Expect = 0.88
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = -3
Query: 251 PTPQRAKYLGDPNSQDSVGTAADAAMPPVCSIATGATVDWHWAGDSG 111
P P RA L P + S G+ A+ A PP +ATG + + SG
Sbjct: 816 PPPGRASQL--PLQEQSSGSRAEEASPPPALVATGPSASYRLPNASG 860
>SB_26166| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 612
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/70 (21%), Positives = 30/70 (42%)
Frame = +3
Query: 255 VLSCGLTHTAVVPLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSM 434
+++ + P D+VK RLQ++ Y + + G+ GL +G P + ++
Sbjct: 531 IMAGAMASVVTQPADVVKTRLQMNPYMYPSNRAAVVAIIEAGGIEGLFRGLVPRTVRRTL 590
Query: 435 QGLCKFGFYE 464
+ YE
Sbjct: 591 MSAMAWTIYE 600
>SB_42958| Best HMM Match : Mito_carr (HMM E-Value=4.60046e-42)
Length = 247
Score = 30.3 bits (65), Expect = 1.5
Identities = 21/49 (42%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +3
Query: 279 TAVVPLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGW-APTFI 422
TA PLD +K RLQ A ++ +V+ EGVRGL KG AP +
Sbjct: 85 TAGQPLDTIKVRLQ--ASFGAGPLDMLARTVKTEGVRGLYKGMLAPVLV 131
>SB_27773| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 203
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/42 (28%), Positives = 25/42 (59%)
Frame = +3
Query: 282 AVVPLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGW 407
A+ P++++K RLQ+ Y+ V++ +EEG+R + +
Sbjct: 14 AMNPIEVIKQRLQMYGSPYRGVIHCATSVFKEEGIRAFYRSY 55
>SB_27933| Best HMM Match : Mito_carr (HMM E-Value=6.9e-17)
Length = 187
Score = 29.5 bits (63), Expect = 2.7
Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 9/68 (13%)
Frame = +3
Query: 291 PLDLVKCRLQVDAEK---------YKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGL 443
PL++VK R+Q+ E Y+NV + + EG+ + KG P I +
Sbjct: 24 PLEVVKTRMQLQGELKSRGTYSVYYRNVFHASYTIAKYEGILAMQKGLFPALIYQVIMNG 83
Query: 444 CKFGFYEV 467
+ G Y++
Sbjct: 84 TRLGSYQI 91
>SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 274
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Frame = +3
Query: 291 PLDLVKCRLQVDAE----KYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGL 443
P D++K R+Q D +YK +++ S +EEG+ +G PT + +Q L
Sbjct: 152 PFDVIKSRIQADGNLGKFRYKGMMDCALQSYKEEGMIVFTRGIWPTLLRGFLQVL 206
>SB_402| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 730
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/55 (30%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
Frame = -3
Query: 218 PNSQDSVGTAADAAMPPVCSIATGATVDWHWAGD-SGPRNGEFRAASSNEENIIM 57
P Q T A PPV +G+ D W GD S P+ + R+ N +M
Sbjct: 398 PQPQKPPATRPSATPPPVTGDESGSDYDEDWGGDWSEPKPTQSRSIVGEMRNDLM 452
>SB_25940| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 182
Score = 29.1 bits (62), Expect = 3.6
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +3
Query: 132 PVDGRARGYRADRWHGGVCCG 194
P +G+ RG+R GGVCCG
Sbjct: 91 PREGQIRGFRFVHISGGVCCG 111
>SB_47003| Best HMM Match : Mito_carr (HMM E-Value=2.3e-29)
Length = 868
Score = 29.1 bits (62), Expect = 3.6
Identities = 20/69 (28%), Positives = 31/69 (44%), Gaps = 8/69 (11%)
Frame = +3
Query: 291 PLDLVKCRLQVDAEK--------YKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLC 446
P+DL K ++QV + Y+NV + + G+RG +G + T +
Sbjct: 221 PIDLFKSKMQVQIIRAQSGAPIQYRNVFHAGYTIAQTYGIRGCYQGLSATLVRNIPANGF 280
Query: 447 KFGFYEVFK 473
FGFYE K
Sbjct: 281 FFGFYEFTK 289
>SB_13937| Best HMM Match : zf-CCCH (HMM E-Value=0.0017)
Length = 1495
Score = 29.1 bits (62), Expect = 3.6
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = +3
Query: 522 PSCTWRRLRRRNSSPTSPCRHGGG*GPYPNHAW 620
P+ TW++ + NS P P + G PN W
Sbjct: 342 PNQTWKQDQDPNSQPNQPWKQGQNSSSQPNQPW 374
Score = 28.7 bits (61), Expect = 4.7
Identities = 10/33 (30%), Positives = 16/33 (48%)
Frame = +3
Query: 522 PSCTWRRLRRRNSSPTSPCRHGGG*GPYPNHAW 620
P+ W++ + +S P P + G P PN W
Sbjct: 356 PNQPWKQGQNSSSQPNQPWKQGQNSSPQPNKPW 388
>SB_5442| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 214
Score = 29.1 bits (62), Expect = 3.6
Identities = 15/57 (26%), Positives = 26/57 (45%)
Frame = +3
Query: 291 PLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFGFY 461
P D +K ++Q KN ++ + ++EG +GL G P+ + F FY
Sbjct: 29 PFDTIKVKMQTFPSMSKNALDCGIKTFKQEGFKGLYAGTIPSLAANIAENSFLFLFY 85
>SB_46203| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 557
Score = 28.7 bits (61), Expect = 4.7
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = +1
Query: 130 CQSTVAPVAIEQTGGMAASAAVPTES 207
C ST PV +QT A+SA VPT S
Sbjct: 154 CLSTARPVTTQQTKKPASSAFVPTTS 179
>SB_18294| Best HMM Match : Ctr (HMM E-Value=0.0092)
Length = 267
Score = 28.7 bits (61), Expect = 4.7
Identities = 14/38 (36%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Frame = +3
Query: 411 PTFIGYSMQGLCKFGFYEVFK-VAYAGMLDDETATLTV 521
P+ +GYS++ C FGF K V+ + ++DD T++ T+
Sbjct: 29 PSPVGYSIRVSCSFGFIVTLKNVSGSLVIDDMTSSETL 66
>SB_48488| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 391
Score = 28.3 bits (60), Expect = 6.2
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +3
Query: 393 LAKGWAPTFIGYSMQGLCKFGFYEVFKV 476
L KGW T ++M G K+G E+ K+
Sbjct: 123 LLKGWGATSFEHAMIGAAKYGHIEIVKL 150
>SB_10272| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 522
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/45 (28%), Positives = 19/45 (42%)
Frame = +3
Query: 75 VARCGAELSVPWPTIARPVPVDGRARGYRADRWHGGVCCGTHGVL 209
+ RCG + W +P P++GR R W G C +L
Sbjct: 338 IRRCGTH-APGWMVGRQPSPIEGRVRRTVCFNWAGNCCKWRQNIL 381
>SB_55282| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1565
Score = 27.9 bits (59), Expect = 8.2
Identities = 21/59 (35%), Positives = 28/59 (47%)
Frame = -3
Query: 659 PSSATLRGGCSRKPGMVWIRTLAASMATGRCRR*IPPTQTPPGTRRYGKCSGLVVQHTG 483
PSS+ LR C+R G+ L GR PT +PP +RR+ + S V TG
Sbjct: 1218 PSSSDLRVACARISGI----DLTKWKDNGRPPGVPDPTVSPPSSRRWSEWSYTVRTVTG 1272
>SB_52834| Best HMM Match : Mito_carr (HMM E-Value=6.7e-34)
Length = 302
Score = 27.9 bits (59), Expect = 8.2
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 6/58 (10%)
Frame = +3
Query: 267 GLTHT-AVVPLDLVKCRLQV-----DAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFI 422
G+T + AV PLD++K RLQ+ Y +++ K EG+ KG P I
Sbjct: 216 GMTASVAVNPLDVIKTRLQLLNRPQGEPNYNGIIDCAKKIYSNEGLAAFYKGAVPRMI 273
>SB_51941| Best HMM Match : fn3 (HMM E-Value=2.1e-11)
Length = 155
Score = 27.9 bits (59), Expect = 8.2
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +3
Query: 312 RLQVDA-EKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFGFYEV 467
R + DA +K GF ++ +EEG L K T + GL KF +YEV
Sbjct: 78 RTKPDATDKIYGEFQGFNITYKEEGGGTLYKTTNHTTRSCIITGLKKFTYYEV 130
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,577,499
Number of Sequences: 59808
Number of extensions: 494987
Number of successful extensions: 1606
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 1470
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1599
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1793485733
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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